RnR The prediction of regulatory relationships associated with At1g79430

QueryAt1g79430
DescriptionAPL (ALTERED PHLOEM DEVELOPMENT)
RAFL IDpda01478
C.R.C
R.O.X.L.20/22 lines
P.O.X. 100.0

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Maroonover-expressed gene
Orangegene
Yellowmetabolite, lipid mode, GC-MS
Cyanmetabolite, polar mode, GC-MS
Bluemetabolite, LC-MS
Greenmetabolite, negative mode, CE-MS
Limegreenmetabolite, positive mode, CE-MS



Candidate elements regulated by At1g79430

Genes

Regulated gene Std.R. P.R. Co-X Gene name/alias
At1g79430 213.9 100.0 1.000 APL (ALTERED PHLOEM DEVELOPMENT)
At4g15700 210.8 100.0 0.479 glutaredoxin family protein
At4g15680 209.8 100.0 0.457 glutaredoxin family protein
At4g15690 199.7 100.0 0.422 glutaredoxin family protein
At2g30540 194.2 100.0 0.447 glutaredoxin family protein
At2g42850 184.9 100.0 0.227 CYP718
At1g46264 143.7 100.0 0.438 AT-HSFB4
At5g22430 98.1 100.0 0.118 F:molecular_function unknown;P:biological_process unknown;C:anchored to membrane;P
At4g15660 82.4 100.0 0.480 glutaredoxin family protein
At5g59080 71.1 100.0 0.412 F:molecular_function unknown;P:response to oxidative stress;C:chloroplast;P
At3g21510 60.6 100.0 0.389 AHP1 (HISTIDINE-CONTAINING PHOSPHOTRANSMITTER 1)
At2g13160 57.0 100.0 0.188 transposable element gene
At5g65140 57.0 100.0 0.403 trehalose-6-phosphate phosphatase, putative
At4g16980 53.4 100.0 0.502 arabinogalactan-protein family
At4g21590 52.5 100.0 0.172 ENDO3 (endonuclease 3)
At3g03910 51.8 100.0 0.180 GDH3 (GLUTAMATE DEHYDROGENASE 3)
At3g52130 45.1 100.0 0.084 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein
At5g06850 38.8 100.0 0.670 C2 domain-containing protein
At1g22210 37.3 100.0 0.148 trehalose-6-phosphate phosphatase, putative
At4g22050 34.2 100.0 0.130 aspartyl protease family protein
At1g22710 33.8 100.0 0.657 SUC2 (SUCROSE-PROTON SYMPORTER 2)
At5g37500 33.8 100.0 0.433 GORK (GATED OUTWARDLY-RECTIFYING K+ CHANNEL)
At1g09240 33.6 100.0 0.428 NAS3 (NICOTIANAMINE SYNTHASE 3)
At4g15710 32.9 100.0 0.351 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P
At1g68740 31.9 100.0 0.603 EXS family protein / ERD1/XPR1/SYG1 family protein
At1g73630 28.8 100.0 0.331 calcium-binding protein, putative
At1g73620 28.4 100.0 0.237 thaumatin-like protein, putative / pathogenesis-related protein, putative
At1g05770 27.5 100.0 0.652 jacalin lectin family protein
At1g12940 26.3 99.9 0.256 ATNRT2.5 (nitrate transporter2.5)
At4g13860 25.6 99.9 0.347 glycine-rich RNA-binding protein, putative
At1g48750 24.9 99.9 0.376 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein
At1g72570 22.9 99.9 0.124 DNA binding / transcription factor
At3g24770 22.7 99.9 0.654 CLE41 (CLAVATA3/ESR-RELATED 41)
At2g21650 20.6 99.9 0.363 MEE3 (MATERNAL EFFECT EMBRYO ARREST 3)
At3g50890 20.2 99.9 0.379 AtHB28 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 28)
At3g60490 19.8 99.9 0.569 AP2 domain-containing transcription factor TINY, putative
At3g15810 19.2 99.9 0.564 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PF
At5g67390 19.2 99.9 0.489 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO
At4g18570 18.6 99.9 0.539 proline-rich family protein
At1g75820 18.4 99.9 0.654 CLV1 (CLAVATA 1)
At3g42990 18.3 99.9 0.101 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P
At1g31450 17.8 99.9 0.475 aspartyl protease family protein
At1g11610 17.1 99.9 0.288 CYP71A18
At3g52700 16.6 99.9 0.319 F:molecular_function unknown;P:biological_process unknown;C:unknown;P
At1g75390 16.2 99.9 0.370 AtbZIP44 (Arabidopsis thaliana basic leucine-zipper 44)
At1g68430 15.5 99.9 0.792 F:molecular_function unknown;P:biological_process unknown;C:chloroplast;P
At3g15353 15.5 99.9 0.566 MT3 (METALLOTHIONEIN 3)
At1g53420 15.1 99.9 0.209 serine/threonine protein kinase-related
At2g35585 14.6 99.9 0.622 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P
At3g26820 14.6 99.9 0.402 esterase/lipase/thioesterase family protein
At4g24450 14.6 99.9 0.509 PWD (PHOSPHOGLUCAN, WATER DIKINASE)

Metabolites

Inst. Type Regulated metabolite Std.R. P.R. D.F. D.R. KaPPA-View KEGG Formula Mass Measured mass
GC-MS unknown 26.8 99.7 5/5 2 - - - - 127
GC-MS unknown 25.6 99.7 5/5 2 - - - - 147 171 189 99
GC-MS unknown 15.6 99.3 5/5 2 - - - - 147 203
GC-MS unknown 13.0 99.1 5/5 2 - - - - 174 86 228
GC-MS unknown 12.5 99.0 5/5 1 - - - - 87 101 144
LC-MS unknown 5.2 97.4 1/5 1.8 - - - 657.2192 658.2270
LC-MS unknown 4.0 96.5 1/5 1.2 - - - 209.0394 210.0472
LC-MS unknown 3.0 95.3 1/5 1.7 - - - 628.1930 629.2008
LC-MS unknown 2.9 95.1 5/5 1.4 - - - 556.1244 557.1322
CE-MS unknown 39.2 99.9 1/5 2.0 - - - 276 277
CE-MS unknown 20.4 99.5 4/5 1.9 - - - 347 348
CE-MS unknown 18.8 99.5 5/5 1.0 - - - 276 277
CE-MS unknown 18.6 99.5 1/5 1.6 - - - 127 126
CE-MS unknown 16.1 99.4 5/5 1.3 - - - 334 333
CE-MS unknown 15.3 99.4 5/5 1.3 - - - 88 87
CE-MS unknown 14.1 99.3 5/5 1.1 - - - 351 352
CE-MS unknown 13.8 99.3 5/5 1.2 - - - 102 103
CE-MS unknown 13.2 99.2 3/5 1.3 - - - 351 352
CE-MS unknown 13.0 99.2 3/5 1.7 - - - 146 147
CE-MS unknown 12.3 99.2 4/5 1.2 - - - 230 229
CE-MS unknown 12.0 99.1 4/5 1.6 - - - 203 204
CE-MS unknown 11.9 99.1 5/5 1.7 - - - 184 185
CE-MS unknown 11.9 99.1 5/5 1.3 - - - 351 352
CE-MS unknown 11.4 99.1 5/5 1.4 - - - 89 90
CE-MS unknown 10.5 99.0 5/5 1.1 - - - 104 105
CE-MS unknown 10.3 99.0 5/5 1.7 - - - 146 147






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