RnR The prediction of regulatory relationships associated with At1g69180

QueryAt1g69180
DescriptionCRC (CRABS CLAW)
RAFL IDpda13381
C.R.C
R.O.X.L.10/10 lines
P.O.X. 100.0

Jump to MassBase to obtain the original metabolomics dataset of this over-expression experiment.

Click here to show genes regulating the gene of interest.

Click here to extract genes up-regulated and also co-expressed.

Maroonover-expressed gene
Orangegene
Yellowmetabolite, lipid mode, GC-MS
Cyanmetabolite, polar mode, GC-MS
Bluemetabolite, LC-MS
Greenmetabolite, negative mode, CE-MS
Limegreenmetabolite, positive mode, CE-MS



Candidate elements regulated by At1g69180

Genes

Regulated gene Std.R. P.R. Co-X Gene name/alias
At1g69180 214.0 100.0 1.000 CRC (CRABS CLAW)
At3g51600 206.0 100.0 0.066 LTP5 (Lipid transfer protein 5)
At5g10220 154.8 100.0 0.016 ANN6 (ANNEXIN ARABIDOPSIS 6)
At1g34245 152.4 100.0 0.123 -
At3g11180 151.3 100.0 0.035 oxidoreductase, 2OG-Fe(II) oxygenase family protein
At5g12050 148.9 100.0 0.050 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMPFB
At5g38180 148.5 100.0 0.008 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein
At1g74670 139.4 100.0 0.104 gibberellin-responsive protein, putative
At3g03240 134.7 100.0 0.028 esterase/lipase/thioesterase family protein
At2g03190 117.9 100.0 0.012 ASK16 (ARABIDOPSIS SKP1-LIKE 16)
At1g21970 116.6 100.0 0.009 LEC1 (LEAFY COTYLEDON 1)
At4g33330 112.4 100.0 0.047 transferase, transferring glycosyl groups
At5g07260 108.5 100.0 0.024 homeobox protein-related
At5g03810 106.9 100.0 0.069 carboxylesterase/ hydrolase, acting on ester bonds / lipase
At1g04380 102.1 100.0 0.050 2-oxoglutarate-dependent dioxygenase, putative
At1g75250 97.4 100.0 0.035 ATRL6 (ARABIDOPSIS RAD-LIKE 6)
At1g28300 89.9 100.0 0.018 LEC2 (LEAFY COTYLEDON 2)
At3g27785 88.5 100.0 0.054 MYB118
At1g08630 87.6 100.0 0.090 THA1 (Threonine Aldolase 1)
At5g07200 76.6 100.0 0.013 YAP169
At3g25260 75.6 100.0 0.072 proton-dependent oligopeptide transport (POT) family protein
At1g32540 75.2 100.0 0.179 LOL1 (LSD ONE LIKE 1)
At3g03230 73.4 100.0 0.049 esterase/lipase/thioesterase family protein
At1g55265 69.9 100.0 0.102 F:unknown;P:biological_process unknown;C:vacuole;PBO
At3g26744 68.8 100.0 0.198 ICE1 (INDUCER OF CBF EXPRESSION 1)
At5g53210 68.7 100.0 0.148 SPCH (SPEECHLESS)
At1g15150 67.6 100.0 0.047 MATE efflux family protein
At3g05890 67.5 100.0 0.025 RCI2B (RARE-COLD-INDUCIBLE 2B)
At5g25110 67.5 100.0 0.026 CIPK25 (CBL-INTERACTING PROTEIN KINASE 25)
At3g25640 66.6 100.0 0.504 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P
At1g12080 65.1 100.0 0.085 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOBFPVA
At4g04460 62.7 100.0 0.146 aspartyl protease family protein
At4g10490 61.4 100.0 0.084 oxidoreductase, 2OG-Fe(II) oxygenase family protein
At2g23000 60.8 100.0 0.096 scpl10 (serine carboxypeptidase-like 10)
At5g57785 60.2 100.0 0.279 F:molecular_function unknown;P:biological_process unknown;C:unknown;P
At3g11930 58.4 100.0 0.063 universal stress protein (USP) family protein
At1g23010 58.0 100.0 0.365 LPR1 (Low Phosphate Root1)
At1g13420 54.4 100.0 0.017 ST4B (SULFOTRANSFERASE 4B)
At2g02780 53.6 100.0 0.187 leucine-rich repeat transmembrane protein kinase, putative
At1g33055 53.2 100.0 0.028 F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P
At2g37390 51.9 100.0 0.166 heavy-metal-associated domain-containing protein
