RnR The prediction of regulatory relationships associated with At4g29030

QueryAt4g29030
Descriptionglycine-rich protein
RAFL IDpda11049
C.R.S
R.O.X.L.10/10 lines
P.O.X. 100.0

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Click here to extract genes up-regulated and also co-expressed.

Maroonover-expressed gene
Orangegene
Yellowmetabolite, lipid mode, GC-MS
Cyanmetabolite, polar mode, GC-MS
Bluemetabolite, LC-MS
Greenmetabolite, negative mode, CE-MS
Limegreenmetabolite, positive mode, CE-MS



Candidate elements regulated by At4g29030

Genes

Regulated gene Std.R. P.R. Co-X Gene name/alias
At4g29030 214.0 100.0 1.000 glycine-rich protein
At5g57530 48.8 100.0 0.043 xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative
At1g34170 37.9 100.0 0.046 transcription factor
At5g62750 28.7 100.0 0.018 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMFBPVA
At2g13270 28.5 100.0 0.025 transposable element gene
At3g31460 28.4 100.0 0.082 transposable element gene
At2g05290 23.6 99.9 0.144 transposable element gene
At5g54370 22.5 99.9 0.014 late embryogenesis abundant protein-related / LEA protein-related
At3g05610 22.1 99.9 0.010 pectinesterase family protein
At2g06140 21.9 99.9 0.072 transposable element gene
At5g36650 21.3 99.9 0.018 transposable element gene
At3g62230 20.4 99.9 0.016 F-box family protein
At4g28380 19.7 99.9 0.059 leucine-rich repeat family protein
At2g19230 19.3 99.9 0.076 kinase
At1g04330 18.8 99.9 0.070 F:molecular_function unknown;P:biological_process unknown;C:chloroplast;P
At2g34180 18.6 99.9 0.068 CIPK13 (CBL-INTERACTING PROTEIN KINASE 13)
At5g17180 18.6 99.9 0.041 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P
At1g69160 18.4 99.9 0.345 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POFMV
At1g43320 18.2 99.9 0.058 F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P
At5g23790 18.0 99.9 0.145 AtGolS5 (Arabidopsis thaliana galactinol synthase 5)
At3g19620 17.9 99.9 0.296 glycosyl hydrolase family 3 protein
At3g48950 17.8 99.9 0.031 glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein
At5g59990 17.5 99.9 0.385 -
At1g70985 17.4 99.9 0.102 hydroxyproline-rich glycoprotein family protein
At2g25090 17.3 99.9 0.127 CIPK16 (CBL-INTERACTING PROTEIN KINASE 16)
At3g55370 17.0 99.9 0.271 OBP3 (OBF-BINDING PROTEIN 3)
At2g24000 16.7 99.9 0.126 scpl22 (serine carboxypeptidase-like 22)
At5g47850 16.5 99.9 0.021 CCR4 (ARABIDOPSIS THALIANA CRINKLY4 RELATED 4)
At5g14300 16.2 99.9 0.195 ATPHB5 (PROHIBITIN 5)
At3g30650 16.1 99.9 0.036 transposable element gene
At5g60880 16.1 99.9 0.618 F:unknown;P:unknown;C:cellular_component unknown;OPMF
At3g24790 15.9 99.9 0.050 ATP binding / kinase/ protein kinase/ protein serine/threonine kinase
At2g26160 15.8 99.9 0.076 -
At4g09360 15.8 99.9 0.237 disease resistance protein (NBS-LRR class), putative
At5g20740 15.6 99.9 0.740 invertase/pectin methylesterase inhibitor family protein
At2g43580 15.5 99.9 0.053 chitinase, putative
At4g11190 15.2 99.9 0.158 disease resistance-responsive family protein / dirigent family protein
At1g14220 15.1 99.9 0.052 ribonuclease T2 family protein
At4g07460 15.0 99.9 0.030 transposable element gene
At4g22640 14.9 99.9 0.024 -

Metabolites

Inst. Type Regulated metabolite Std.R. P.R. D.F. D.R. KaPPA-View KEGG Formula Mass Measured mass
GC-MS unknown 32.4 99.8 5/5 1 - - - - 147 110 133 187 205
GC-MS unknown 14.8 99.3 1/5 2 - - - - 106 147 217 129 271 361
GC-MS N-Acetyl-D-glucosamine 14.4 99.2 5/5 2 KPC01449 C00140 C8H15NO6 221.0899372 147 205 319 129 117
GC-MS unknown 14.0 99.2 5/5 2 - - - - 319 205 115
GC-MS unknown 13.2 99.1 5/5 1 - - - - 129 217 260 156
LC-MS unknown 14.7 99.1 1/3 1.5 - - - 447.1376 448.1454
LC-MS unknown 11.0 98.8 3/3 1.6 - - - 359.1225 360.1303
LC-MS unknown 7.9 98.3 1/3 1.6 - - - 790.2957 791.3035
LC-MS unknown 7.7 98.3 3/3 1.6 - - - 381.1054 382.1132
LC-MS unknown 6.8 98.0 1/3 2.2 - - - 123.0318 124.0396
CE-MS unknown 73.0 99.9 5/5 1.7 - - - 161 162
CE-MS unknown 63.8 99.9 5/5 1.8 - - - 85 86
CE-MS unknown 53.0 99.9 5/5 1.7 - - - 173 174
CE-MS unknown 36.4 99.8 5/5 1.2 - - - 116 115
CE-MS unknown 35.0 99.8 5/5 1.4 - - - 125 126
CE-MS unknown 33.3 99.8 5/5 1.4 - - - 323 322
CE-MS unknown 28.9 99.7 5/5 1.2 - - - 307 306
CE-MS unknown 26.2 99.7 5/5 1.3 - - - 164 163
CE-MS unknown 25.8 99.7 5/5 1.5 - - - 85 86
CE-MS unknown 21.6 99.6 5/5 1.5 - - - 304 303
CE-MS unknown 17.1 99.4 1/5 1.4 - - - 187 186
CE-MS unknown 16.8 99.4 5/5 1.8 - - - 147 148
CE-MS unknown 16.2 99.4 5/5 1.6 - - - 244 243
CE-MS unknown 13.6 99.3 5/5 1.2 - - - 185 184
CE-MS unknown 12.2 99.1 5/5 1.3 - - - 111 112
CE-MS unknown 12.0 99.1 5/5 1.7 - - - 130 129
CE-MS unknown 11.8 99.1 5/5 1.4 - - - 163 164
CE-MS unknown 11.6 99.1 5/5 1.4 - - - 173 174
CE-MS unknown 10.7 99.0 5/5 1.1 - - - 181 182
CE-MS unknown 10.3 99.0 5/5 1.8 - - - 102 101






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