RnR The prediction of regulatory relationships associated with At1g78950

QueryAt1g78950
Descriptionbeta-amyrin synthase, putative
RAFL IDpda11623
C.R.D
R.O.X.L.18/18 lines
P.O.X. 92.3

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Maroonover-expressed gene
Orangegene
Yellowmetabolite, lipid mode, GC-MS
Cyanmetabolite, polar mode, GC-MS
Bluemetabolite, LC-MS
Greenmetabolite, negative mode, CE-MS
Limegreenmetabolite, positive mode, CE-MS



Candidate elements regulated by At1g78950

Genes

Regulated gene Std.R. P.R. Co-X Gene name/alias
At1g54890 101.7 100.0 0.189 late embryogenesis abundant protein-related / LEA protein-related
At3g47380 99.2 100.0 0.202 invertase/pectin methylesterase inhibitor family protein
At5g03310 92.9 100.0 0.274 auxin-responsive family protein
At5g43590 80.2 100.0 0.352 patatin, putative
At1g65300 75.5 100.0 0.030 AGL38 (AGAMOUS-LIKE 38)
At5g03840 66.6 100.0 0.286 TFL1 (TERMINAL FLOWER 1)
At1g09090 63.7 100.0 0.211 ATRBOHB (respiratory burst oxidase homolog B)
At5g43410 63.0 100.0 0.294 ethylene-responsive factor, putative
At5g10210 62.3 100.0 0.192 -
At1g71890 62.1 100.0 0.328 SUC5
At3g15650 61.7 100.0 0.291 phospholipase/carboxylesterase family protein
At1g49310 57.6 100.0 0.252 F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P
At2g33790 54.6 100.0 0.124 AGP30 (ARABINOGALACTAN PROTEIN30)
At5g40560 52.7 100.0 0.239 DegP13 (DegP protease 13)
At1g49030 49.8 100.0 0.334 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMFO
At3g15353 47.8 100.0 0.313 MT3 (METALLOTHIONEIN 3)
At3g15450 47.1 100.0 0.353 F:molecular_function unknown;P:unknown;C:unknown;PBOMF
At2g40230 44.8 100.0 0.386 transferase family protein
At1g76640 44.7 100.0 0.053 calmodulin-related protein, putative
At1g67110 40.2 100.0 0.308 CYP735A2
At5g67390 38.6 100.0 0.309 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO
At5g49630 38.1 100.0 0.300 AAP6 (AMINO ACID PERMEASE 6)
At5g43580 37.6 100.0 0.197 serine-type endopeptidase inhibitor
At4g36670 36.4 100.0 0.174 mannitol transporter, putative
At5g10230 36.0 100.0 0.042 ANNAT7 (ANNEXIN ARABIDOPSIS 7)
At2g23060 35.9 100.0 0.246 GCN5-related N-acetyltransferase (GNAT) family protein
At1g75580 35.5 100.0 0.395 auxin-responsive protein, putative
At2g46750 34.8 100.0 0.251 FAD-binding domain-containing protein
At1g29090 33.0 100.0 0.076 peptidase C1A papain family protein
At4g32870 32.8 100.0 0.247 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BPO
At3g55150 29.9 100.0 0.219 ATEXO70H1 (exocyst subunit EXO70 family protein H1)
At5g40630 29.9 100.0 0.294 ubiquitin family protein
At1g77380 29.8 100.0 0.257 AAP3
At2g47560 29.6 100.0 0.303 zinc finger (C3HC4-type RING finger) family protein
At4g09820 29.0 100.0 0.147 TT8 (TRANSPARENT TESTA 8)
At1g80520 28.7 100.0 0.475 -
At3g24460 28.7 100.0 0.354 TMS membrane family protein / tumour differentially expressed (TDE) family protein
At1g59740 28.5 100.0 0.341 proton-dependent oligopeptide transport (POT) family protein
At1g71880 28.4 100.0 0.323 SUC1 (Sucrose-proton symporter 1)
At3g51030 27.9 100.0 0.333 ATTRX1
At1g77690 27.7 100.0 0.336 LAX3 (LIKE AUX1 3)
At3g46500 26.3 99.9 0.307 oxidoreductase, 2OG-Fe(II) oxygenase family protein
At4g10380 26.3 99.9 0.303 NIP5
At3g12890 26.0 99.9 0.386 ASML2 (ACTIVATOR OF SPOMIN::LUC2)
At1g67980 25.6 99.9 0.160 CCoAMT
At1g12180 25.5 99.9 0.036 -
At4g27450 24.4 99.9 0.250 F:molecular_function unknown;P:biological_process unknown;C:cytosol, nucleus, plasma membrane;PBOMF
At1g80440 24.2 99.9 0.252 kelch repeat-containing F-box family protein
At3g18560 23.7 99.9 0.291 F:unknown;P:unknown;C:unknown;P
At2g17450 23.3 99.9 0.355 RHA3A
At3g51810 23.0 99.9 0.068 EM1 (LATE EMBRYOGENESIS ABUNDANT 1)
At2g40000 22.9 99.9 0.246 HSPRO2 (ARABIDOPSIS ORTHOLOG OF SUGAR BEET HS1 PRO-1 2)
At3g46800 22.8 99.9 0.380 DC1 domain-containing protein
At5g06170 22.8 99.9 0.317 ATSUC9 (Sucrose-proton symporter 9)
At1g29080 22.3 99.9 0.030 peptidase C1A papain family protein
At4g28090 22.2 99.9 0.416 sks10 (SKU5 Similar 10)
At2g40200 21.2 99.9 0.384 basic helix-loop-helix (bHLH) family protein
At1g61610 21.1 99.9 0.178 S-locus lectin protein kinase family protein
At1g35910 20.2 99.9 0.106 trehalose-6-phosphate phosphatase, putative
At1g34760 19.3 99.9 0.275 GRF11 (GENERAL REGULATORY FACTOR 11)
At2g31070 19.3 99.9 0.351 TCP10 (TCP DOMAIN PROTEIN 10)
At3g50630 19.1 99.9 0.495 KRP2 (KIP-RELATED PROTEIN 2)
At5g60780 19.1 99.9 0.389 ATNRT2.3
At5g16570 19.0 99.9 0.190 GLN1
At1g06420 18.9 99.9 0.193 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMFPB
At3g02940 18.9 99.9 0.280 MYB107 (myb domain protein 107)
At5g64410 18.8 99.9 0.394 OPT4 (OLIGOPEPTIDE TRANSPORTER 4)
At1g21230 18.7 99.9 0.166 WAK5 (WALL ASSOCIATED KINASE 5)
At2g41290 18.1 99.9 0.251 strictosidine synthase family protein
At1g65480 17.9 99.9 0.362 FT (FLOWERING LOCUS T)
At5g52050 17.9 99.9 0.083 MATE efflux protein-related
At1g66230 17.8 99.9 0.340 MYB20 (myb domain protein 20)
At5g23350 17.7 99.9 0.415 GRAM domain-containing protein / ABA-responsive protein-related
At2g26160 17.6 99.9 0.255 -
At5g59810 17.5 99.9 0.147 SBT5.4
At3g23650 17.4 99.9 0.252 protein kinase-related
At5g11320 17.1 99.9 0.352 YUC4 (YUCCA4)
At1g68450 16.9 99.9 0.303 VQ motif-containing protein
At5g53670 16.8 99.9 0.291 F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P
At2g29995 16.7 99.9 0.274 F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P
At3g47800 16.5 99.9 0.303 aldose 1-epimerase family protein
At5g50910 16.5 99.9 0.237 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P
At4g37610 16.3 99.9 0.318 BT5 (BTB AND TAZ DOMAIN PROTEIN 5)
At5g16560 16.0 99.9 0.369 KAN (KANADI)
At2g26960 15.9 99.9 0.296 AtMYB81 (myb domain protein 81)
At1g06520 14.8 99.9 0.377 GPAT1 (GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 1)
At2g06700 14.8 99.9 0.181 transposable element gene
At3g52540 14.8 99.9 0.380 OFP18 (OVATE FAMILY PROTEIN 18)
At4g35480 14.6 99.9 0.279 RHA3B
At5g60890 14.6 99.9 0.279 MYB34 (MYB DOMAIN PROTEIN 34)