At3g54940 51.3 100.0 0.008 -
At3g29970 50.7 100.0 0.034 germination protein-related
At4g21750 50.5 100.0 0.206 ATML1 (MERISTEM LAYER 1)
At5g13600 50.5 100.0 0.077 phototropic-responsive NPH3 family protein
At5g02580 50.3 100.0 0.061 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO
At3g60520 48.9 100.0 0.087 F:unknown;P:biological_process unknown;C:cellular_component unknown;P
At1g22590 47.9 100.0 0.108 MADS-box family protein
At3g25290 45.5 100.0 0.065 auxin-responsive family protein
At5g56300 44.7 100.0 0.061 GAMT2 (GIBBERELLIC ACID METHYLTRANSFERASE 2)
At5g38170 44.3 100.0 0.014 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein
At1g05280 44.2 100.0 0.035 fringe-related protein
At1g78340 43.1 100.0 0.014 ATGSTU22 (GLUTATHIONE S-TRANSFERASE TAU 22)
At4g29230 43.1 100.0 0.067 anac075 (Arabidopsis NAC domain containing protein 75)
At2g43870 42.1 100.0 0.032 polygalacturonase, putative / pectinase, putative
At1g14580 41.9 100.0 0.053 zinc finger (C2H2 type) family protein
At5g46230 41.8 100.0 0.062 F:unknown;P:biological_process unknown;C:cellular_component unknown;P
At2g39690 41.5 100.0 0.096 F:molecular_function unknown;P:biological_process unknown;C:unknown;PBMO
At2g25810 41.4 100.0 0.073 TIP4
At3g26300 39.5 100.0 0.134 CYP71B34
At5g50470 39.0 100.0 0.098 NF-YC7 (NUCLEAR FACTOR Y, SUBUNIT C7)
At3g42390 38.8 100.0 0.043 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P
At2g38920 38.1 100.0 0.071 SPX (SYG1/Pho81/XPR1) domain-containing protein / zinc finger (C3HC4-type RING finger) protein-related
At1g63020 37.6 100.0 0.233 NRPD1A (NUCLEAR RNA POLYMERASE D 1A)
At1g66400 37.4 100.0 0.053 calmodulin-related protein, putative
At4g22790 37.2 100.0 0.109 MATE efflux family protein
At4g15490 36.3 100.0 0.096 UGT84A3
At5g38160 36.3 100.0 0.011 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein
At3g61930 35.3 100.0 0.022 F:molecular_function unknown;P:N-terminal protein myristoylation;C:unknown;P
At2g25940 35.2 100.0 0.028 ALPHA-VPE (alpha-vacuolar processing enzyme)
At4g28365 34.9 100.0 0.011 plastocyanin-like domain-containing protein
At2g30340 34.4 100.0 0.026 LBD13 (LOB DOMAIN-CONTAINING PROTEIN 13)
At1g42200 34.1 100.0 0.068 transposable element gene
At5g13790 33.4 100.0 0.091 AGL15 (AGAMOUS-LIKE 15)
At4g33070 32.1 100.0 0.015 pyruvate decarboxylase, putative
At2g34700 31.9 100.0 0.019 pollen Ole e 1 allergen and extensin family protein
At5g48900 31.7 100.0 0.152 pectate lyase family protein
At5g15230 31.6 100.0 0.160 GASA4 (GAST1 PROTEIN HOMOLOG 4)
At3g12820 31.3 100.0 0.079 AtMYB10 (myb domain protein 10)
At5g47550 31.0 100.0 0.106 cysteine protease inhibitor, putative / cystatin, putative
At3g26790 30.9 100.0 0.045 FUS3 (FUSCA 3)
At4g37050 30.3 100.0 0.055 PLP4 (PATATIN-LIKE PROTEIN 4)
At5g14730 30.1 100.0 0.014 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PB
At1g60160 30.0 100.0 0.221 potassium transporter family protein
At5g40420 29.8 100.0 0.005 OLEO2 (OLEOSIN 2)
At3g14630 29.6 100.0 0.082 CYP72A9
At1g14550 29.4 100.0 0.028 anionic peroxidase, putative
At2g34870 29.3 100.0 0.108 MEE26 (maternal effect embryo arrest 26)
At5g47050 29.3 100.0 0.078 protein binding / zinc ion binding
At4g18425 29.1 100.0 0.088 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P
At1g05680 28.6 100.0 0.037 UDP-glucoronosyl/UDP-glucosyl transferase family protein
At5g09640 28.6 100.0 0.021 SCPL19
