RnR The prediction of regulatory relationships associated with At4g40060

QueryAt4g40060
DescriptionATHB16 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 16)
RAFL IDpda07024
C.R.S
R.O.X.L.10/10 lines
P.O.X. 100.0

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Click here to extract genes up-regulated and also co-expressed.

Maroonover-expressed gene
Orangegene
Yellowmetabolite, lipid mode, GC-MS
Cyanmetabolite, polar mode, GC-MS
Bluemetabolite, LC-MS
Greenmetabolite, negative mode, CE-MS
Limegreenmetabolite, positive mode, CE-MS



Candidate elements regulated by At4g40060

Genes

Regulated gene Std.R. P.R. Co-X Gene name/alias
At4g40060 58.3 100.0 1.000 ATHB16 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 16)
At2g14590 33.8 100.0 0.014 transposable element gene
At2g05430 28.6 100.0 0.265 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PM
At2g15100 27.6 100.0 0.061 transposable element gene
At3g01630 27.4 99.9 0.040 -
At1g33920 26.4 99.9 0.433 ATPP2-A4 (Phloem protein 2-A4)
At5g48200 24.4 99.9 0.440 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P
At4g02950 23.2 99.9 0.221 ubiquitin family protein
At5g37080 22.0 99.9 0.242 transposable element gene
At3g25190 21.0 99.9 0.567 nodulin, putative
At5g57090 20.6 99.9 0.431 EIR1 (ETHYLENE INSENSITIVE ROOT 1)
At5g58850 19.5 99.9 0.150 MYB119 (MYB DOMAIN PROTEIN 119)
At4g30070 19.3 99.9 0.013 LCR59 (Low-molecular-weight cysteine-rich 59)
At1g60630 19.0 99.9 0.533 leucine-rich repeat family protein
At2g28700 18.2 99.9 0.253 AGL46 (AGAMOUS-LIKE 46)
At1g34080 18.1 99.9 0.379 transposable element gene
At3g42420 17.6 99.9 0.141 transposable element gene
At4g25250 17.4 99.9 0.354 invertase/pectin methylesterase inhibitor family protein
At4g35820 17.3 99.9 0.288 oxidoreductase, 2OG-Fe(II) oxygenase family protein
At1g04330 17.1 99.9 0.279 F:molecular_function unknown;P:biological_process unknown;C:chloroplast;P
At3g42350 17.0 99.9 0.285 transposable element gene
At3g12420 16.4 99.9 0.198 nucleic acid binding
At3g16970 16.3 99.9 0.126 self-incompatibility protein-related
At4g04430 16.3 99.9 0.023 transposable element gene
At1g15360 16.2 99.9 0.163 SHN1 (SHINE 1)
At1g76780 16.0 99.9 0.254 -
At4g04980 15.7 99.9 0.018 -
At3g22340 15.2 99.9 0.123 transposable element gene
At1g75940 15.1 99.9 0.154 ATA27
At1g05530 15.0 99.9 0.274 UGT75B2 (UDP-GLUCOSYL TRANSFERASE 75B2)
At5g23640 15.0 99.9 0.281 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P
At1g27620 14.7 99.9 0.572 transferase family protein
At2g18930 14.7 99.9 0.034 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P

Metabolites

Inst. Type Regulated metabolite Std.R. P.R. D.F. D.R. KaPPA-View KEGG Formula Mass Measured mass
GC-MS unknown 20.2 99.6 1/5 2 - - - - 119 91 193 149
GC-MS L-Asparagine 18.9 99.5 5/5 1 KPC00674 C00152 C4H8N2O3 132.0534921 83 217 114 159 116
GC-MS unknown 16.3 99.4 5/5 2 - - - - 129
GC-MS L-Serine 3TMS 15.2 99.3 5/5 1 KPC00734 C00065 C3H7NO3 105.0425931 204 218 100 147
GC-MS unknown 13.9 99.2 3/5 2 - - - - 131 117
GC-MS unknown 13.7 99.2 5/5 1 - - - - 131 204 147
GC-MS unknown 13.1 99.1 5/5 2 - - - - 147 174 221
GC-MS unknown 12.0 99.0 5/5 1 - - - - 149 177 104 121
LC-MS unknown 17.8 99.3 1/5 1.2 - - - 274.1078 275.1156
LC-MS unknown 17.0 99.3 5/5 1.3 - - - 351.1533 352.1611
LC-MS unknown 14.7 99.1 5/5 1.4 - - - 345.1435 346.1513
LC-MS unknown 11.1 98.9 1/5 1.0 - - - 418.1151 419.1229
LC-MS unknown 10.1 98.7 4/5 1.3 - - - 187.0495 188.0573
CE-MS unknown 15.9 99.4 5/5 1.3 - - - 347 348
CE-MS unknown 14.9 99.3 5/5 1.3 - - - 305 306
CE-MS unknown 12.3 99.2 5/5 1.1 - - - 309 310
CE-MS unknown 10.7 99.0 5/5 1.4 - - - 184 185
CE-MS unknown 9.9 98.9 5/5 1.2 - - - 102 103






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