RnR The prediction of regulatory relationships associated with At3g61950

QueryAt3g61950
Descriptionbasic helix-loop-helix (bHLH) family protein
RAFL IDpda11556
C.R.C
R.O.X.L.10/10 lines
P.O.X. 100.0

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Click here to extract genes up-regulated and also co-expressed.

Maroonover-expressed gene
Orangegene
Yellowmetabolite, lipid mode, GC-MS
Cyanmetabolite, polar mode, GC-MS
Bluemetabolite, LC-MS
Greenmetabolite, negative mode, CE-MS
Limegreenmetabolite, positive mode, CE-MS



Candidate elements regulated by At3g61950

Genes

Regulated gene Std.R. P.R. Co-X Gene name/alias
At3g61950 213.4 100.0 1.000 basic helix-loop-helix (bHLH) family protein
At1g60590 196.2 100.0 0.586 polygalacturonase, putative / pectinase, putative
At5g48485 170.7 100.0 0.575 DIR1 (DEFECTIVE IN INDUCED RESISTANCE 1)
At3g22120 166.6 100.0 0.594 CWLP (CELL WALL-PLASMA MEMBRANE LINKER PROTEIN)
At5g13140 114.6 100.0 0.723 -
At1g10640 99.5 100.0 0.673 polygalacturonase
At5g56320 53.4 100.0 0.150 ATEXPA14 (ARABIDOPSIS THALIANA EXPANSIN A14)
At2g13610 35.0 100.0 0.775 ABC transporter family protein
At4g15210 28.7 100.0 0.406 BAM5 (BETA-AMYLASE 5)
At3g14380 26.0 99.9 0.387 integral membrane family protein
At5g51850 24.4 99.9 0.689 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOPFB
At5g54250 24.1 99.9 0.608 ATCNGC4 (CYCLIC NUCLEOTIDE-GATED CATION CHANNEL 4)
At1g16705 24.0 99.9 0.558 p300/CBP acetyltransferase-related protein-related
At5g66815 22.1 99.9 0.113 F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P
At1g12130 19.8 99.9 0.234 flavin-containing monooxygenase family protein / FMO family protein
At1g52940 19.2 99.9 0.139 PAP5 (PURPLE ACID PHOSPHATASE 5)
At3g10720 19.2 99.9 0.336 pectinesterase, putative
At4g22470 19.1 99.9 0.150 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein
At2g22960 18.7 99.9 0.432 serine carboxypeptidase S10 family protein
At2g25540 18.5 99.9 0.319 CESA10 (CELLULOSE SYNTHASE 10)
At1g61800 17.3 99.9 0.265 GPT2
At1g50720 17.0 99.9 0.229 stigma-specific Stig1 family protein
At4g00870 16.9 99.9 0.517 basic helix-loop-helix (bHLH) family protein
At5g26020 16.9 99.9 0.340 transposable element gene
At5g63800 16.7 99.9 0.429 MUM2 (MUCILAGE-MODIFIED 2)
At1g20070 16.0 99.9 0.376 F:molecular_function unknown;P:biological_process unknown;C:chloroplast;P
At1g22240 16.0 99.9 0.601 APUM8 (Arabidopsis Pumilio 8)
At4g37220 15.7 99.9 0.125 stress-responsive protein, putative

Metabolites

Inst. Type Regulated metabolite Std.R. P.R. D.F. D.R. KaPPA-View KEGG Formula Mass Measured mass
GC-MS unknown 110.8 100.0 5/5 2 - - - -
GC-MS unknown 72.9 100.0 5/5 2 - - - - 267 223 193 91
GC-MS unknown 27.6 99.8 5/5 2 - - - -
GC-MS unknown 22.7 99.7 5/5 1 - - - -
GC-MS unknown 12.0 99.0 5/5 1 - - - - 87 129
GC-MS unknown 12.0 99.0 5/5 2 - - - - 147 281 327
LC-MS unknown 10.3 98.8 1/5 1.5 - - - 594.1224 595.1302
LC-MS unknown 6.4 97.9 4/5 1.3 - - - 212.0736 213.0814
LC-MS unknown 4.3 96.8 5/5 1.5 - - - 310.1227 311.1305






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