RnR The prediction of regulatory relationships associated with At4g17600

QueryAt4g17600
DescriptionLIL3:1
RAFL IDpda00871
C.R.C
R.O.X.L.14/14 lines
P.O.X. 100.0

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Click here to extract genes up-regulated and also co-expressed.

Maroonover-expressed gene
Orangegene
Yellowmetabolite, lipid mode, GC-MS
Cyanmetabolite, polar mode, GC-MS
Bluemetabolite, LC-MS
Greenmetabolite, negative mode, CE-MS
Limegreenmetabolite, positive mode, CE-MS



Candidate elements regulated by At4g17600

Genes

Regulated gene Std.R. P.R. Co-X Gene name/alias
At2g07040 70.5 100.0 0.011 PRK2A
At2g30370 62.2 100.0 0.197 allergen-related
At3g01700 61.1 100.0 0.018 AGP11
At3g52700 56.1 100.0 0.119 F:molecular_function unknown;P:biological_process unknown;C:unknown;P
At2g10610 50.9 100.0 0.035 transposable element gene
At3g11550 42.7 100.0 0.061 integral membrane family protein
At4g17600 38.6 100.0 1.000 LIL3:1
At3g50170 37.9 100.0 0.222 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P
At1g15670 35.7 100.0 0.356 kelch repeat-containing F-box family protein
At1g43950 35.7 100.0 0.178 ARF23 (AUXIN RESPONSE FACTOR 23)
At5g50880 35.2 100.0 0.065 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P
At5g56320 31.8 100.0 0.088 ATEXPA14 (ARABIDOPSIS THALIANA EXPANSIN A14)
At5g62250 30.4 100.0 0.104 MAP65-9 (MICROTUBULE-ASSOCIATED PROTEIN 65-9)
At1g02320 28.0 100.0 0.115 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown
At2g23170 27.5 100.0 0.189 GH3.3
At2g45650 26.5 99.9 0.151 AGL6 (AGAMOUS-LIKE 6)
At4g31470 26.4 99.9 0.083 pathogenesis-related protein, putative
At4g04530 25.7 99.9 0.099 transposable element gene
At1g26480 25.2 99.9 0.032 GRF12 (GENERAL REGULATORY FACTOR 12)
At2g10780 24.6 99.9 0.050 transposable element gene
At3g43680 24.5 99.9 0.242 transposable element gene
At2g07730 23.7 99.9 0.095 transposable element gene
At5g54620 23.2 99.9 0.117 ankyrin repeat family protein
At1g56090 22.8 99.9 0.688 tetratricopeptide repeat (TPR)-containing protein
At3g28550 22.7 99.9 0.111 proline-rich extensin-like family protein
At3g32300 22.7 99.9 0.315 transposable element gene
At1g03050 22.6 99.9 0.009 epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-related
At2g14810 22.4 99.9 0.097 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P
At1g41797 22.2 99.9 0.110 transposable element gene
At2g31035 21.8 99.9 0.120 -
At3g22000 21.7 99.9 0.091 receptor-like protein kinase-related
At4g29980 21.4 99.9 0.202 F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P
At3g16930 21.0 99.9 0.132 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P
At3g58780 20.8 99.9 0.067 SHP1 (SHATTERPROOF 1)
At3g05610 20.6 99.9 0.008 pectinesterase family protein
At1g29460 20.2 99.9 0.568 auxin-responsive protein, putative
At2g26410 19.8 99.9 0.015 Iqd4 (IQ-domain 4)
At5g03670 18.8 99.9 0.373 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFPVB
At4g03153 18.6 99.9 0.191 kinase interacting family protein
At1g19500 18.2 99.9 0.010 F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P
At5g60880 18.1 99.9 0.669 F:unknown;P:unknown;C:cellular_component unknown;OPMF
At3g14760 18.0 99.9 0.297 F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P
At3g18180 17.8 99.9 0.256 transferase, transferring glycosyl groups
At1g14930 16.8 99.9 0.035 major latex protein-related / MLP-related
At2g23400 16.7 99.9 0.106 dehydrodolichyl diphosphate synthase, putative / DEDOL-PP synthase, putative
At4g08150 16.5 99.9 0.301 KNAT1 (KNOTTED-LIKE FROM ARABIDOPSIS THALIANA)
At2g18540 16.3 99.9 0.175 cupin family protein
At3g27980 16.3 99.9 0.020 pectinesterase family protein
At3g24630 16.1 99.9 0.625 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMFBPV
At4g12500 16.1 99.9 0.170 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein
At1g47300 16.0 99.9 0.131 F-box family protein
At2g41380 16.0 99.9 0.206 embryo-abundant protein-related
At1g33817 15.9 99.9 0.152 transposable element gene
At2g12710 15.9 99.9 0.030 transposable element gene
At1g32650 15.8 99.9 0.041 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown
At4g13390 15.7 99.9 0.158 proline-rich extensin-like family protein
At5g40560 15.7 99.9 0.136 DegP13 (DegP protease 13)
At1g43240 15.6 99.9 0.230 transposable element gene
At4g01130 15.6 99.9 0.751 acetylesterase, putative
At1g69870 15.4 99.9 0.560 proton-dependent oligopeptide transport (POT) family protein
At3g46650 15.1 99.9 0.236 UDP-glycosyltransferase/ transferase, transferring glycosyl groups
At3g42330 15.0 99.9 0.266 transposable element gene
At4g03760 15.0 99.9 0.473 transposable element gene
At1g24370 14.9 99.9 0.185 transposable element gene
At2g19360 14.9 99.9 0.082 F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PFB
At1g28270 14.7 99.9 0.018 RALFL4 (ralf-like 4)
At2g17740 14.7 99.9 0.134 DC1 domain-containing protein
At2g24410 14.6 99.9 0.149 -
At3g42400 14.6 99.9 0.311 transposable element gene

