RnR The prediction of regulatory relationships associated with At3g59060

QueryAt3g59060
DescriptionPIL6 (PHYTOCHROME INTERACTING FACTOR 3-LIKE 6)
RAFL IDpda07294
C.R.F
R.O.X.L.10/10 lines
P.O.X. 100.0

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Click here to extract genes up-regulated and also co-expressed.

Maroonover-expressed gene
Orangegene
Yellowmetabolite, lipid mode, GC-MS
Cyanmetabolite, polar mode, GC-MS
Bluemetabolite, LC-MS
Greenmetabolite, negative mode, CE-MS
Limegreenmetabolite, positive mode, CE-MS



Candidate elements regulated by At3g59060

Genes

Regulated gene Std.R. P.R. Co-X Gene name/alias
At3g59060 190.7 100.0 1.000 PIL6 (PHYTOCHROME INTERACTING FACTOR 3-LIKE 6)
At2g43800 38.3 100.0 0.306 formin homology 2 domain-containing protein / FH2 domain-containing protein
At2g15090 24.7 99.9 0.576 KCS8 (3-KETOACYL-COA SYNTHASE 8)
At3g33080 24.5 99.9 0.038 transposable element gene
At2g06330 22.8 99.9 0.087 transposable element gene
At1g37160 22.4 99.9 0.122 transposable element gene
At3g12910 21.3 99.9 0.197 transcription factor
At1g69150 20.5 99.9 0.171 DC1 domain-containing protein
At2g33320 18.1 99.9 0.068 C2 domain-containing protein
At5g25890 17.8 99.9 0.215 IAA28 (INDOLE-3-ACETIC ACID INDUCIBLE 28)
At2g11120 17.4 99.9 0.106 transposable element gene
At1g26290 16.3 99.9 0.379 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMPBF
At3g09940 16.2 99.9 0.199 MDHAR (MONODEHYDROASCORBATE REDUCTASE)
At2g18560 16.0 99.9 0.334 UDP-glucoronosyl/UDP-glucosyl transferase family protein
At5g18160 15.2 99.9 0.169 F-box family protein

Metabolites

Inst. Type Regulated metabolite Std.R. P.R. D.F. D.R. KaPPA-View KEGG Formula Mass Measured mass
GC-MS unknown 36.3 99.8 5/5 2 - - - - 174 86 223 313
GC-MS N-Acetyl-D-glucosamine 27.9 99.8 5/5 2 KPC01449 C00140 C8H15NO6 221.0899372 147 205 319 129 117
GC-MS unknown 23.4 99.7 1/5 1 - - - - 85 174 154
GC-MS unknown 17.1 99.4 5/5 2 - - - - 130 174
GC-MS unknown 15.7 99.3 5/5 1 - - - - 341 325 147 429
GC-MS Allantoic acid 15.6 99.3 5/5 1 KPC00298 C00499 C4H8N4O4 176.0545548 100 147 331 188
GC-MS unknown 15.6 99.3 5/5 1 - - - - 147 103 217 204 319
GC-MS L-Arginine 12.9 99.1 5/5 2 KPC00670 C00062 C6H14N4O2 174.1116757 263 142
GC-MS unknown 12.8 99.1 5/5 2 - - - - 117 85 109
LC-MS unknown 189.3 99.9 1/5 1.0 - - - 711.2069 712.2147
LC-MS unknown 168.2 99.9 1/5 1.0 - - - 393.1329 394.1407
LC-MS unknown 118.9 99.8 1/5 1.1 - - - 145.0592 146.0670
LC-MS unknown 108.5 99.8 2/5 1.0 - - - 329.1154 330.1232
LC-MS unknown 68.2 99.8 1/5 1.0 - - - 148.0574 149.0652
LC-MS unknown 67.2 99.8 1/5 1.2 - - - 606.1820 607.1898
LC-MS unknown 34.5 99.6 1/5 1.5 - - - 138.0319 139.0397
LC-MS unknown 32.1 99.6 1/5 1.3 - - - 154.0293 155.0371
LC-MS unknown 19.1 99.3 1/5 1.6 - - - 508.0741 509.0819
LC-MS unknown 18.7 99.3 1/5 1.5 - - - 251.0812 252.0890
LC-MS unknown 17.1 99.3 1/5 1.0 - - - 418.1151 419.1229
LC-MS unknown 16.2 99.2 1/5 1.0 - - - 407.0849 408.0927
LC-MS unknown 16.0 99.2 5/5 1.3 - - - 208.0384 209.0462
LC-MS unknown 13.7 99.1 1/5 1.5 - - - 654.1543 655.1621
LC-MS unknown 13.7 99.1 3/5 1.8 - - - 738.2716 739.2794
LC-MS unknown 13.5 99.1 1/5 1.0 - - - 419.0805 420.0883
LC-MS unknown 12.3 99.0 1/5 1.6 - - - 622.1531 623.1609
CE-MS unknown 35.9 99.8 5/5 1.6 - - - 165 166
CE-MS unknown 17.8 99.5 5/5 1.5 - - - 96 95
CE-MS unknown 10.3 99.0 5/5 1.5 - - - 368 367
CE-MS unknown 8.5 98.7 1/5 1.1 - - - 307 308
CE-MS unknown 7.7 98.5 5/5 1.3 - - - 305 306






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