RnR The prediction of regulatory relationships associated with At3g01530

QueryAt3g01530
DescriptionAtMYB57 (myb domain protein 57)
RAFL IDpda11120
C.R.S
R.O.X.L.10/10 lines
P.O.X. 100.0

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Click here to extract genes up-regulated and also co-expressed.

Maroonover-expressed gene
Orangegene
Yellowmetabolite, lipid mode, GC-MS
Cyanmetabolite, polar mode, GC-MS
Bluemetabolite, LC-MS
Greenmetabolite, negative mode, CE-MS
Limegreenmetabolite, positive mode, CE-MS



Candidate elements regulated by At3g01530

Genes

Regulated gene Std.R. P.R. Co-X Gene name/alias
At3g01530 213.7 100.0 1.000 AtMYB57 (myb domain protein 57)
At3g22420 80.9 100.0 0.336 WNK2 (WITH NO K 2)
At2g38530 70.6 100.0 0.089 LTP2 (LIPID TRANSFER PROTEIN 2)
At1g79760 63.0 100.0 0.016 DTA4 (DOWNSTREAM TARGET OF AGL15-4)
At3g16920 58.4 100.0 0.038 chitinase
At1g66140 47.2 100.0 0.039 ZFP4 (ZINC FINGER PROTEIN 4)
At3g27200 44.5 100.0 0.118 plastocyanin-like domain-containing protein
At1g59535 44.0 100.0 0.045 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P
At5g40020 43.5 100.0 0.056 pathogenesis-related thaumatin family protein
At1g20850 43.1 100.0 0.084 XCP2 (xylem cysteine peptidase 2)
At3g21550 40.8 100.0 0.336 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P
At3g13130 35.3 100.0 0.159 F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;OMPFB
At4g18780 33.9 100.0 0.050 IRX1 (IRREGULAR XYLEM 1)
At5g08370 33.9 100.0 0.113 AtAGAL2 (Arabidopsis thaliana ALPHA-GALACTOSIDASE 2)
At5g14940 33.9 100.0 0.127 proton-dependent oligopeptide transport (POT) family protein
At4g34610 33.2 100.0 0.146 BLH6 (BELL1-LIKE HOMEODOMAIN 6)
At2g37870 32.4 100.0 0.037 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein
At5g51890 32.2 100.0 0.071 peroxidase
At5g05690 31.8 100.0 0.108 CPD (CONSTITUTIVE PHOTOMORPHOGENIC DWARF)
At2g38080 30.2 100.0 0.063 IRX12 (IRREGULAR XYLEM 12)
At1g53885 29.9 100.0 0.062 senescence-associated protein-related
At1g45190 29.3 100.0 0.131 F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P
At1g70500 29.1 100.0 0.050 polygalacturonase, putative / pectinase, putative
At2g38540 25.4 99.9 0.163 LP1
At3g45160 25.4 99.9 0.036 F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P
At2g35870 25.2 99.9 0.146 -
At1g80760 23.4 99.9 0.151 NIP6
At5g60020 22.4 99.9 0.069 LAC17 (laccase 17)
At3g49170 22.3 99.9 0.070 EMB2261 (embryo defective 2261)
At5g42180 21.3 99.9 0.026 peroxidase 64 (PER64) (P64) (PRXR4)
At5g17420 20.9 99.9 0.052 IRX3 (IRREGULAR XYLEM 3)
At5g38950 20.9 99.9 0.078 germin-like protein-related
At1g24030 20.8 99.9 0.054 protein kinase family protein
At5g19890 20.7 99.9 0.025 peroxidase, putative
At2g25820 20.4 99.9 0.065 transcription factor
At4g35350 20.4 99.9 0.051 XCP1 (XYLEM CYSTEINE PEPTIDASE 1)
At4g34600 20.2 99.9 0.044 F:molecular_function unknown;P:unknown;C:endomembrane system;P
At2g30890 20.0 99.9 0.118 membrane protein, putative
At5g45880 19.9 99.9 0.141 pollen Ole e 1 allergen and extensin family protein
At3g03770 19.8 99.9 0.135 leucine-rich repeat transmembrane protein kinase, putative
At2g28440 19.7 99.9 0.053 proline-rich family protein
At5g44470 19.5 99.9 0.062 -
At1g79620 19.3 99.9 0.076 leucine-rich repeat transmembrane protein kinase, putative
At1g05310 19.1 99.9 0.090 pectinesterase family protein
At5g24270 19.1 99.9 0.097 SOS3 (SALT OVERLY SENSITIVE 3)
At4g09890 18.3 99.9 0.185 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P
At5g18460 18.2 99.9 0.157 F:unknown;P:biological_process unknown;C:endomembrane system;PFB
At1g16760 18.1 99.9 0.074 protein kinase family protein
At1g24600 18.1 99.9 0.146 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P
At5g51720 18.1 99.9 0.089 F:molecular_function unknown;P:biological_process unknown;C:chloroplast stroma, chloroplast;MPO
At3g62020 18.0 99.9 0.080 GLP10 (GERMIN-LIKE PROTEIN 10)
At5g34883 17.8 99.9 0.173 F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P
At1g23350 17.6 99.9 0.091 invertase/pectin methylesterase inhibitor family protein
At1g24010 17.6 99.9 0.077 -
At1g20440 17.4 99.9 0.162 COR47 (COLD-REGULATED 47)
At1g51900 17.4 99.9 0.098 F:molecular_function unknown;P:biological_process unknown;C:mitochondrion;OMBFPVA
At2g41480 17.0 99.9 0.039 electron carrier/ heme binding / peroxidase
At2g38170 16.7 99.9 0.134 CAX1 (cation exchanger 1)
At1g01070 16.5 99.9 0.118 nodulin MtN21 family protein
At5g24410 16.5 99.9 0.027 glucosamine/galactosamine-6-phosphate isomerase-related
At4g04270 16.4 99.9 0.034 transposable element gene
At4g10440 16.4 99.9 0.058 dehydration-responsive family protein
At4g22065 16.4 99.9 0.066 transposable element gene
At5g62120 16.4 99.9 0.040 ARR23 (ARABIDOPSIS RESPONSE REGULATOR 23)
At2g05820 16.2 99.9 0.041 transposable element gene
At5g54690 16.2 99.9 0.058 GAUT12 (GALACTURONOSYLTRANSFERASE 12)
At3g45570 16.1 99.9 0.058 zinc finger (C3HC4-type RING finger) family protein
At2g28470 15.9 99.9 0.253 BGAL8 (beta-galactosidase 8)
At2g40900 15.9 99.9 0.081 nodulin MtN21 family protein
At1g23760 15.8 99.9 0.055 JP630
At2g18560 15.8 99.9 0.154 UDP-glucoronosyl/UDP-glucosyl transferase family protein
At1g20120 15.7 99.9 0.188 family II extracellular lipase, putative
At1g71960 15.6 99.9 0.191 ABC transporter family protein
At4g22870 15.3 99.9 0.034 leucoanthocyanidin dioxygenase, putative / anthocyanidin synthase, putative
At5g07420 15.3 99.9 0.062 pectinesterase family protein
At2g24140 15.2 99.9 0.079 F:molecular_function unknown;P:biological_process unknown;C:unknown;MOPFBAV
At5g35190 15.1 99.9 0.021 proline-rich extensin-like family protein
At3g42320 15.0 99.9 0.056 transposable element gene
At4g18540 14.7 99.9 0.235 F:unknown;P:biological_process unknown;C:unknown;FPBM

