RnR The prediction of regulatory relationships associated with At3g54430

QueryAt3g54430
DescriptionSRS6 (SHI-RELATED SEQUENCE 6)
RAFL IDpda03507
C.R.C
R.O.X.L.10/10 lines
P.O.X. 100.0

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Maroonover-expressed gene
Orangegene
Yellowmetabolite, lipid mode, GC-MS
Cyanmetabolite, polar mode, GC-MS
Bluemetabolite, LC-MS
Greenmetabolite, negative mode, CE-MS
Limegreenmetabolite, positive mode, CE-MS



Candidate elements regulated by At3g54430

Genes

Regulated gene Std.R. P.R. Co-X Gene name/alias
At3g54430 143.1 100.0 1.000 SRS6 (SHI-RELATED SEQUENCE 6)
At4g17860 95.1 100.0 0.478 F:unknown;P:biological_process unknown;C:endomembrane system;PF
At4g22050 64.1 100.0 0.120 aspartyl protease family protein
At5g24770 55.4 100.0 0.493 VSP2 (VEGETATIVE STORAGE PROTEIN 2)
At5g43030 51.0 100.0 0.134 DC1 domain-containing protein
At2g42380 49.1 100.0 0.336 bZIP transcription factor family protein
At1g49500 45.4 100.0 0.439 F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P
At3g50740 45.1 100.0 0.433 UGT72E1 (UDP-glucosyl transferase 72E1)
At2g45650 43.9 100.0 0.328 AGL6 (AGAMOUS-LIKE 6)
At5g42840 41.3 100.0 0.498 DC1 domain-containing protein
At4g22212 40.8 100.0 0.329 -
At4g11930 37.5 100.0 0.365 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PM
At4g13235 37.3 100.0 0.382 EDA21 (embryo sac development arrest 21)
At5g48430 35.6 100.0 0.257 aspartic-type endopeptidase
At5g01740 34.7 100.0 0.381 -
At1g77330 34.4 100.0 0.289 1-aminocyclopropane-1-carboxylate oxidase, putative / ACC oxidase, putative
At3g23930 33.7 100.0 0.456 F:molecular_function unknown;P:N-terminal protein myristoylation;C:cellular_component unknown;MOFBPVA
At1g70880 33.6 100.0 0.219 Bet v I allergen family protein
At1g15990 33.3 100.0 0.240 ATCNGC7 (CYCLIC NUCLEOTIDE GATED CHANNEL 7)
At5g20820 33.3 100.0 0.403 auxin-responsive protein-related
At2g28960 33.2 100.0 0.379 leucine-rich repeat protein kinase, putative
At3g62280 33.2 100.0 0.390 carboxylesterase/ hydrolase, acting on ester bonds
At1g13110 32.2 100.0 0.477 CYP71B7
At3g62270 31.7 100.0 0.439 anion exchange family protein
At2g06140 29.1 100.0 0.214 transposable element gene
At1g70890 28.5 100.0 0.451 MLP43 (MLP-LIKE PROTEIN 43)
At2g27000 27.3 99.9 0.292 CYP705A8
At1g50090 26.7 99.9 0.129 aminotransferase class IV family protein
At1g74500 25.3 99.9 0.204 bHLH family protein
At1g78460 24.9 99.9 0.144 SOUL heme-binding family protein
At2g02680 24.6 99.9 0.389 DC1 domain-containing protein
At2g28760 23.8 99.9 0.506 NAD-dependent epimerase/dehydratase family protein
At2g02280 23.6 99.9 0.212 AtPP2-B4 (Phloem protein 2-B4)
At3g25930 23.4 99.9 0.370 universal stress protein (USP) family protein
At1g67330 23.3 99.9 0.353 F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;POB
At4g32950 23.0 99.9 0.497 protein phosphatase 2C, putative / PP2C, putative
At3g12090 22.3 99.9 0.434 TET6 (TETRASPANIN6)