At1g80100 28.5 100.0 0.162 AHP6 (ARABIDOPSIS HISTIDINE PHOSPHOTRANSFER PROTEIN 6)
At3g45130 28.3 100.0 0.087 LAS1
At5g20810 28.2 100.0 0.045 auxin-responsive protein, putative / small auxin up RNA (SAUR_B)
At1g11000 26.8 99.9 0.112 MLO4 (MILDEW RESISTANCE LOCUS O 4)
At5g23210 26.5 99.9 0.064 SCPL34
At5g10230 26.4 99.9 0.013 ANNAT7 (ANNEXIN ARABIDOPSIS 7)
At5g51060 25.9 99.9 0.045 RHD2 (ROOT HAIR DEFECTIVE 2)
At3g19850 25.8 99.9 0.073 phototropic-responsive NPH3 family protein
At1g10540 25.5 99.9 0.124 xanthine/uracil permease family protein
At1g55200 25.4 99.9 0.244 protein kinase family protein
At2g45590 25.4 99.9 0.167 protein kinase family protein
At1g01140 25.3 99.9 0.135 CIPK9 (CBL-INTERACTING PROTEIN KINASE 9)
At1g17960 25.2 99.9 0.068 threonyl-tRNA synthetase, putative / threonine--tRNA ligase, putative
At5g51500 25.2 99.9 0.031 pectinesterase family protein
At1g62570 25.0 99.9 0.032 FMO GS-OX4 (FLAVIN-MONOOXYGENASE GLUCOSINOLATE S-OXYGENASE 4)
At4g04890 24.8 99.9 0.245 PDF2 (PROTODERMAL FACTOR 2)
At2g02070 24.6 99.9 0.134 AtIDD5 (Arabidopsis thaliana Indeterminate(ID)-Domain 5)
At5g41810 24.5 99.9 0.143 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMFPBV
At5g13170 24.4 99.9 0.037 SAG29 (SENESCENCE-ASSOCIATED PROTEIN 29)
At5g26731 24.3 99.9 0.385 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P
At1g75050 24.2 99.9 0.152 -
At1g19450 23.8 99.9 0.081 integral membrane protein, putative / sugar transporter family protein
At1g09790 23.7 99.9 0.088 COBL6 (COBRA-LIKE PROTEIN 6 PRECURSOR)
At1g62580 23.7 99.9 0.102 flavin-containing monooxygenase family protein / FMO family protein
At4g38000 23.7 99.9 0.154 Dof-type zinc finger domain-containing protein
At5g13670 22.9 99.9 0.075 nodulin MtN21 family protein
At5g65410 22.7 99.9 0.265 HB25 (HOMEOBOX PROTEIN 25)
At5g66170 22.7 99.9 0.039 -
At1g75590 22.4 99.9 0.239 auxin-responsive family protein
At2g10050 22.4 99.9 0.039 transposable element gene
At1g59700 22.3 99.9 0.100 ATGSTU16 (GLUTATHIONE S-TRANSFERASE TAU 16)
At4g25260 22.2 99.9 0.048 invertase/pectin methylesterase inhibitor family protein
At3g45010 21.7 99.9 0.110 scpl48 (serine carboxypeptidase-like 48)
At3g10520 21.6 99.9 0.048 AHB2 (ARABIDOPSIS HAEMOGLOBIN 2)
At1g19250 21.4 99.9 0.016 FMO1 (FLAVIN-DEPENDENT MONOOXYGENASE 1)
At1g54860 21.4 99.9 0.023 F:molecular_function unknown;P:biological_process unknown;C:anchored to membrane;P
At3g25655 21.1 99.9 0.041 IDL1 (INFLORESCENCE DEFICIENT IN ABSCISSION (IDA)-LIKE 1)
At1g44760 21.0 99.9 0.340 universal stress protein (USP) family protein
At2g23800 20.7 99.9 0.107 GGPS2 (GERANYLGERANYL PYROPHOSPHATE SYNTHASE 2)
At3g53280 20.7 99.9 0.059 CYP71B5 (CYTOCHROME P450 71B5)
At1g55560 20.6 99.9 0.028 sks14 (SKU5 Similar 14)
At2g39850 20.6 99.9 0.070 identical protein binding / serine-type endopeptidase
At1g07180 20.4 99.9 0.034 NDA1 (ALTERNATIVE NAD(P)H DEHYDROGENASE 1)
At1g34904 19.9 99.9 0.079 transposable element gene
At3g50440 19.9 99.9 0.120 MES10 (METHYL ESTERASE 10)
At4g33666 19.7 99.9 0.047 F:molecular_function unknown;P:biological_process unknown;C:chloroplast;P
At2g11165 19.5 99.9 0.064 transposable element gene
At3g46700 18.9 99.9 0.024 UDP-glycosyltransferase/ transferase, transferring glycosyl groups
At4g26770 18.9 99.9 0.087 phosphatidate cytidylyltransferase/ transferase, transferring phosphorus-containing groups
At5g60760 18.9 99.9 0.052 2-phosphoglycerate kinase-related