Metabolites

Inst. Type Regulated metabolite Std.R. P.R. D.F. D.R. KaPPA-View KEGG Formula Mass Measured mass
GC-MS unknown 60.7 99.9 2/5 2 - - - - 338 368 323 353 279 249
GC-MS unknown 35.9 99.8 5/5 2 - - - - 140 147 321
GC-MS unknown 16.3 99.4 5/5 2 - - - - 91 99 153
GC-MS unknown 15.6 99.3 5/5 1 - - - - 174 86 100
GC-MS L-Arginine 14.5 99.2 5/5 1 KPC00670 C00062 C6H14N4O2 174.1116757 142 174
GC-MS unknown 12.8 99.1 5/5 2 - - - - 147 227 128 203
GC-MS unknown 12.4 99.0 5/5 1 - - - - 147 110 133 187 205
LC-MS unknown 38.6 99.6 2/5 1.3 - - - 853.3019 854.3097
LC-MS unknown 17.8 99.3 3/5 1.3 - - - 823.3259 824.3337
LC-MS unknown 16.7 99.3 3/5 1.3 - - - 338.1226 339.1304
LC-MS unknown 14.1 99.1 1/5 1.1 - - - 1024.3360 1025.3438
LC-MS unknown 10.2 98.7 4/5 1.3 - - - 212.0736 213.0814
CE-MS unknown 76.0 100.0 3/5 1.9 - - - 179 178
CE-MS unknown 49.8 99.9 5/5 1.4 - - - 130 131
CE-MS unknown 41.4 99.9 5/5 1.8 - - - 163 164
CE-MS unknown 37.7 99.8 5/5 1.8 - - - 162 163
CE-MS unknown 37.4 99.8 5/5 1.6 - - - 203 204
CE-MS unknown 36.6 99.8 5/5 2.5 - - - 243 244
CE-MS L-Lysine 36.1 99.8 5/5 1.6 KPC00717 C00047 C6H14N2O2 146.1055277 147
CE-MS unknown 34.5 99.8 5/5 1.3 - - - 184 185
CE-MS unknown 31.4 99.8 5/5 1.4 - - - 120 121
CE-MS unknown 30.8 99.8 5/5 1.2 - - - 218 219
CE-MS unknown 30.7 99.8 5/5 1.6 - - - 131 132
CE-MS unknown 29.7 99.8 5/5 1.3 - - - 173 174
CE-MS unknown 28.8 99.7 5/5 1.4 - - - 115 116
CE-MS unknown 28.8 99.7 4/5 1.6 - - - 203 204
CE-MS unknown 28.7 99.7 5/5 1.0 - - - 173 174
CE-MS unknown 28.5 99.7 5/5 1.5 - - - 136 137
CE-MS unknown 28.3 99.7 5/5 1.6 - - - 133 134
CE-MS unknown 28.0 99.7 5/5 1.6 - - - 189 190
CE-MS unknown 27.5 99.7 5/5 1.6 - - - 117 118
CE-MS unknown 27.3 99.7 5/5 1.6 - - - 203 204
CE-MS unknown 27.2 99.7 5/5 1.3 - - - 133 134
CE-MS unknown 26.9 99.7 5/5 1.5 - - - 135 136
CE-MS unknown 26.4 99.7 5/5 1.8 - - - 189 190
CE-MS unknown 26.1 99.7 5/5 1.5 - - - 161 162
CE-MS unknown 25.7 99.7 5/5 1.9 - - - 163 164
