RnR The prediction of regulatory relationships associated with At4g09960

QueryAt4g09960
DescriptionSTK (SEEDSTICK)
RAFL IDpda06524
C.R.C
R.O.X.L.10/10 lines
P.O.X. 100.0

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Click here to show genes regulating the gene of interest.

Click here to extract genes up-regulated and also co-expressed.

Maroonover-expressed gene
Orangegene
Yellowmetabolite, lipid mode, GC-MS
Cyanmetabolite, polar mode, GC-MS
Bluemetabolite, LC-MS
Greenmetabolite, negative mode, CE-MS
Limegreenmetabolite, positive mode, CE-MS



Candidate elements regulated by At4g09960

Genes

Regulated gene Std.R. P.R. Co-X Gene name/alias
At4g09960 213.7 100.0 1.000 STK (SEEDSTICK)
At2g06180 127.3 100.0 0.047 transposable element gene
At2g06220 37.1 100.0 0.068 transposable element gene
At3g28740 30.3 100.0 0.031 CYP81D1
At5g19580 25.2 99.9 0.049 glyoxal oxidase-related
At3g42390 22.2 99.9 0.040 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P
At1g34330 22.1 99.9 0.071 -
At1g42700 18.6 99.9 0.117 F:molecular_function unknown;P:response to cold;C:nucleus;P
At5g12940 18.6 99.9 0.060 leucine-rich repeat family protein
At1g62520 16.9 99.9 0.138 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PFOB
At5g61550 16.3 99.9 0.071 protein kinase family protein
At1g62320 15.1 99.9 0.048 early-responsive to dehydration protein-related / ERD protein-related

Metabolites

Inst. Type Regulated metabolite Std.R. P.R. D.F. D.R. KaPPA-View KEGG Formula Mass Measured mass
GC-MS unknown 79.2 100.0 2/5 1 - - - - 103 131 143
GC-MS unknown 42.4 99.9 4/5 2 - - - - 131
GC-MS unknown 40.2 99.9 5/5 1 - - - - 144 143 89 116
GC-MS unknown 30.9 99.8 5/5 2 - - - - 255 135 165 270
GC-MS unknown 16.6 99.4 5/5 2 - - - - 147 129 103 217 361
GC-MS unknown 16.0 99.4 5/5 1 - - - - 210 88 85
GC-MS unknown 15.2 99.3 4/5 2 - - - - 190 147 332
GC-MS unknown 14.7 99.3 5/5 1 - - - - 147 113 128
GC-MS unknown 12.0 99.0 5/5 1 - - - - 142 186 147 205
LC-MS unknown 20.2 99.4 1/5 1.7 - - - 793.2723 794.2801
LC-MS unknown 13.4 99.1 1/5 1.6 - - - 315.0743 316.0821
LC-MS unknown 11.2 98.9 1/5 1.8 - - - 348.0849 349.0927
LC-MS unknown 8.3 98.4 1/5 1.2 - - - 209.0394 210.0472
LC-MS unknown 5.0 97.3 3/5 1.6 - - - 752.2393 753.2471
CE-MS unknown 28.3 99.7 5/5 1.5 - - - 230 229
CE-MS unknown 22.8 99.6 5/5 1.6 - - - 504 503
CE-MS unknown 18.8 99.5 5/5 1.5 - - - 283 284
CE-MS unknown 18.6 99.5 5/5 1.7 - - - 218 219
CE-MS unknown 11.4 99.1 5/5 1.8 - - - 88 89






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