At1g48930 18.8 99.9 0.017 AtGH9C1 (Arabidopsis thaliana glycosyl hydrolase 9C1)
At5g59070 18.8 99.9 0.034 glycosyl transferase family 1 protein
At5g50260 18.7 99.9 0.051 cysteine proteinase, putative
At5g65590 18.7 99.9 0.120 Dof-type zinc finger domain-containing protein
At4g36380 18.6 99.9 0.084 ROT3 (ROTUNDIFOLIA 3)
At3g18960 18.5 99.9 0.361 transcriptional factor B3 family protein
At4g10270 18.5 99.9 0.114 wound-responsive family protein
At1g15380 18.3 99.9 0.038 lactoylglutathione lyase family protein / glyoxalase I family protein
At5g41070 18.1 99.9 0.238 DRB5 (DSRNA-BINDING PROTEIN 5)
At2g34960 18.0 99.9 0.124 CAT5 (CATIONIC AMINO ACID TRANSPORTER 5)
At3g20210 18.0 99.9 0.037 DELTA-VPE
At5g03670 17.9 99.9 0.186 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFPVB
At1g68510 17.8 99.9 0.044 LBD42 (LOB DOMAIN-CONTAINING PROTEIN 42)
At5g16230 17.8 99.9 0.032 acyl-(acyl-carrier-protein) desaturase, putative / stearoyl-ACP desaturase, putative
At1g28660 17.6 99.9 0.036 lipase, putative
At4g14690 17.6 99.9 0.056 ELIP2 (EARLY LIGHT-INDUCIBLE PROTEIN 2)
At1g09470 17.5 99.9 0.166 F:molecular_function unknown;P:unknown;C:unknown;MOBFPAV
At5g50915 17.4 99.9 0.147 basic helix-loop-helix (bHLH) family protein
At2g27690 17.3 99.9 0.013 CYP94C1
At5g28020 17.3 99.9 0.061 CYSD2 (CYSTEINE SYNTHASE D2)
At3g29410 17.2 99.9 0.031 terpene synthase/cyclase family protein
At3g48580 17.1 99.9 0.057 xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative
At1g28640 16.9 99.9 0.097 GDSL-motif lipase, putative
At5g48650 16.9 99.9 0.288 nuclear transport factor 2 (NTF2) family protein / RNA recognition motif (RRM)-containing protein
At5g49660 16.9 99.9 0.064 leucine-rich repeat transmembrane protein kinase, putative
At2g30990 16.8 99.9 0.077 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OPMBF
At4g00480 16.8 99.9 0.143 myc-related transcription factor (MYC1)
At1g09380 16.6 99.9 0.044 integral membrane family protein / nodulin MtN21-related
At2g36400 16.6 99.9 0.234 AtGRF3 (GROWTH-REGULATING FACTOR 3)
At2g15410 16.5 99.9 0.095 transposable element gene
At2g22980 16.5 99.9 0.118 serine-type carboxypeptidase
At1g26920 16.4 99.9 0.077 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PFO
At2g32460 16.3 99.9 0.034 MYB101
At3g58740 16.2 99.9 0.021 CSY1 (CITRATE SYNTHASE 1)
At5g27350 16.2 99.9 0.031 SFP1
At5g10140 16.1 99.9 0.039 FLC (FLOWERING LOCUS C)
At1g68520 16.0 99.9 0.046 zinc finger (B-box type) family protein
At4g05490 16.0 99.9 0.079 F-box family protein (FBL22)
At4g30060 16.0 99.9 0.050 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POB
At4g02090 15.9 99.9 0.008 F:molecular_function unknown;P:N-terminal protein myristoylation;C:cellular_component unknown;P
At5g67110 15.9 99.9 0.306 ALC (ALCATRAZ)
At1g72800 15.7 99.9 0.086 nuM1-related
At5g03800 15.6 99.9 0.077 EMB175 (EMBRYO DEFECTIVE 175)
At1g09500 15.2 99.9 0.037 cinnamyl-alcohol dehydrogenase family / CAD family
At2g16630 15.1 99.9 0.128 proline-rich family protein
At3g29250 15.1 99.9 0.018 copper ion binding / oxidoreductase
At5g64780 15.0 99.9 0.107 -
At3g47270 14.9 99.9 0.061 transposable element gene
At4g27450 14.9 99.9 0.078 F:molecular_function unknown;P:biological_process unknown;C:cytosol, nucleus, plasma membrane;PBOMF
At1g12935 14.8 99.9 0.079 transposable element gene
At5g40960 14.6 99.9 0.073 F:molecular_function unknown;P:biological_process unknown;C:anchored to membrane;P

