RnR The prediction of regulatory relationships associated with At3g27810

QueryAt3g27810
DescriptionATMYB21 (ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 21)
RAFL IDpda11468
C.R.C
R.O.X.L.10/10 lines
P.O.X. 100.0

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Maroonover-expressed gene
Orangegene
Yellowmetabolite, lipid mode, GC-MS
Cyanmetabolite, polar mode, GC-MS
Bluemetabolite, LC-MS
Greenmetabolite, negative mode, CE-MS
Limegreenmetabolite, positive mode, CE-MS



Candidate elements regulated by At3g27810

Genes

Regulated gene Std.R. P.R. Co-X Gene name/alias
At3g27810 213.7 100.0 1.000 ATMYB21 (ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 21)
At1g52190 209.3 100.0 0.242 proton-dependent oligopeptide transport (POT) family protein
At5g05960 196.4 100.0 0.025 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein
At1g51440 191.6 100.0 0.515 lipase class 3 family protein
At5g42680 188.1 100.0 0.335 F:molecular_function unknown;P:biological_process unknown;C:unknown;P
At1g24020 180.7 100.0 0.378 MLP423 (MLP-LIKE PROTEIN 423)
At3g14560 174.8 100.0 0.634 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P
At3g45160 174.3 100.0 0.026 F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P
At4g30460 167.0 100.0 0.083 glycine-rich protein
At1g44800 165.9 100.0 0.112 nodulin MtN21 family protein
At4g22200 147.9 100.0 0.336 AKT2/3 (ARABIDOPSIS POTASSIUM TRANSPORT 2/3)
At4g34131 118.6 100.0 0.185 UGT73B3 (UDP-glucosyl transferase 73B3)
At5g40350 115.5 100.0 0.848 MYB24 (myb domain protein 24)
At1g23730 113.3 100.0 0.244 BCA3 (BETA CARBONIC ANHYDRASE 4)
At1g25450 109.4 100.0 0.166 KCS5 (3-KETOACYL-COA SYNTHASE 5)
At1g68570 108.9 100.0 0.405 proton-dependent oligopeptide transport (POT) family protein
At3g17180 102.6 100.0 0.165 scpl33 (serine carboxypeptidase-like 33)
At4g22160 101.5 100.0 0.286 F:molecular_function unknown;P:biological_process unknown;C:unknown;P
At3g10320 100.8 100.0 0.507 transferase, transferring glycosyl groups
At4g39480 97.9 100.0 0.737 CYP96A9 (CYTOCHROME P450 96 A9)
At4g10310 97.1 100.0 0.381 HKT1 (HIGH-AFFINITY K+ TRANSPORTER 1)
At3g51895 96.1 100.0 0.356 SULTR3
At3g12750 93.9 100.0 0.234 ZIP1 (ZINC TRANSPORTER 1 PRECURSOR)
At5g28650 90.8 100.0 0.122 WRKY74
At2g38540 90.5 100.0 0.217 LP1
At1g24000 87.3 100.0 0.031 Bet v I allergen family protein
At4g31330 84.8 100.0 0.363 F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;BPO
At5g07080 80.1 100.0 0.063 transferase family protein
At4g24130 78.2 100.0 0.323 F:unknown;P:biological_process unknown;C:nucleus;P
At4g08150 77.2 100.0 0.157 KNAT1 (KNOTTED-LIKE FROM ARABIDOPSIS THALIANA)
At3g22420 77.1 100.0 0.394 WNK2 (WITH NO K 2)
At3g08040 73.6 100.0 0.176 FRD3 (FERRIC REDUCTASE DEFECTIVE 3)
At5g08370 71.3 100.0 0.129 AtAGAL2 (Arabidopsis thaliana ALPHA-GALACTOSIDASE 2)
