RnR The prediction of regulatory relationships associated with At4g32710

QueryAt4g32710
DescriptionATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase
RAFL IDpda06906
C.R.F
R.O.X.L.10/10 lines
P.O.X. 100.0

Jump to MassBase to obtain the original metabolomics dataset of this over-expression experiment.

Click here to show genes regulating the gene of interest.

Click here to extract genes up-regulated and also co-expressed.

Maroonover-expressed gene
Orangegene
Yellowmetabolite, lipid mode, GC-MS
Cyanmetabolite, polar mode, GC-MS
Bluemetabolite, LC-MS
Greenmetabolite, negative mode, CE-MS
Limegreenmetabolite, positive mode, CE-MS



Candidate elements regulated by At4g32710

Genes

Regulated gene Std.R. P.R. Co-X Gene name/alias
At4g32710 139.1 100.0 1.000 ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase
At4g24510 68.6 100.0 0.600 CER2 (ECERIFERUM 2)
At1g48070 55.8 100.0 0.092 -
At3g15490 52.6 100.0 0.049 F:unknown;P:biological_process unknown;C:unknown;PFOM
At1g47680 36.6 100.0 0.154 F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P
At5g52170 36.0 100.0 0.317 HDG7 (HOMEODOMAIN GLABROUS 7)
At1g63060 35.8 100.0 0.084 F:molecular_function unknown;P:biological_process unknown;C:mitochondrion;P
At3g05860 35.3 100.0 0.044 MADS-box protein (AGL45)
At1g09370 33.5 100.0 0.056 enzyme inhibitor/ pectinesterase
At1g31530 32.8 100.0 0.124 endonuclease/exonuclease/phosphatase family protein
At3g13270 32.8 100.0 0.086 transposable element gene
At3g24280 32.8 100.0 0.028 SMAP2 (small acidic protein 2)
At3g49440 32.3 100.0 0.246 F-box family protein-related
At3g25185 32.1 100.0 0.190 -
At1g11920 31.3 100.0 0.250 pectate lyase family protein
At2g44000 29.8 100.0 0.219 -
At5g52340 29.8 100.0 0.098 ATEXO70A2 (exocyst subunit EXO70 family protein A2)
At2g13730 29.6 100.0 0.155 transposable element gene
At1g60280 28.1 100.0 0.171 ANAC023 (Arabidopsis NAC domain containing protein 23)
At1g41795 27.7 100.0 0.076 transposable element gene
At3g14380 27.2 99.9 0.332 integral membrane family protein
At4g03690 26.3 99.9 0.210 transposable element gene
At4g18980 25.6 99.9 0.224 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P
At5g64770 25.5 99.9 0.300 F:molecular_function unknown;P:unknown;C:endomembrane system;P
At1g27550 24.9 99.9 0.220 F-box family protein
At1g44990 24.6 99.9 0.173 F:molecular_function unknown;P:biological_process unknown;C:endomembrane system
At1g31680 23.9 99.9 0.290 -
At4g27190 22.8 99.9 0.147 disease resistance protein (NBS-LRR class), putative
At1g57650 22.6 99.9 0.080 -
At5g54410 21.4 99.9 0.135 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMBFPVA
At4g00670 20.9 99.9 0.248 DNA binding
At1g58430 20.7 99.9 0.443 RXF26
At5g49240 20.4 99.9 0.342 APRR4 (PSEUDO-RESPONSE REGULATOR 4)
At3g42060 20.0 99.9 0.099 myosin heavy chain-related
At5g49360 19.8 99.9 0.395 BXL1 (BETA-XYLOSIDASE 1)
At1g23510 19.4 99.9 0.360 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P
At2g05500 19.3 99.9 0.085 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P
At4g36070 18.6 99.9 0.224 CPK18
At4g36170 18.4 99.9 0.239 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P
At5g05260 18.4 99.9 0.021 CYP79A2 (CYTOCHROME P450 79A2)
At1g44350 18.2 99.9 0.392 ILL6
At5g19800 18.2 99.9 0.246 hydroxyproline-rich glycoprotein family protein
At3g29787 18.0 99.9 0.107 transposable element gene
At3g51200 17.7 99.9 0.338 auxin-responsive family protein
At1g29080 17.4 99.9 0.036 peptidase C1A papain family protein
At3g23010 17.2 99.9 0.302 AtRLP36 (Receptor Like Protein 36)
At2g10400 16.7 99.9 0.081 transposable element gene
At1g37000 16.4 99.9 0.390 beta-galactosidase
At1g73050 16.1 99.9 0.342 (R)-mandelonitrile lyase, putative / (R)-oxynitrilase, putative
At2g19510 16.1 99.9 0.090 LBD8 (LOB DOMAIN-CONTAINING PROTEIN 8)
At3g01780 16.1 99.9 0.675 TPLATE
At5g26310 16.1 99.9 0.371 UGT72E3
At3g02670 16.0 99.9 0.080 proline-rich family protein
At4g03760 15.6 99.9 0.371 transposable element gene
At2g15190 15.4 99.9 0.219 transposable element gene
At4g01340 15.2 99.9 0.412 CHP-rich zinc finger protein-related
At3g05620 15.1 99.9 0.457 pectinesterase family protein
At2g33160 14.9 99.9 0.193 glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein
At3g11600 14.9 99.9 0.678 F:molecular_function unknown;P:biological_process unknown;C:unknown;P
At2g19420 14.8 99.9 0.156 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P
At2g27280 14.8 99.9 0.247 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFBPVA
At4g37850 14.7 99.9 0.238 basic helix-loop-helix (bHLH) family protein

