RnR The prediction of regulatory relationships associated with At2g38090

QueryAt2g38090
Descriptionmyb family transcription factor
RAFL IDpda11164
C.R.C
R.O.X.L.7/10 lines
P.O.X. 100.0

Jump to MassBase to obtain the original metabolomics dataset of this over-expression experiment.

Click here to show genes regulating the gene of interest.

Click here to extract genes up-regulated and also co-expressed.

Maroonover-expressed gene
Orangegene
Yellowmetabolite, lipid mode, GC-MS
Cyanmetabolite, polar mode, GC-MS
Bluemetabolite, LC-MS
Greenmetabolite, negative mode, CE-MS
Limegreenmetabolite, positive mode, CE-MS



Candidate elements regulated by At2g38090

Genes

Regulated gene Std.R. P.R. Co-X Gene name/alias
At2g38090 213.8 100.0 1.000 myb family transcription factor
At1g17990 132.3 100.0 0.306 12-oxophytodienoate reductase, putative
At5g02230 47.4 100.0 0.412 haloacid dehalogenase-like hydrolase family protein
At4g22753 46.0 100.0 0.398 SMO1-3 (STEROL 4-ALPHA METHYL OXIDASE 1-3)
At1g69080 42.5 100.0 0.592 universal stress protein (USP) family protein
At1g12180 40.5 100.0 0.191 -
At5g11070 39.2 100.0 0.429 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P
At1g80760 37.7 100.0 0.403 NIP6
At5g22500 35.4 100.0 0.442 FAR1 (FATTY ACID REDUCTASE 1)
At1g11700 33.5 100.0 0.461 F:molecular_function unknown;P:biological_process unknown;C:chloroplast;PO
At1g27030 29.4 100.0 0.553 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BOP
At1g29050 28.8 100.0 0.580 F:unknown;P:biological_process unknown;C:endomembrane system;PO
At5g59310 27.4 99.9 0.384 LTP4 (LIPID TRANSFER PROTEIN 4)
At1g55220 26.5 99.9 0.269 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P
At1g80130 25.9 99.9 0.233 binding
At3g24450 25.5 99.9 0.614 copper-binding family protein
At5g22860 25.3 99.9 0.337 serine carboxypeptidase S28 family protein
At1g21540 24.1 99.9 0.335 AMP-binding protein, putative
At1g31770 24.1 99.9 0.648 ABC transporter family protein
At5g57350 22.2 99.9 0.401 AHA3
At3g17690 20.9 99.9 0.272 ATCNGC19
At1g27040 20.8 99.9 0.264 nitrate transporter, putative
At5g06530 18.9 99.9 0.334 ABC transporter family protein
At2g37640 18.0 99.9 0.371 EXP3
At1g20010 17.9 99.9 0.524 TUB5
At1g56710 17.1 99.9 0.392 glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein
At1g31750 16.9 99.9 0.175 proline-rich family protein
At5g03760 16.1 99.9 0.318 ATCSLA09
At1g68740 16.0 99.9 0.593 EXS family protein / ERD1/XPR1/SYG1 family protein
At4g24120 15.0 99.9 0.431 YSL1 (YELLOW STRIPE LIKE 1)
At5g67460 14.9 99.9 0.454 glycosyl hydrolase family protein 17

Metabolites

Inst. Type Regulated metabolite Std.R. P.R. D.F. D.R. KaPPA-View KEGG Formula Mass Measured mass
GC-MS unknown 24.7 99.7 5/5 2 - - - - 145 88
GC-MS D-Raffinose 16.7 99.4 4/5 2 KPC01369 C00492 C18H32O16 504.169035 217 103 147 129 361
GC-MS unknown 15.0 99.3 5/5 2 - - - - 130 84 203 89 114
GC-MS unknown 13.2 99.1 5/5 2 - - - - 267 355
GC-MS unknown 11.7 98.9 4/5 2 - - - - 103 97 83 383 173
LC-MS unknown 22.0 99.4 4/5 1.5 - - - 590.1822 591.1900
LC-MS unknown 21.5 99.4 3/5 1.3 - - - 214.0059 215.0137
LC-MS unknown 21.5 99.4 3/5 1.6 - - - 786.2560 787.2638
LC-MS unknown 15.2 99.2 3/5 1.4 - - - 576.2060 577.2138
LC-MS unknown 14.5 99.1 1/5 1.8 - - - 334.1067 335.1145
LC-MS unknown 12.8 99.0 4/5 1.7 - - - 970.3723 971.3801
LC-MS unknown 12.7 99.0 1/5 1.3 - - - 598.1728 599.1806
LC-MS unknown 12.4 99.0 1/5 1.4 - - - 350.1037 351.1115
CE-MS unknown 161.9 100.0 3/5 1.3 - - - 467 466
CE-MS unknown 86.8 100.0 3/5 1.7 - - - 463 462
CE-MS unknown 69.0 99.9 4/5 1.0 - - - 322 321
CE-MS unknown 46.7 99.9 1/5 2.0 - - - 489 488
CE-MS unknown 28.2 99.7 5/5 1.5 - - - 523 522
CE-MS unknown 11.4 99.1 5/5 1.5 - - - 117 118






Back to the RnR portal site

Back to the KAGIANA project homepage