Metabolites

Inst. Type Regulated metabolite Std.R. P.R. D.F. D.R. KaPPA-View KEGG Formula Mass Measured mass
GC-MS unknown 22.3 99.6 3/5 1 - - - - 91 83 121 148 161
GC-MS unknown 20.9 99.6 4/5 2 - - - - 155
GC-MS unknown 19.5 99.5 5/5 1 - - - - 144 123 97
GC-MS unknown 18.1 99.5 5/5 2 - - - - 103 101 117 116
GC-MS unknown 18.1 99.5 4/5 2 - - - - 236
GC-MS unknown 17.1 99.4 5/5 2 - - - - 130 114 96
GC-MS Glycine 14.3 99.2 3/5 2 KPC00575 C00037 C2H5NO2 75.03202841 102
GC-MS unknown 14.0 99.2 5/5 1 - - - - 210 88 85
GC-MS unknown 12.6 99.0 5/5 2 - - - - 91 87 119
GC-MS unknown 12.3 99.0 5/5 2 - - - - 100 89 428 171
GC-MS unknown 12.0 99.0 4/5 1 - - - - 147
LC-MS unknown 12.0 98.9 2/5 1.1 - - - 543.1720 544.1798
LC-MS unknown 10.7 98.8 1/5 1.6 - - - 622.1531 623.1609
LC-MS unknown 10.1 98.7 1/5 1.3 - - - 940.2368 941.2446
LC-MS unknown 9.6 98.6 1/5 2.0 - - - 459.1191 460.1269
LC-MS unknown 8.3 98.4 2/5 1.5 - - - 428.0759 429.0837
CE-MS unknown 103.7 100.0 1/5 2.0 - - - 334 333
CE-MS unknown 19.4 99.5 3/5 1.8 - - - 340 339
CE-MS unknown 16.3 99.4 1/5 1.0 - - - 384 383
CE-MS unknown 14.7 99.3 3/5 1.9 - - - 459 460
CE-MS unknown 10.5 99.0 5/5 1.9 - - - 119 120






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