RnR The prediction of regulatory relationships associated with At4g34680

QueryAt4g34680
DescriptionGATA transcription factor 3, putative (GATA-3)
RAFL IDpda08906
C.R.S
R.O.X.L.10/10 lines
P.O.X. 100.0

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Click here to extract genes up-regulated and also co-expressed.

Maroonover-expressed gene
Orangegene
Yellowmetabolite, lipid mode, GC-MS
Cyanmetabolite, polar mode, GC-MS
Bluemetabolite, LC-MS
Greenmetabolite, negative mode, CE-MS
Limegreenmetabolite, positive mode, CE-MS



Candidate elements regulated by At4g34680

Genes

Regulated gene Std.R. P.R. Co-X Gene name/alias
At4g34680 162.7 100.0 1.000 GATA transcription factor 3, putative (GATA-3)
At2g11940 40.2 100.0 0.123 transposable element gene
At2g34740 32.1 100.0 0.096 catalytic/ protein serine/threonine phosphatase
At3g60560 29.9 100.0 0.167 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P
At1g31670 23.9 99.9 0.254 copper amine oxidase, putative
At5g39420 23.3 99.9 0.022 cdc2cAt (Arabidopsis thaliana cdc2c)
At2g02000 21.0 99.9 0.182 GAD3 (glutamate decarboxylase 3)
At5g25140 20.1 99.9 0.432 CYP71B13
At1g02320 19.5 99.9 0.194 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown
At5g26870 19.1 99.9 0.249 AGL26
At1g72080 17.4 99.9 0.230 F:molecular_function unknown;P:biological_process unknown;C:chloroplast;MOFPBVA
At3g30370 17.1 99.9 0.103 -
At3g29410 16.4 99.9 0.346 terpene synthase/cyclase family protein
At4g27670 16.3 99.9 0.123 HSP21 (HEAT SHOCK PROTEIN 21)
At4g21590 16.0 99.9 0.344 ENDO3 (endonuclease 3)
At3g18200 15.3 99.9 0.297 nodulin MtN21 family protein
At3g28520 14.9 99.9 0.325 AAA-type ATPase family protein

Metabolites

Inst. Type Regulated metabolite Std.R. P.R. D.F. D.R. KaPPA-View KEGG Formula Mass Measured mass
GC-MS unknown 14.7 99.3 2/5 1 - - - - 115 147 109 199 247
GC-MS unknown 11.4 98.9 5/5 2 - - - - 319 205 115
GC-MS N-Methylalanine 10.2 98.6 5/5 2 KPC01450 C02721 C4H9NO2 103.0633285 130 89
GC-MS unknown 10.1 98.6 5/5 1 - - - - 178 161 133 118
GC-MS unknown 9.5 98.5 5/5 1 - - - - 149 164 135 305 290
LC-MS unknown 15.2 99.2 5/5 1.3 - - - 289.0822 290.0900
LC-MS unknown 9.0 98.6 1/5 1.3 - - - 361.1080 362.1158
LC-MS unknown 8.1 98.4 4/5 1.5 - - - 230.0804 231.0882
LC-MS unknown 7.6 98.2 4/5 1.5 - - - 914.2391 915.2469
LC-MS unknown 7.0 98.1 5/5 1.3 - - - 202.2173 203.2251
CE-MS unknown 40.5 99.9 5/5 1.5 - - - 489 488
CE-MS unknown 29.5 99.8 5/5 1.5 - - - 523 522
CE-MS unknown 26.9 99.7 4/5 1.3 - - - 74 73
CE-MS unknown 17.2 99.4 5/5 1.3 - - - 88 87
CE-MS unknown 13.4 99.2 5/5 1.8 - - - 174 173
CE-MS unknown 12.5 99.2 5/5 1.6 - - - 130 129
CE-MS unknown 12.1 99.1 5/5 1.8 - - - 132 131
CE-MS unknown 11.6 99.1 5/5 1.1 - - - 197 196






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