RnR The prediction of regulatory relationships associated with At2g47460

QueryAt2g47460
DescriptionMYB12 (MYB DOMAIN PROTEIN 12)
RAFL IDpda06898
C.R.C
R.O.X.L.19/19 lines
P.O.X. 100.0

Jump to MassBase to obtain the original metabolomics dataset of this over-expression experiment.

Click here to show genes regulating the gene of interest.

Click here to extract genes up-regulated and also co-expressed.

Maroonover-expressed gene
Orangegene
Yellowmetabolite, lipid mode, GC-MS
Cyanmetabolite, polar mode, GC-MS
Bluemetabolite, LC-MS
Greenmetabolite, negative mode, CE-MS
Limegreenmetabolite, positive mode, CE-MS



Candidate elements regulated by At2g47460

Genes

Regulated gene Std.R. P.R. Co-X Gene name/alias
At5g47980 95.6 100.0 0.395 transferase family protein
At5g48880 62.6 100.0 0.365 PKT2 (PEROXISOMAL 3-KETO-ACYL-COA THIOLASE 2)
At4g15480 48.5 100.0 0.609 UGT84A1
At3g26450 43.4 100.0 0.253 major latex protein-related / MLP-related
At3g55120 41.2 100.0 0.580 TT5 (TRANSPARENT TESTA 5)
At5g08640 39.4 100.0 0.654 FLS (FLAVONOL SYNTHASE)
At3g51240 39.1 100.0 0.649 F3H (FLAVANONE 3-HYDROXYLASE)
At1g12740 38.4 100.0 0.334 CYP87A2
At1g65060 36.9 100.0 0.465 4CL3
At5g05270 36.1 100.0 0.535 chalcone-flavanone isomerase family protein
At5g02550 33.2 100.0 0.411 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P
At5g17220 31.3 100.0 0.124 ATGSTF12 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE PHI 12)
At5g13930 28.5 100.0 0.593 TT4 (TRANSPARENT TESTA 4)
At2g47460 28.3 100.0 1.000 MYB12 (MYB DOMAIN PROTEIN 12)
At1g06540 25.7 99.9 0.057 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P
At2g22920 24.9 99.9 0.459 serine carboxypeptidase S10 family protein
At1g06620 24.8 99.9 0.275 2-oxoglutarate-dependent dioxygenase, putative
At1g30530 24.8 99.9 0.187 UGT78D1 (UDP-GLUCOSYL TRANSFERASE 78D1)
At2g22590 21.5 99.9 0.491 transferase, transferring glycosyl groups
At1g33540 20.8 99.9 0.428 scpl18 (serine carboxypeptidase-like 18)
At1g06550 20.7 99.9 0.520 enoyl-CoA hydratase/isomerase family protein
At2g17500 20.6 99.9 0.431 auxin efflux carrier family protein
At5g17040 20.1 99.9 0.417 UDP-glucoronosyl/UDP-glucosyl transferase family protein
At3g22570 18.2 99.9 0.465 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein
At4g23690 17.9 99.9 0.564 disease resistance-responsive family protein / dirigent family protein
At5g24270 17.7 99.9 0.470 SOS3 (SALT OVERLY SENSITIVE 3)
At2g27000 17.4 99.9 0.649 CYP705A8
At1g13420 16.7 99.9 0.421 ST4B (SULFOTRANSFERASE 4B)
At3g21520 16.0 99.9 0.172 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P
At1g36940 15.8 99.9 0.273 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P
At2g38750 15.5 99.9 0.391 ANNAT4 (ANNEXIN ARABIDOPSIS 4)
At3g09270 15.2 99.9 0.555 ATGSTU8 (GLUTATHIONE S-TRANSFERASE TAU 8)
At5g43580 14.8 99.9 0.395 serine-type endopeptidase inhibitor

