RnR The prediction of regulatory relationships associated with At1g62990

QueryAt1g62990
DescriptionKNAT7 (KNOTTED-LIKE HOMEOBOX OF ARABIDOPSIS THALIANA 7)
RAFL IDpda11355
C.R.S
R.O.X.L.10/10 lines
P.O.X. 100.0

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Click here to extract genes up-regulated and also co-expressed.

Maroonover-expressed gene
Orangegene
Yellowmetabolite, lipid mode, GC-MS
Cyanmetabolite, polar mode, GC-MS
Bluemetabolite, LC-MS
Greenmetabolite, negative mode, CE-MS
Limegreenmetabolite, positive mode, CE-MS



Candidate elements regulated by At1g62990

Genes

Regulated gene Std.R. P.R. Co-X Gene name/alias
At1g62990 213.0 100.0 1.000 KNAT7 (KNOTTED-LIKE HOMEOBOX OF ARABIDOPSIS THALIANA 7)
At3g28510 137.9 100.0 0.073 AAA-type ATPase family protein
At1g55560 94.4 100.0 0.023 sks14 (SKU5 Similar 14)
At2g15410 87.6 100.0 0.197 transposable element gene
At1g69730 85.7 100.0 0.149 protein kinase family protein
At1g37110 79.1 100.0 0.045 transposable element gene
At1g51920 68.3 100.0 0.102 F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P
At2g14130 60.9 100.0 0.085 transposable element gene
At1g71530 51.0 100.0 0.180 protein kinase family protein
At3g47270 47.9 100.0 0.042 transposable element gene
At1g63180 45.2 100.0 0.238 UGE3 (UDP-D-glucose/UDP-D-galactose 4-epimerase 3)
At3g30450 44.9 100.0 0.057 transposable element gene
At1g72060 43.8 100.0 0.113 serine-type endopeptidase inhibitor
At4g03440 43.1 100.0 0.156 ankyrin repeat family protein
At3g29370 42.7 100.0 0.218 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P
At5g59070 40.7 100.0 0.143 glycosyl transferase family 1 protein
At2g02200 40.4 100.0 0.043 transposable element gene
At1g20390 39.7 100.0 0.194 transposable element gene
At5g34895 37.4 100.0 0.046 transposable element gene
At5g30450 36.8 100.0 0.093 transposable element gene
At5g18510 34.0 100.0 0.149 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOF
At3g48640 31.6 100.0 0.058 F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P
At1g16150 30.9 100.0 0.189 WAKL4 (WALL ASSOCIATED KINASE-LIKE 4)
At1g47660 30.6 100.0 0.064 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OBPMFVA
At1g67980 30.4 100.0 0.134 CCoAMT
At2g02210 30.1 100.0 0.078 transposable element gene
At1g61480 26.7 99.9 0.267 S-locus protein kinase, putative
At1g19530 25.6 99.9 0.186 F:molecular_function unknown;P:N-terminal protein myristoylation;C:cellular_component unknown;P
At2g16060 25.5 99.9 0.138 AHB1 (ARABIDOPSIS HEMOGLOBIN 1)
At3g32900 25.5 99.9 0.095 transposable element gene
At1g59930 25.4 99.9 0.153 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P
At3g32100 24.0 99.9 0.051 F:molecular_function unknown;P:biological_process unknown;C:chloroplast;P
At3g59930 23.3 99.9 0.169 -
At5g42830 22.5 99.9 0.170 transferase family protein
At5g34900 22.0 99.9 0.154 transposable element gene
At1g17615 21.9 99.9 0.075 disease resistance protein (TIR-NBS class), putative
At3g13065 20.8 99.9 0.044 SRF4 (STRUBBELIG-RECEPTOR FAMILY 4)
At3g49780 20.3 99.9 0.267 ATPSK4 (PHYTOSULFOKINE 4 PRECURSOR)
At1g19250 20.1 99.9 0.095 FMO1 (FLAVIN-DEPENDENT MONOOXYGENASE 1)
At1g21100 19.6 99.9 0.216 O-methyltransferase, putative
At5g23210 19.6 99.9 0.266 SCPL34
At2g04670 19.3 99.9 0.058 transposable element gene
At5g47980 19.1 99.9 0.188 transferase family protein
At1g80590 18.9 99.9 0.249 WRKY66
At3g48080 18.0 99.9 0.205 lipase class 3 family protein / disease resistance protein-related
At1g32840 17.9 99.9 0.093 transposable element gene
At1g01480 17.8 99.9 0.079 ACS2
At3g51350 17.8 99.9 0.200 aspartyl protease family protein
At5g11420 17.8 99.9 0.168 -
At1g68560 17.7 99.9 0.200 XYL1 (ALPHA-XYLOSIDASE 1)
At3g28540 17.7 99.9 0.129 AAA-type ATPase family protein
At2g15790 17.3 99.9 0.229 SQN (SQUINT)
At1g33540 16.8 99.9 0.202 scpl18 (serine carboxypeptidase-like 18)
At1g35770 16.8 99.9 0.044 transposable element gene
At1g19610 16.7 99.9 0.073 PDF1.4
At1g42560 16.5 99.9 0.146 MLO9 (MILDEW RESISTANCE LOCUS O 9)
At2g17880 16.0 99.9 0.121 DNAJ heat shock protein, putative
At3g45650 15.9 99.9 0.257 NAXT1 (NITRATE EXCRETION TRANSPORTER1)
At3g62690 15.9 99.9 0.303 ATL5 (ATL5)
At5g23220 15.9 99.9 0.220 NIC3 (NICOTINAMIDASE 3)
At2g12520 15.7 99.9 0.036 transposable element gene
At1g64660 15.5 99.9 0.274 ATMGL (ARABIDOPSIS THALIANA METHIONINE GAMMA-LYASE)
At3g27070 15.3 99.9 0.139 TOM20-1 (translocase outer membrane 20-1)
At1g43920 15.1 99.9 0.248 transposable element gene
At1g50060 15.1 99.9 0.088 pathogenesis-related protein, putative
At1g69720 15.0 99.9 0.169 ho3 (HEME OXYGENASE 3)
At5g46050 14.8 99.9 0.147 PTR3 (PEPTIDE TRANSPORTER 3)
At3g30846 14.7 99.9 0.076 transposable element gene
At3g29210 14.6 99.9 0.059 transposable element gene

