RnR The prediction of regulatory relationships associated with At4g22250

QueryAt4g22250
Descriptionzinc finger (C3HC4-type RING finger) family protein
RAFL IDpda11321
C.R.C
R.O.X.L.10/10 lines
P.O.X. 100.0

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Click here to show genes regulating the gene of interest.

Click here to extract genes up-regulated and also co-expressed.

Maroonover-expressed gene
Orangegene
Yellowmetabolite, lipid mode, GC-MS
Cyanmetabolite, polar mode, GC-MS
Bluemetabolite, LC-MS
Greenmetabolite, negative mode, CE-MS
Limegreenmetabolite, positive mode, CE-MS



Candidate elements regulated by At4g22250

Genes

Regulated gene Std.R. P.R. Co-X Gene name/alias
At4g22250 128.9 100.0 1.000 zinc finger (C3HC4-type RING finger) family protein
At2g19510 44.3 100.0 0.149 LBD8 (LOB DOMAIN-CONTAINING PROTEIN 8)
At2g33870 30.3 100.0 0.094 ArRABA1h (Arabidopsis Rab GTPase homolog A1h)
At2g45890 29.7 100.0 0.421 ROPGEF4 (RHO GUANYL-NUCLEOTIDE EXCHANGE FACTOR 4)
At5g40155 25.6 99.9 0.028 -
At1g04470 23.4 99.9 0.041 -
At5g36720 21.1 99.9 0.182 F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P
At1g03720 20.6 99.9 0.391 cathepsin-related
At2g38900 19.0 99.9 0.088 serine protease inhibitor, potato inhibitor I-type family protein
At1g34842 18.8 99.9 0.413 transposable element gene
At1g80320 17.3 99.9 0.359 oxidoreductase, 2OG-Fe(II) oxygenase family protein
At1g09470 16.8 99.9 0.525 F:molecular_function unknown;P:unknown;C:unknown;MOBFPAV
At4g00416 16.7 99.9 0.271 MBD3
At3g44270 16.5 99.9 0.217 transposable element gene
At3g63020 15.5 99.9 0.415 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P
At1g07460 15.3 99.9 0.454 legume lectin family protein
At3g60650 15.3 99.9 0.419 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P
At2g19300 15.2 99.9 0.324 F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P
At4g07660 15.0 99.9 0.304 transposable element gene
At5g19640 14.6 99.9 0.442 proton-dependent oligopeptide transport (POT) family protein

Metabolites

Inst. Type Regulated metabolite Std.R. P.R. D.F. D.R. KaPPA-View KEGG Formula Mass Measured mass
GC-MS unknown 24.8 99.7 5/5 1 - - - -
GC-MS unknown 24.2 99.7 5/5 2 - - - - 85 99 113
GC-MS unknown 22.9 99.7 5/5 1 - - - - 163 91 133
GC-MS unknown 22.7 99.7 5/5 1 - - - - 94 93 91 107 121
GC-MS unknown 19.1 99.5 4/5 2 - - - -
GC-MS unknown 15.3 99.3 5/5 2 - - - -
GC-MS unknown 14.6 99.2 5/5 2 - - - - 207
GC-MS D-Trehalose 14.2 99.2 5/5 1 KPC01031 C01083 C12H22O11 342.1162115 147 103 191 361
GC-MS unknown 12.7 99.0 5/5 2 - - - -
GC-MS unknown 12.3 99.0 5/5 1 - - - - 95 82 109
GC-MS unknown 12.1 99.0 5/5 1 - - - - 87 129
GC-MS unknown 12.0 99.0 5/5 2 - - - - 147 281 327
LC-MS unknown 86.2 99.8 1/5 1.4 - - - 625.2317 626.2395
LC-MS unknown 56.9 99.7 1/5 1.7 - - - 701.2333 702.2411
LC-MS unknown 54.4 99.7 1/5 1.0 - - - 730.1832 731.1910
LC-MS unknown 40.8 99.7 3/5 1.2 - - - 1207.3341 1208.3419
LC-MS unknown 38.1 99.6 1/5 1.1 - - - 894.3319 895.3397
LC-MS unknown 36.1 99.6 4/5 1.3 - - - 910.2365 911.2443
LC-MS unknown 31.9 99.6 1/5 1.7 - - - 793.2723 794.2801
LC-MS unknown 31.2 99.6 3/5 1.6 - - - 613.1439 614.1517
LC-MS unknown 30.4 99.6 4/5 1.3 - - - 1319.9951 1321.0029
LC-MS unknown 30.1 99.6 2/5 1.5 - - - 787.2839 788.2917
LC-MS unknown 29.6 99.6 4/5 1.3 - - - 1129.3452 1130.3530
LC-MS unknown 29.2 99.5 4/5 1.5 - - - 759.2104 760.2182
LC-MS unknown 25.7 99.5 2/5 1.5 - - - 799.2813 800.2891
LC-MS unknown 22.2 99.4 1/5 1.2 - - - 1143.4272 1144.4350
LC-MS unknown 20.9 99.4 1/5 1.4 - - - 192.0521 193.0599
LC-MS unknown 20.2 99.4 5/5 1.3 - - - 1320.5038 1321.5116
LC-MS unknown 17.2 99.3 1/5 1.5 - - - 301.0607 302.0685
LC-MS unknown 17.2 99.3 2/5 1.3 - - - 447.1510 448.1588
LC-MS unknown 16.8 99.3 4/5 1.7 - - - 1060.4053 1061.4131
LC-MS unknown 15.8 99.2 4/5 1.4 - - - 539.2002 540.2080
LC-MS unknown 15.1 99.2 2/5 1.3 - - - 360.0997 361.1075
LC-MS unknown 14.4 99.1 5/5 1.6 - - - 280.0816 281.0894
LC-MS unknown 14.4 99.1 1/5 1.2 - - - 607.2255 608.2333
LC-MS unknown 14.3 99.1 4/5 1.7 - - - 799.2797 800.2875
LC-MS unknown 14.2 99.1 5/5 1.7 - - - 800.2883 801.2961
LC-MS unknown 13.1 99.0 1/5 1.6 - - - 1002.3461 1003.3539
LC-MS unknown 12.9 99.0 3/5 1.4 - - - 361.1000 362.1078
LC-MS unknown 12.8 99.0 1/5 1.3 - - - 340.1347 341.1425
LC-MS unknown 12.8 99.0 1/5 1.5 - - - 540.1359 541.1437
LC-MS unknown 12.8 99.0 5/5 1.2 - - - 764.1480 765.1558
CE-MS unknown 34.1 99.8 5/5 1.8 - - - 75 76
CE-MS unknown 12.7 99.2 5/5 1.6 - - - 73 74
CE-MS unknown 11.2 99.1 5/5 1.1 - - - 85 86
CE-MS unknown 10.9 99.0 5/5 1.5 - - - 117 118
CE-MS unknown 10.7 99.0 1/5 1.7 - - - 85 86






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