Metabolites

Inst. Type Regulated metabolite Std.R. P.R. D.F. D.R. KaPPA-View KEGG Formula Mass Measured mass
GC-MS unknown 149.3 100.0 5/5 2 - - - - 147 103 129 361 169
GC-MS Glucose 1-phosphate 127.6 100.0 5/5 1 KPC00337 C00663 C6H13O9P 260.02972 217 147
GC-MS unknown 26.2 99.7 5/5 2 - - - - 103 101 147 204 118 361
GC-MS unknown 21.0 99.6 5/5 1 - - - - 147 133 290 205 319
GC-MS unknown 20.6 99.6 5/5 2 - - - - 100 147
GC-MS unknown 12.5 99.0 5/5 1 - - - - 89 117 147
LC-MS Quercetin [fragment] 201.0 100.0 5/5 1.0 KPC00937 C00389 C15H10O7 302.0426527 303.0593
LC-MS Isorhamnetin [fragment] 201.0 100.0 5/5 1.0 KPC01451 C10084 C16H12O7 316.0583027 317.0798
LC-MS unknown 201.0 100.0 5/5 3.0 - - - 915.2706 916.2784
LC-MS Isorhamnetin-hexose [2M+Na] 201.0 100.0 5/5 3.0 C22H22O12 478.1111262 979.2611
LC-MS Quercetin-hexose-6-deoxyhexose [2M+H] 201.0 100.0 5/5 1.0 C27H30O16 610.1534 1221.3794
LC-MS unknown 200.9 100.0 5/5 1.0 - - - 300.0997 301.1075
LC-MS Isorhamnetin [fragment] 200.9 100.0 5/5 1.0 KPC01451 C10084 C16H12O7 316.0583027 317.0723
LC-MS Isorhamnetin-hexose 200.9 100.0 5/5 1.0 C22H22O12 478.1111262 479.1301
LC-MS unknown 200.9 100.0 4/5 3.0 - - - 622.1817 623.1895
LC-MS unknown 200.9 100.0 4/5 1.7 - - - 913.2530 914.2608
LC-MS Kaempferol-di-hexose [2M+Na] 200.9 100.0 4/5 1.0 C27H30O16 610.1533849 1243.3657
LC-MS Quercetin-hexose-6-deoxyhexose 200.8 100.0 5/5 2.0 C27H30O16 610.1534 611.1935
LC-MS Kaempferol-6-deoxyhexose [2M+Na] 200.8 100.0 4/5 1.0 C21H20O10 432.1056469 887.2468
LC-MS Quercetin-hexose 200.7 100.0 5/5 1.0 C21H20O12 464.0954761 465.1183
LC-MS Kaempferol [fragment] 200.6 100.0 5/5 1.0 KPC00643 C05903 C15H10O6 286.0477381 287.0556
LC-MS Kaempferol-6-deoxyhexose 200.6 100.0 5/5 2.0 C21H20O10 432.1056469 433.1302
LC-MS Kaempferol-di-rhamnose [2M+H] 200.6 100.0 5/5 1.0 C27H30O14 578.1635557 1157.3960
LC-MS Isorhamnetin-hexose-6-deoxyhexose [2M+Na] 200.5 100.0 5/5 1.0 C28H32O16 624.169035 1271.3924
LC-MS Kaempferol-6-deoxyhexose [M+Na] 200.4 100.0 5/5 1.7 C21H20O10 432.1056469 455.1129
LC-MS Quercetin-hexose-6-deoxyhexose [M+Na] 200.4 100.0 5/5 1.0 C27H30O16 610.1534 633.1729
LC-MS Quercetin-6-deoxyhexose [fragment] 200.1 100.0 5/5 1.0 C21H20O11 448.1005615 449.1277
LC-MS Quercetin-hexose-di-6-deoxyhexose [M+Na] 200.1 100.0 5/5 1.0 C33H40O20 756.2112937 779.2427
LC-MS unknown 199.9 100.0 4/5 3.0 - - - 948.2439 949.2517