Metabolites

Inst. Type Regulated metabolite Std.R. P.R. D.F. D.R. KaPPA-View KEGG Formula Mass Measured mass
GC-MS unknown 42.8 99.9 5/5 2 - - - - 147 103 217 204 361
GC-MS unknown 31.9 99.8 5/5 2 - - - - 147 203
GC-MS unknown 13.8 99.2 5/5 2 - - - - 146 130
GC-MS unknown 13.0 99.1 5/5 1 - - - - 105 83
GC-MS unknown 12.8 99.1 5/5 1 - - - - 85 99 113
GC-MS unknown 12.8 99.1 4/5 2 - - - - 100 117 147 183 205
GC-MS unknown 12.1 99.0 4/5 2 - - - - 91 473 115 229
GC-MS unknown 12.0 99.0 5/5 1 - - - - 147 117 292
GC-MS unknown 12.0 99.0 5/5 2 - - - - 92
LC-MS unknown 21.3 99.4 5/5 1.3 - - - 181.1875 182.1953
LC-MS unknown 3.5 96.0 4/5 1.0 - - - 185.0163 186.0241
LC-MS unknown 3.3 95.7 4/5 1.3 - - - 406.0301 407.0379
LC-MS unknown 3.2 95.6 5/5 1.5 - - - 1064.3282 1065.3360
CE-MS unknown 24.2 99.7 5/5 1.5 - - - 96 95
CE-MS unknown 15.7 99.4 5/5 1.3 - - - 156 155
CE-MS unknown 14.5 99.3 5/5 1.1 - - - 197 196
CE-MS unknown 12.4 99.2 1/5 1.8 - - - 147 146
CE-MS unknown 11.8 99.1 2/5 1.7 - - - 329 328
CE-MS unknown 11.0 99.0 5/5 1.2 - - - 197 196






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