Metabolites

Inst. Type Regulated metabolite Std.R. P.R. D.F. D.R. KaPPA-View KEGG Formula Mass Measured mass
GC-MS L-Arginine 48.0 99.9 5/5 2 KPC00670 C00062 C6H14N4O2 174.1116757 263 142
GC-MS L-Proline 42.5 99.9 5/5 1 KPC00732 C00148 C5H9NO2 115.0633285 103 172 144
GC-MS unknown 37.8 99.9 5/5 1 - - - - 128 115 100 141 243
GC-MS unknown 37.7 99.9 5/5 1 - - - - 147 110 133 187 205
GC-MS L-Proline 2TMS 21.7 99.6 5/5 1 KPC00732 C00148 C5H9NO2 115.0633285 142
GC-MS unknown 18.6 99.5 5/5 1 - - - - 129 217 260 156
GC-MS unknown 17.0 99.4 5/5 2 - - - - 97 83
GC-MS unknown 12.0 99.0 2/5 2 - - - - 91 258 253 115
LC-MS unknown 18.4 99.3 1/5 1.3 - - - 154.0293 155.0371
LC-MS unknown 16.7 99.3 1/5 1.5 - - - 419.2116 420.2194
LC-MS unknown 16.6 99.3 2/5 1.1 - - - 618.2769 619.2847
LC-MS unknown 16.1 99.2 1/5 1.2 - - - 372.1271 373.1349
LC-MS unknown 15.7 99.2 1/5 1.8 - - - 569.2158 570.2236
LC-MS unknown 13.1 99.0 2/5 1.7 - - - 551.2043 552.2121
LC-MS unknown 12.9 99.0 1/5 1.6 - - - 225.0664 226.0742
LC-MS unknown 12.3 99.0 2/5 1.3 - - - 212.0736 213.0814
CE-MS unknown 54.5 99.9 2/5 1.6 - - - 197 196
CE-MS unknown 11.3 99.1 5/5 1.6 - - - 244 243
CE-MS unknown 11.0 99.0 5/5 1.2 - - - 283 282
CE-MS unknown 10.9 99.0 1/5 1.8 - - - 146 145
CE-MS unknown 9.4 98.8 5/5 1.8 - - - 305 306






Back to the RnR portal site

Back to the KAGIANA project homepage