At2g35070 70.5 100.0 0.126 F:molecular_function unknown;P:pollen tube development, pollen development;C:mitochondrion;P
At3g63470 69.1 100.0 0.211 scpl40 (serine carboxypeptidase-like 40)
At2g36830 64.8 100.0 0.166 GAMMA-TIP (GAMMA TONOPLAST INTRINSIC PROTEIN)
At2g27240 63.4 100.0 0.199 F:unknown;P:biological_process unknown;C:unknown;PBOF
At2g17470 61.8 100.0 0.471 F:unknown;P:biological_process unknown;C:unknown;BPOF
At4g14010 61.7 100.0 0.090 RALFL32 (ralf-like 32)
At4g30450 61.7 100.0 0.085 glycine-rich protein
At3g13130 59.0 100.0 0.140 F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;OMPFB
At5g24410 58.9 100.0 0.024 glucosamine/galactosamine-6-phosphate isomerase-related
At2g36120 56.3 100.0 0.036 DOT1 (DEFECTIVELY ORGANIZED TRIBUTARIES 1)
At1g80760 55.7 100.0 0.148 NIP6
At1g56430 55.2 100.0 0.030 NAS4 (NICOTIANAMINE SYNTHASE 4)
At5g05280 54.1 100.0 0.317 zinc finger (C3HC4-type RING finger) family protein
At2g38530 53.4 100.0 0.107 LTP2 (LIPID TRANSFER PROTEIN 2)
At2g10610 53.2 100.0 0.052 transposable element gene
At2g22980 51.9 100.0 0.105 serine-type carboxypeptidase
At3g51710 51.7 100.0 0.166 curculin-like (mannose-binding) lectin family protein / PAN domain-containing protein
At3g23460 49.4 100.0 0.288 cyclopropane fatty acid synthase-related
At1g01070 49.2 100.0 0.167 nodulin MtN21 family protein
At1g53885 49.0 100.0 0.128 senescence-associated protein-related
At2g30890 49.0 100.0 0.174 membrane protein, putative
At3g57510 48.9 100.0 0.508 ADPG1
At3g28345 46.6 100.0 0.044 ABC transporter family protein
At5g43870 46.5 100.0 0.225 phosphoinositide binding
At5g46730 46.0 100.0 0.263 glycine-rich protein
At1g35260 44.3 100.0 0.096 MLP165 (MLP-LIKE PROTEIN 165)
At2g18560 44.0 100.0 0.130 UDP-glucoronosyl/UDP-glucosyl transferase family protein
At3g56620 43.6 100.0 0.208 integral membrane family protein / nodulin MtN21-related
At1g24010 42.5 100.0 0.084 -
At4g09890 42.5 100.0 0.194 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P
At4g33450 42.5 100.0 0.107 MYB69 (MYB DOMAIN PROTEIN 69)
At4g30110 41.3 100.0 0.101 HMA2
At1g10970 41.0 100.0 0.201 ZIP4 (ZINC TRANSPORTER 4 PRECURSOR)
At2g13760 40.7 100.0 0.121 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POFM
At1g66140 39.6 100.0 0.030 ZFP4 (ZINC FINGER PROTEIN 4)
At1g20440 39.1 100.0 0.164 COR47 (COLD-REGULATED 47)
At3g28420 38.7 100.0 0.190 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P
At5g50790 38.6 100.0 0.397 nodulin MtN3 family protein
At4g22790 38.0 100.0 0.282 MATE efflux family protein
At4g25760 36.8 100.0 0.145 AtGDU2 (Arabidopsis thaliana GLUTAMINE DUMPER 2)
At4g25434 36.7 100.0 0.046 ATNUDT10 (Arabidopsis thaliana Nudix hydrolase homolog 10)
At5g50010 36.0 100.0 0.327 transcription factor/ transcription regulator
At4g21620 35.6 100.0 0.209 glycine-rich protein
At4g34600 34.8 100.0 0.026 F:molecular_function unknown;P:unknown;C:endomembrane system;P