At3g16460 22.3 99.9 0.442 jacalin lectin family protein
At5g39870 22.2 99.9 0.058 F:unknown;P:unknown;C:endomembrane system;POBMA
At5g47950 22.2 99.9 0.319 transferase family protein
At1g33540 21.7 99.9 0.415 scpl18 (serine carboxypeptidase-like 18)
At1g31270 21.6 99.9 0.215 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown
At5g41280 21.6 99.9 0.237 -
At2g22170 21.2 99.9 0.448 lipid-associated family protein
At5g23220 21.1 99.9 0.287 NIC3 (NICOTINAMIDASE 3)
At3g59120 20.9 99.9 0.442 DC1 domain-containing protein
At1g61760 20.7 99.9 0.099 harpin-induced protein-related / HIN1-related / harpin-responsive protein-related
At2g14690 20.2 99.9 0.196 endo-1,4-beta-xylanase/ hydrolase, hydrolyzing O-glycosyl compounds
At4g05200 19.6 99.9 0.384 protein kinase family protein
At3g43680 19.5 99.9 0.294 transposable element gene
At4g21420 19.3 99.9 0.118 transposable element gene
At1g22500 19.0 99.9 0.420 zinc finger (C3HC4-type RING finger) family protein
At1g47840 18.8 99.9 0.395 HXK3 (HEXOKINASE 3)
At3g63200 18.6 99.9 0.570 PLP9 (PATATIN-LIKE PROTEIN 9)
At2g23440 18.5 99.9 0.350 F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P
At5g26280 18.5 99.9 0.424 meprin and TRAF homology domain-containing protein / MATH domain-containing protein
At1g30990 18.4 99.9 0.264 major latex protein-related / MLP-related
At1g13100 18.3 99.9 0.540 CYP71B29
At5g24270 18.0 99.9 0.374 SOS3 (SALT OVERLY SENSITIVE 3)
At5g45670 17.8 99.9 0.569 GDSL-motif lipase/hydrolase family protein
At2g42060 17.7 99.9 0.366 CHP-rich zinc finger protein, putative
At2g28700 17.5 99.9 0.277 AGL46 (AGAMOUS-LIKE 46)
At2g29740 17.5 99.9 0.490 UGT71C2 (UDP-GLUCOSYL TRANSFERASE 71C2)
At3g12470 17.4 99.9 0.408 nucleic acid binding
At2g10490 17.0 99.9 0.292 transposable element gene
At2g28970 16.8 99.9 0.436 leucine-rich repeat protein kinase, putative
At5g63390 16.6 99.9 0.287 F:molecular_function unknown;P:biological_process unknown;C:unknown;P
At2g11190 16.4 99.9 0.310 transposable element gene
At3g43800 16.4 99.9 0.536 ATGSTU27 (GLUTATHIONE S-TRANSFERASE TAU 27)
At1g64405 16.3 99.9 0.322 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P
At1g70850 16.3 99.9 0.417 MLP34 (MLP-LIKE PROTEIN 34)
At3g15800 15.8 99.9 0.127 glycosyl hydrolase family 17 protein
At5g45950 15.6 99.9 0.496 GDSL-motif lipase/hydrolase family protein
At5g28030 15.5 99.9 0.351 cysteine synthase, putative / O-acetylserine (thiol)-lyase, putative / O-acetylserine sulfhydrylase, putative
At5g39630 15.2 99.9 0.344 vesicle transport v-SNARE family protein
At3g03270 14.9 99.9 0.452 universal stress protein (USP) family protein / early nodulin ENOD18 family protein
At3g22570 14.9 99.9 0.272 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein
At3g30846 14.9 99.9 0.143 transposable element gene
At2g01900 14.8 99.9 0.377 endonuclease/exonuclease/phosphatase family protein
At2g32740 14.8 99.9 0.327 exostosin family protein