LC-MS Kaempferol-di-rhamnose [2M+Na] 198.8 100.0 5/5 1.0 C27H30O14 578.1635557 1179.3771
LC-MS unknown 198.5 100.0 5/5 1.0 - - - 1006.3265 1007.3343
LC-MS Kaempferol-hexose [fragment] 198.0 99.9 5/5 3.0 C21H20O11 448.1005615 449.1296
LC-MS unknown 197.4 99.9 5/5 1.3 - - - 548.1427 549.1505
LC-MS Isorhamnetin-6-deoxyhexose [fragment] 196.6 99.9 5/5 1.3 C22H22O11 462.1162115 463.1437
LC-MS Quercetin-hexose-6-deoxyhexose 195.8 99.9 5/5 1.2 C27H30O16 610.1534 611.1677
LC-MS unknown 194.4 99.9 4/5 1.0 - - - 691.1553 692.1631
LC-MS unknown 193.4 99.9 5/5 1.0 - - - 710.2060 711.2138
LC-MS Isorhamnetin-hexose-6-deoxyhexose 190.7 99.9 5/5 1.5 C28H32O16 624.169035 625.1892
LC-MS Kaempferol-hexose-di-6-deoxyhexose 189.5 99.9 5/5 1.3 C33H40O19 740.2164 741.2483
LC-MS Kaempferol-di-hexose 187.2 99.9 5/5 1.2 C27H30O16 610.1533849 611.1773
LC-MS Kaempferol-hexose-di-6-deoxyhexose [M+Na] 186.7 99.9 5/5 1.7 C33H40O19 740.2164 763.2439
LC-MS Quercetin-hexose-di-6-deoxyhexose 185.7 99.9 5/5 1.1 C33H40O20 756.2112937 757.2551
LC-MS Kaempferol-di-hexose [M+Na] 181.5 99.9 5/5 1.3 C27H30O16 610.1533849 633.1653
LC-MS unknown 179.8 99.9 4/5 1.3 - - - 1120.4045 1121.4123
LC-MS unknown 175.2 99.9 5/5 1.0 - - - 322.0818 323.0896
LC-MS unknown 170.1 99.9 5/5 1.0 - - - 521.1773 522.1851
LC-MS Quercetin-hexose-di-6-deoxyhexose 169.4 99.9 5/5 1.0 C33H40O20 756.2112937 757.2597
LC-MS Kaempferol-hexose-6-deoxyhexose [fragment(2M)+H] 168.9 99.9 4/5 1.1 C27H30O15 594.1585 1189.3847
LC-MS Kaempferol-hexose 164.6 99.9 5/5 1.3 C21H20O11 448.1005615 449.1141
LC-MS Quercetin-hexose-6-deoxyhexose [2M+Na] 162.7 99.9 5/5 1.0 C27H30O16 610.1534 1243.3618
LC-MS Kaempferol-di-rhamnose 159.6 99.9 5/5 1.4 C27H30O14 578.1635557 579.1817
LC-MS unknown 155.2 99.9 2/5 1.3 - - - 486.1192 487.1270
LC-MS unknown 149.8 99.9 4/5 1.0 - - - 520.1479 521.1557
LC-MS Isorhamnetin-hexose-6-deoxyhexose, putative 149.8 99.9 5/5 1.3 C28H32O16 624.169035 1241.3810
LC-MS Kaempferol-hexose-di-6-deoxyhexose [2M+H] 147.3 99.9 2/5 1.6 C33H40O19 740.2164 1481.5005
LC-MS Kaempferol-hexose-6-deoxyhexose 140.6 99.9 5/5 1.6 C27H30O15 594.1585 595.2135
LC-MS Kaempferol-hexose [2M+Na] 139.8 99.9 5/5 1.0 C21H20O11 448.1005615 919.2315
LC-MS Kaempferol-hexose-6-deoxyhexose [M+Na] 131.9 99.9 5/5 3.0 C27H30O15 594.1585 617.1824
LC-MS unknown 131.4 99.8 5/5 1.2 - - - 534.1191 535.1269