At1g25530 33.9 100.0 0.080 lysine and histidine specific transporter, putative
At2g38170 33.9 100.0 0.164 CAX1 (cation exchanger 1)
At4g36380 33.4 100.0 0.176 ROT3 (ROTUNDIFOLIA 3)
At5g27810 33.1 100.0 0.091 sequence-specific DNA binding / transcription factor
At1g48750 32.6 100.0 0.363 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein
At5g50160 32.5 100.0 0.100 FRO8 (FERRIC REDUCTION OXIDASE 8)
At1g78020 32.4 100.0 0.177 senescence-associated protein-related
At1g19640 32.2 100.0 0.231 JMT (JASMONIC ACID CARBOXYL METHYLTRANSFERASE)
At2g40470 32.0 100.0 0.065 LBD15 (LOB DOMAIN-CONTAINING PROTEIN 15)
At5g62680 31.9 100.0 0.219 proton-dependent oligopeptide transport (POT) family protein
At4g33420 31.2 100.0 0.054 peroxidase, putative
At5g51720 31.1 100.0 0.104 F:molecular_function unknown;P:biological_process unknown;C:chloroplast stroma, chloroplast;MPO
At4g37300 31.0 100.0 0.115 MEE59 (maternal effect embryo arrest 59)
At1g07450 29.8 100.0 0.403 tropinone reductase, putative / tropine dehydrogenase, putative
At1g78970 29.6 100.0 0.370 LUP1 (LUPEOL SYNTHASE 1)
At1g77760 29.2 100.0 0.054 NIA1 (NITRATE REDUCTASE 1)
At1g18880 29.1 100.0 0.051 proton-dependent oligopeptide transport (POT) family protein
At1g67830 29.0 100.0 0.244 ATFXG1 (alpha-fucosidase 1)
At4g31910 29.0 100.0 0.063 transferase family protein
At3g62550 28.7 100.0 0.065 universal stress protein (USP) family protein
At4g34610 28.6 100.0 0.122 BLH6 (BELL1-LIKE HOMEODOMAIN 6)
At1g21890 28.2 100.0 0.032 nodulin MtN21 family protein
At3g14530 28.1 100.0 0.071 geranylgeranyl pyrophosphate synthase, putative / GGPP synthetase, putative / farnesyltranstransferase, putative
At2g14900 27.2 99.9 0.194 gibberellin-regulated family protein
At1g57590 26.5 99.9 0.102 carboxylesterase
At3g54340 25.9 99.9 0.549 AP3 (APETALA 3)
At3g01700 25.4 99.9 0.171 AGP11
At1g15260 25.3 99.9 0.248 F:molecular_function unknown;P:biological_process unknown;C:unknown;P
At4g25790 24.4 99.9 0.027 allergen V5/Tpx-1-related family protein
At1g49470 24.3 99.9 0.116 F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PM
At1g23270 24.2 99.9 0.021 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMBPF
At1g51300 23.9 99.9 0.096 acyl-protein thioesterase-related
At1g60960 23.6 99.9 0.115 IRT3
At3g02310 23.6 99.9 0.541 SEP2 (SEPALLATA 2)
At1g51140 23.5 99.9 0.179 basic helix-loop-helix (bHLH) family protein
At3g28050 23.5 99.9 0.392 nodulin MtN21 family protein
At4g03010 23.3 99.9 0.217 leucine-rich repeat family protein
At4g03880 22.6 99.9 0.100 transposable element gene
At4g35060 22.6 99.9 0.202 heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related
At1g67750 22.5 99.9 0.184 pectate lyase family protein
At3g57800 22.5 99.9 0.323 basic helix-loop-helix (bHLH) family protein
At5g25130 22.5 99.9 0.066 CYP71B12
At3g53720 22.3 99.9 0.171 ATCHX20 (CATION/H+ EXCHANGER 20)