CE-MS unknown 25.1 99.7 5/5 1.5 - - - 189 190
CE-MS unknown 24.9 99.7 5/5 1.2 - - - 163 164
CE-MS unknown 24.7 99.7 5/5 1.3 - - - 331 332
CE-MS unknown 24.6 99.7 5/5 1.7 - - - 244 245
CE-MS unknown 24.5 99.7 5/5 1.8 - - - 240 241
CE-MS unknown 24.0 99.6 5/5 1.6 - - - 163 164
CE-MS unknown 23.3 99.6 5/5 1.1 - - - 125 126
CE-MS L-Methionine 22.7 99.6 5/5 1.4 KPC00719 C00073 C5H11NO2S 149.0510496 150
CE-MS unknown 22.2 99.6 5/5 1.6 - - - 161 162
CE-MS unknown 22.1 99.6 5/5 1.9 - - - 173 174
CE-MS unknown 22.0 99.6 5/5 1.5 - - - 203 204
CE-MS unknown 21.8 99.6 5/5 1.6 - - - 173 174
CE-MS unknown 21.4 99.6 5/5 1.7 - - - 121 122
CE-MS unknown 21.3 99.6 5/5 1.2 - - - 121 122
CE-MS unknown 20.8 99.6 5/5 1.3 - - - 126 127
CE-MS unknown 20.7 99.6 5/5 1.1 - - - 126 127
CE-MS unknown 20.5 99.6 5/5 1.6 - - - 160 161
CE-MS unknown 20.4 99.5 5/5 1.5 - - - 161 162
CE-MS unknown 20.1 99.5 5/5 1.3 - - - 201 202
CE-MS unknown 19.4 99.5 5/5 1.5 - - - 161 162
CE-MS unknown 19.3 99.5 5/5 1.2 - - - 155 156
CE-MS unknown 17.2 99.4 5/5 1.6 - - - 167 168
CE-MS unknown 17.2 99.4 5/5 1.2 - - - 203 204
CE-MS unknown 17.0 99.4 5/5 1.3 - - - 120 121
CE-MS unknown 16.6 99.4 5/5 1.4 - - - 161 162
CE-MS unknown 16.4 99.4 5/5 1.4 - - - 126 127
CE-MS unknown 16.0 99.4 5/5 1.0 - - - 147 148
CE-MS unknown 15.9 99.4 5/5 1.4 - - - 213 214
CE-MS unknown 14.8 99.3 5/5 1.4 - - - 131 132
CE-MS unknown 14.8 99.3 5/5 1.0 - - - 165 166
CE-MS unknown 14.7 99.3 5/5 1.1 - - - 181 182
CE-MS unknown 14.4 99.3 5/5 1.3 - - - 161 162
CE-MS unknown 13.9 99.3 5/5 1.3 - - - 173 174
CE-MS unknown 13.7 99.3 5/5 1.3 - - - 115 116
CE-MS unknown 13.3 99.2 5/5 1.5 - - - 161 162
CE-MS unknown 12.3 99.2 5/5 1.0 - - - 189 190
CE-MS unknown 11.9 99.1 5/5 1.7 - - - 213 214
CE-MS unknown 11.8 99.1 5/5 1.3 - - - 121 122
CE-MS unknown 11.7 99.1 5/5 1.2 - - - 161 162
CE-MS unknown 10.5 99.0 5/5 1.5 - - - 204 205






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