Metabolites

Inst. Type Regulated metabolite Std.R. P.R. D.F. D.R. KaPPA-View KEGG Formula Mass Measured mass
GC-MS unknown 48.2 99.9 5/5 1 - - - - 116 147
GC-MS unknown 36.5 99.9 5/5 2 - - - - 92
GC-MS unknown 26.9 99.7 5/5 2 - - - - 131 116 144
GC-MS unknown 19.3 99.5 5/5 2 - - - - 91 473 115 229
GC-MS unknown 17.7 99.5 1/5 1 - - - - 144 123 97
GC-MS unknown 12.0 99.0 4/5 1 - - - - 147 204 217 103
LC-MS unknown 17.3 99.3 1/5 1.3 - - - 718.2213 719.2291
LC-MS unknown 16.7 99.3 1/5 1.8 - - - 348.0849 349.0927
LC-MS unknown 8.5 98.5 1/5 1.2 - - - 209.0394 210.0472
LC-MS unknown 7.9 98.3 1/5 1.3 - - - 147.0516 148.0594
LC-MS unknown 5.9 97.7 1/5 1.5 - - - 310.1227 311.1305
CE-MS unknown 109.0 100.0 4/5 1.1 - - - 307 308
CE-MS unknown 22.4 99.6 5/5 1.3 - - - 331 332
CE-MS unknown 20.7 99.6 5/5 1.4 - - - 125 126
CE-MS unknown 19.4 99.5 5/5 1.8 - - - 200 199
CE-MS unknown 13.2 99.2 5/5 1.4 - - - 213 214
CE-MS unknown 12.6 99.2 5/5 1.5 - - - 125 126
CE-MS unknown 11.5 99.1 5/5 1.2 - - - 101 102
CE-MS unknown 11.2 99.1 5/5 1.1 - - - 181 182
CE-MS unknown 10.4 99.0 5/5 1.2 - - - 507 506
CE-MS unknown 10.4 99.0 2/5 2.0 - - - 177 178






Back to the RnR portal site

Back to the KAGIANA project homepage