RnR The prediction of regulatory relationships associated with At2g27940

QueryAt2g27940
Descriptionzinc finger (C3HC4-type RING finger) family protein
RAFL IDpda11568
C.R.C
R.O.X.L.10/10 lines
P.O.X. 100.0

Jump to MassBase to obtain the original metabolomics dataset of this over-expression experiment.

Click here to show genes regulating the gene of interest.

Click here to extract genes up-regulated and also co-expressed.

Maroonover-expressed gene
Orangegene
Yellowmetabolite, lipid mode, GC-MS
Cyanmetabolite, polar mode, GC-MS
Bluemetabolite, LC-MS
Greenmetabolite, negative mode, CE-MS
Limegreenmetabolite, positive mode, CE-MS



Candidate elements regulated by At2g27940

Genes

Regulated gene Std.R. P.R. Co-X Gene name/alias
At2g27940 213.0 100.0 1.000 zinc finger (C3HC4-type RING finger) family protein
At3g22540 33.3 100.0 0.354 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P
At4g21130 29.1 100.0 0.541 EMB2271 (EMBRYO DEFECTIVE 2271)
At5g06800 27.3 99.9 0.507 myb family transcription factor
At1g77690 26.6 99.9 0.341 LAX3 (LIKE AUX1 3)
At2g37440 25.3 99.9 0.351 endonuclease/exonuclease/phosphatase family protein
At1g51300 23.4 99.9 0.392 acyl-protein thioesterase-related
At2g37430 20.2 99.9 0.087 zinc finger (C2H2 type) family protein (ZAT11)
At2g39410 19.8 99.9 0.482 hydrolase, alpha/beta fold family protein
At5g16570 19.5 99.9 0.265 GLN1
At5g39210 19.1 99.9 0.409 CRR7 (CHLORORESPIRATORY REDUCTION 7)
At1g61630 18.6 99.9 0.288 equilibrative nucleoside transporter, putative (ENT7)
At1g02940 18.5 99.9 0.234 GSTF5 (GLUTATHIONE S-TRANSFERASE (CLASS PHI) 5)
At1g69050 17.5 99.9 0.184 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P
At5g43590 16.0 99.9 0.572 patatin, putative
At5g67390 15.6 99.9 0.416 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO
At3g21230 15.5 99.9 0.311 4CL5 (4-coumarate:CoA ligase 5)
At5g43580 14.8 99.9 0.275 serine-type endopeptidase inhibitor

Metabolites

Inst. Type Regulated metabolite Std.R. P.R. D.F. D.R. KaPPA-View KEGG Formula Mass Measured mass
GC-MS unknown 32.5 99.8 5/5 2 - - - - 117 129 83 96 149
GC-MS unknown 30.0 99.8 2/5 1 - - - - 103 131 143
GC-MS unknown 25.9 99.7 5/5 1 - - - - 210 88 85
GC-MS unknown 22.4 99.7 5/5 2 - - - - 91 129
GC-MS unknown 16.2 99.4 5/5 1 - - - - 91 105 135 134 133
GC-MS unknown 13.9 99.2 5/5 2 - - - - 255 135 165 270
GC-MS unknown 13.9 99.2 3/5 2 - - - - 190 147 332
LC-MS unknown 3.3 95.7 1/5 1.3 - - - 364.0953 365.1031
CE-MS unknown 11.5 99.1 5/5 1.6 - - - 177 176
CE-MS unknown 9.9 98.9 5/5 1.6 - - - 176 175
CE-MS unknown 6.9 98.3 5/5 1.3 - - - 99 100
CE-MS unknown 6.5 98.2 1/5 2.0 - - - 459 458
CE-MS unknown 6.3 98.1 5/5 1.4 - - - 331 332






Back to the RnR portal site

Back to the KAGIANA project homepage