At5g36840 22.3 99.9 0.065 transposable element gene
At5g14940 22.1 99.9 0.203 proton-dependent oligopeptide transport (POT) family protein
At5g61520 22.0 99.9 0.114 hexose transporter, putative
At3g21850 21.9 99.9 0.057 ASK9 (ARABIDOPSIS SKP1-LIKE 9)
At3g13730 21.8 99.9 0.104 CYP90D1
At5g62400 21.8 99.9 0.154 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P
At3g28130 21.4 99.9 0.150 nodulin MtN21 family protein
At4g17340 21.4 99.9 0.029 TIP2
At5g57840 21.1 99.9 0.195 transferase family protein
At1g65620 20.7 99.9 0.298 AS2 (ASYMMETRIC LEAVES 2)
At5g58310 20.5 99.9 0.088 MES18 (METHYL ESTERASE 18)
At2g32490 20.2 99.9 0.146 -
At5g38930 20.2 99.9 0.019 germin-like protein, putative
At1g26920 20.1 99.9 0.166 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PFO
At5g11070 20.1 99.9 0.124 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P
At1g23760 20.0 99.9 0.062 JP630
At5g39280 20.0 99.9 0.009 ATEXPA23 (ARABIDOPSIS THALIANA EXPANSIN A23)
At2g31110 19.7 99.9 0.209 F:unknown;P:biological_process unknown;C:unknown;P
At3g43960 19.6 99.9 0.217 cysteine proteinase, putative
At4g37970 19.4 99.9 0.076 CAD6 (CINNAMYL ALCOHOL DEHYDROGENASE 6)
At2g40900 18.9 99.9 0.083 nodulin MtN21 family protein
At4g14690 18.9 99.9 0.106 ELIP2 (EARLY LIGHT-INDUCIBLE PROTEIN 2)
At5g50500 18.9 99.9 0.096 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P
At2g47050 18.8 99.9 0.222 invertase/pectin methylesterase inhibitor family protein
At5g60890 18.8 99.9 0.030 MYB34 (MYB DOMAIN PROTEIN 34)
At1g48800 18.7 99.9 0.069 terpene synthase/cyclase family protein
At1g60720 18.7 99.9 0.128 -
At2g48030 18.5 99.9 0.209 endonuclease/exonuclease/phosphatase family protein
At3g60490 18.5 99.9 0.106 AP2 domain-containing transcription factor TINY, putative
At5g24270 18.1 99.9 0.314 SOS3 (SALT OVERLY SENSITIVE 3)
At4g01430 18.0 99.9 0.333 nodulin MtN21 family protein
At3g19940 17.9 99.9 0.098 sugar transporter, putative
At1g68170 17.8 99.9 0.072 nodulin MtN21 family protein
At5g01190 17.8 99.9 0.109 LAC10 (laccase 10)
At3g15570 17.7 99.9 0.041 phototropic-responsive NPH3 family protein
At4g25590 17.7 99.9 0.149 ADF7 (actin depolymerizing factor 7)
At1g52400 17.5 99.9 0.273 BGLU18 (BETA GLUCOSIDASE 18)
At2g41480 17.4 99.9 0.039 electron carrier/ heme binding / peroxidase
At1g72180 17.1 99.9 0.190 leucine-rich repeat transmembrane protein kinase, putative
At3g06160 17.0 99.9 0.268 transcriptional factor B3 family protein
At5g44260 16.9 99.9 0.081 zinc finger (CCCH-type) family protein
At3g18960 16.7 99.9 0.171 transcriptional factor B3 family protein
At2g25625 16.6 99.9 0.141 F:molecular_function unknown;P:biological_process unknown;C:chloroplast;P
At3g24210 16.6 99.9 0.035 ankyrin repeat family protein
At5g58750 16.6 99.9 0.131 wound-responsive protein-related
At5g64900 16.6 99.9 0.148 PROPEP1
At2g03530 16.3 99.9 0.126 UPS2 (UREIDE PERMEASE 2)