Metabolites

Inst. Type Regulated metabolite Std.R. P.R. D.F. D.R. KaPPA-View KEGG Formula Mass Measured mass
GC-MS unknown 49.4 99.9 5/5 2 - - - - 100 129
GC-MS unknown 39.3 99.9 5/5 2 - - - - 147 227 128 203
GC-MS unknown 29.9 99.8 5/5 2 - - - - 100 188
GC-MS L-Alanine 27.0 99.7 5/5 1 KPC00666 C00041 C3H7NO2 89.04767848 100 188 147 133 114
GC-MS unknown 26.2 99.7 5/5 2 - - - - 128 119 91
GC-MS unknown 19.6 99.6 5/5 2 - - - - 147
GC-MS unknown 19.4 99.5 5/5 2 - - - - 89 100 130 248
GC-MS unknown 18.7 99.5 5/5 2 - - - - 172 89 129
GC-MS unknown 15.6 99.3 5/5 2 - - - - 110 131 89 169
GC-MS unknown 15.1 99.3 1/5 2 - - - - 174 86 100
GC-MS unknown 13.4 99.1 5/5 1 - - - - 128 110 100
GC-MS unknown 13.3 99.1 4/5 2 - - - - 190 147 332
GC-MS unknown 12.3 99.0 5/5 1 - - - - 147 119
GC-MS unknown 12.1 99.0 5/5 1 - - - - 174 86 100 114
LC-MS unknown 96.9 99.8 2/5 1.0 - - - 730.1832 731.1910
LC-MS unknown 79.6 99.8 1/5 1.5 - - - 604.1999 605.2077
LC-MS unknown 48.3 99.7 2/5 1.9 - - - 1003.3158 1004.3236
LC-MS unknown 43.4 99.7 1/5 2.0 - - - 768.2774 769.2852
LC-MS unknown 42.6 99.7 2/5 1.3 - - - 452.1303 453.1381
LC-MS unknown 41.7 99.7 1/5 1.4 - - - 700.2094 701.2172
LC-MS unknown 28.0 99.5 2/5 1.3 - - - 606.2143 607.2221
LC-MS unknown 26.2 99.5 1/5 1.2 - - - 590.1881 591.1959
LC-MS unknown 21.4 99.4 2/5 1.7 - - - 588.2192 589.2270
LC-MS unknown 20.3 99.4 2/5 1.4 - - - 192.0521 193.0599
LC-MS unknown 18.5 99.3 2/5 1.7 - - - 679.2109 680.2187
LC-MS unknown 16.5 99.2 1/5 1.5 - - - 544.2275 545.2353
LC-MS unknown 16.3 99.2 1/5 1.3 - - - 625.2285 626.2363
LC-MS unknown 15.7 99.2 1/5 1.5 - - - 562.2353 563.2431
LC-MS unknown 14.6 99.1 2/5 1.7 - - - 914.3194 915.3272
LC-MS unknown 12.8 99.0 3/5 1.8 - - - 657.2192 658.2270
LC-MS unknown 12.3 99.0 1/5 1.0 - - - 574.2024 575.2102
LC-MS unknown 12.2 99.0 1/5 1.5 - - - 630.2814 631.2892
LC-MS unknown 12.1 99.0 2/5 1.3 - - - 940.2368 941.2446
CE-MS unknown 27.4 99.7 5/5 1.2 - - - 168 167
CE-MS unknown 15.7 99.4 5/5 1.5 - - - 118 117
CE-MS unknown 6.6 98.2 5/5 1.3 - - - 88 87
CE-MS unknown 6.1 98.0 4/5 1.9 - - - 459 460
CE-MS unknown 5.4 97.7 1/5 1.4 - - - 187 186






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