Metabolites

Inst. Type Regulated metabolite Std.R. P.R. D.F. D.R. KaPPA-View KEGG Formula Mass Measured mass
GC-MS Melibiose 79.9 100.0 5/5 1 KPC00761 C05402 C12H22O11 342.1162115 147 361 103 129 169
GC-MS L-Proline 38.1 99.9 5/5 1 KPC00732 C00148 C5H9NO2 115.0633285 103 172 144
GC-MS Allantoin 29.7 99.8 5/5 1 KPC00299 C01551 C4H6N4O3 158.0439901 188 174 147 100
GC-MS unknown 27.7 99.8 5/5 2 - - - - 99 153
GC-MS unknown 19.1 99.5 5/5 2 - - - - 105 135 165
GC-MS unknown 18.3 99.5 5/5 1 - - - -
LC-MS unknown 91.9 99.8 1/5 1.6 - - - 851.3209 852.3287
LC-MS unknown 72.2 99.8 2/5 1.5 - - - 865.3028 866.3106
LC-MS unknown 69.2 99.8 2/5 1.3 - - - 571.1697 572.1775
LC-MS unknown 69.2 99.8 2/5 1.4 - - - 847.2715 848.2793
LC-MS unknown 66.6 99.8 1/5 1.2 - - - 1143.4272 1144.4350
LC-MS unknown 62.9 99.8 4/5 1.4 - - - 541.1933 542.2011
LC-MS unknown 55.4 99.7 2/5 1.1 - - - 618.2769 619.2847
LC-MS unknown 49.1 99.7 1/5 1.6 - - - 381.1054 382.1132
LC-MS unknown 43.8 99.7 2/5 1.3 - - - 212.0736 213.0814
LC-MS unknown 42.1 99.7 1/5 1.0 - - - 239.0462 240.0540
LC-MS unknown 31.8 99.6 4/5 1.6 - - - 280.0816 281.0894
LC-MS unknown 31.6 99.6 2/5 1.2 - - - 1141.4344 1142.4422
LC-MS unknown 30.7 99.6 3/5 1.5 - - - 636.1964 637.2042
LC-MS unknown 27.2 99.5 1/5 1.9 - - - 1003.3158 1004.3236
LC-MS unknown 27.0 99.5 3/5 1.5 - - - 799.2813 800.2891
LC-MS unknown 26.6 99.5 1/5 1.3 - - - 354.1203 355.1281
LC-MS unknown 24.8 99.5 2/5 1.8 - - - 532.1733 533.1811
LC-MS unknown 22.2 99.4 1/5 1.4 - - - 436.1560 437.1638
LC-MS unknown 21.1 99.4 1/5 1.2 - - - 671.2387 672.2465
LC-MS unknown 20.3 99.4 3/5 1.7 - - - 1066.4257 1067.4335
LC-MS unknown 20.0 99.4 1/5 1.3 - - - 625.2285 626.2363
LC-MS unknown 18.8 99.3 1/5 1.3 - - - 252.0777 253.0855
LC-MS unknown 18.2 99.3 2/5 1.1 - - - 894.3319 895.3397
LC-MS unknown 17.5 99.3 2/5 1.5 - - - 835.2929 836.3007
LC-MS unknown 17.3 99.3 4/5 1.8 - - - 279.0734 280.0812
LC-MS unknown 16.8 99.3 1/5 1.2 - - - 606.1820 607.1898
LC-MS unknown 15.9 99.2 3/5 2.0 - - - 627.2365 628.2443
LC-MS unknown 15.8 99.2 1/5 1.2 - - - 607.2255 608.2333
LC-MS unknown 13.6 99.1 1/5 1.2 - - - 372.1271 373.1349
LC-MS unknown 13.4 99.1 3/5 1.2 - - - 960.3216 961.3294
LC-MS unknown 12.1 99.0 3/5 1.8 - - - 639.2071 640.2149
CE-MS unknown 26.8 99.7 1/5 1.5 - - - 347 346
CE-MS unknown 22.2 99.6 1/5 1.2 - - - 347 348
CE-MS unknown 21.7 99.6 5/5 1.7 - - - 136 135
CE-MS unknown 20.6 99.6 2/5 1.9 - - - 426 427
CE-MS unknown 20.2 99.5 3/5 1.5 - - - 345 344
CE-MS unknown 19.3 99.5 5/5 1.5 - - - 301 300
CE-MS unknown 17.5 99.5 4/5 1.9 - - - 132 131
CE-MS unknown 16.3 99.4 5/5 1.4 - - - 129 128
CE-MS unknown 15.9 99.4 5/5 1.2 - - - 187 186
CE-MS unknown 14.2 99.3 5/5 1.4 - - - 307 306
CE-MS unknown 12.6 99.2 5/5 1.5 - - - 304 303
CE-MS unknown 12.5 99.2 3/5 1.3 - - - 331 330
CE-MS unknown 10.7 99.0 5/5 1.5 - - - 240 239
CE-MS unknown 10.7 99.0 4/5 1.8 - - - 175 176






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