At3g08490 16.1 99.9 0.118 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P
At3g42970 16.1 99.9 0.079 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P
At2g34800 15.9 99.9 0.098 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P
At2g30830 15.8 99.9 0.103 2-oxoglutarate-dependent dioxygenase, putative
At5g42180 15.7 99.9 0.018 peroxidase 64 (PER64) (P64) (PRXR4)
At1g08430 15.4 99.9 0.016 ALMT1 (ALUMINUM-ACTIVATED MALATE TRANSPORTER 1)
At2g39920 15.4 99.9 0.087 acid phosphatase class B family protein
At3g55090 15.3 99.9 0.088 ATPase, coupled to transmembrane movement of substances
At4g34770 15.3 99.9 0.080 auxin-responsive family protein
At1g19630 15.2 99.9 0.054 CYP722A1
At5g47550 15.2 99.9 0.211 cysteine protease inhibitor, putative / cystatin, putative
At1g12260 15.0 99.9 0.131 ANAC007 (ARABIDOPSIS NAC 007)
At3g28100 15.0 99.9 0.127 nodulin MtN21 family protein
At5g62140 15.0 99.9 0.100 F:molecular_function unknown;P:biological_process unknown;C:chloroplast;PBO
At1g76800 14.8 99.9 0.058 nodulin, putative
At5g61470 14.6 99.9 0.036 zinc finger (C2H2 type) family protein

Metabolites

Inst. Type Regulated metabolite Std.R. P.R. D.F. D.R. KaPPA-View KEGG Formula Mass Measured mass
GC-MS D-Fructose 56.0 99.9 5/5 1 KPC00529 C10906 C6H12O6 180.0633881 103 217 147 307
GC-MS D-Fructose 52.8 99.9 5/5 1 KPC00529 C10906 C6H12O6 180.0633881 103 217 147 307
GC-MS unknown 51.9 99.9 5/5 1 - - - - 147 117 292
GC-MS unknown 36.8 99.9 5/5 2 - - - - 103 147 217 117 205
GC-MS unknown 24.0 99.7 5/5 2 - - - - 92
GC-MS unknown 16.5 99.4 5/5 2 - - - - 147 103 217 204 361
GC-MS unknown 16.2 99.4 4/5 2 - - - - 91 473 115 229
GC-MS unknown 14.1 99.2 5/5 1 - - - - 89 147 133 302
GC-MS unknown 12.5 99.0 2/5 1 - - - - 147 204 217 103
GC-MS unknown 12.3 99.0 5/5 2 - - - - 103 101 147 204 118 361
GC-MS unknown 12.0 99.0 5/5 2 - - - - 147 203
LC-MS unknown 61.3 99.8 1/5 1.0 - - - 362.0691 363.0769
LC-MS unknown 46.4 99.7 1/5 1.0 - - - 206.0592 207.0670
LC-MS unknown 32.9 99.6 1/5 1.0 - - - 702.1653 703.1731
LC-MS unknown 27.8 99.5 4/5 1.3 - - - 428.1548 429.1626
LC-MS unknown 26.9 99.5 1/5 1.1 - - - 383.1592 384.1670
LC-MS unknown 15.2 99.2 4/5 1.4 - - - 468.1438 469.1516
LC-MS unknown 14.6 99.1 5/5 1.3 - - - 181.1875 182.1953
LC-MS unknown 14.3 99.1 1/5 1.5 - - - 428.0759 429.0837
LC-MS unknown 13.5 99.1 1/5 1.7 - - - 304.0661 305.0739
CE-MS unknown 101.5 100.0 5/5 1.0 - - - 384 383
CE-MS unknown 41.6 99.9 5/5 1.9 - - - 384 385
CE-MS unknown 25.2 99.7 5/5 1.2 - - - 197 196
CE-MS unknown 23.3 99.6 1/5 2.0 - - - 84 85
CE-MS "D-Galacturonic acid, putative" 17.3 99.4 5/5 1.8 KPC00453 C00333 C6H10O7 194.0426527 193
CE-MS unknown 16.9 99.4 5/5 1.1 - - - 197 196
CE-MS unknown 13.0 99.2 1/5 1.5 - - - 491 490
CE-MS unknown 11.4 99.1 1/5 2.0 - - - 492 491
CE-MS unknown 10.5 99.0 1/5 2.0 - - - 345 344






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