LC-MS unknown 127.7 99.8 5/5 1.4 - - - 138.0367 139.0445
LC-MS Isorhamnetin-hexose [M+Na] 121.2 99.8 5/5 1.0 C22H22O12 478.1111262 501.1406
LC-MS unknown 119.8 99.8 3/5 1.3 - - - 990.3209 991.3287
LC-MS unknown 116.9 99.8 5/5 1.5 - - - 170.0292 171.0370
LC-MS Kaempferol [fragment] 113.7 99.8 5/5 1.4 KPC00643 C05903 C15H10O6 286.0477381 287.0591
LC-MS Kaempferol-hexose-maltose-6-deoxyhexose 111.5 99.8 5/5 1.3 C39H50O25 918.2641172 681.2001
LC-MS unknown 96.8 99.8 1/5 1.1 - - - 736.2286 737.2364
LC-MS Kaempferol-hexose [M+Na] 81.4 99.8 5/5 1.3 C21H20O11 448.1005615 471.0972
LC-MS unknown 81.0 99.8 5/5 1.0 - - - 702.1653 703.1731
LC-MS unknown 77.9 99.8 1/5 1.0 - - - 696.2144 697.2222
LC-MS Kaempferol-di-rhamnose [M+Na] 77.1 99.8 5/5 1.3 C27H30O14 578.1635557 601.1664
LC-MS Kaempferol-6-deoxyhexose 67.1 99.8 4/5 1.0 C21H20O10 432.1056469 433.1298
LC-MS Isorhamnetin-hexose-6-deoxyhexose [M+Na] 52.1 99.7 5/5 1.1 C28H32O16 624.169035 647.1832
LC-MS unknown 48.6 99.7 5/5 2.1 - - - 432.1154 433.1232
LC-MS unknown 42.5 99.7 2/5 1.5 - - - 886.3076 887.3154
LC-MS unknown 39.6 99.7 5/5 1.5 - - - 608.1992 609.2070
LC-MS unknown 39.5 99.7 3/5 1.0 - - - 624.2131 625.2209
LC-MS unknown 38.4 99.6 5/5 1.4 - - - 1502.4679 1503.4757
LC-MS unknown 35.3 99.6 1/5 1.3 - - - 823.3259 824.3337
LC-MS unknown 34.2 99.6 3/5 1.1 - - - 182.0772 183.0850
LC-MS Kaempferol-6-deoxyhexose [fragment] 33.4 99.6 5/5 1.9 C21H20O10 432.1056469 433.1272
LC-MS Kaempferol-hexose-di-6-deoxyhexose 25.0 99.5 5/5 1.9 C33H40O19 740.2164 741.2364
LC-MS unknown 24.3 99.5 4/5 1.5 - - - 759.2104 760.2182
LC-MS Kaempferol-hexose-6-deoxyhexose [fragment] 23.2 99.5 5/5 1.6 C27H30O15 594.1585 595.1785
LC-MS unknown 17.3 99.3 3/5 1.2 - - - 584.2425 585.2503
LC-MS unknown 17.1 99.3 1/5 1.8 - - - 348.0849 349.0927
LC-MS unknown 13.6 99.1 5/5 1.4 - - - 264.1025 265.1103
LC-MS unknown 13.5 99.1 1/5 1.7 - - - 874.3253 875.3331
LC-MS unknown 13.2 99.0 1/5 1.1 - - - 283.0967 284.1045
LC-MS unknown 12.9 99.0 3/5 1.5 - - - 562.2353 563.2431
LC-MS unknown 12.3 99.0 2/5 1.4 - - - 576.2060 577.2138
CE-MS unknown 13.0 99.2 5/5 1.2 - - - 168 167
CE-MS unknown 11.0 99.0 5/5 1.5 - - - 130 131
CE-MS unknown 9.7 98.9 1/5 2.1 - - - 137 138
CE-MS unknown 6.5 98.2 5/5 1.5 - - - 176 175
CE-MS unknown 6.3 98.1 5/5 1.9 - - - 347 348






Back to the RnR portal site

Back to the KAGIANA project homepage