RnR The prediction of regulatory relationships associated with At1g62300

QueryAt1g62300
DescriptionWRKY6
RAFL IDpda04842
C.R.F
R.O.X.L.5/8 lines
P.O.X. 99.5

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Click here to extract genes up-regulated and also co-expressed.

Maroonover-expressed gene
Orangegene
Yellowmetabolite, lipid mode, GC-MS
Cyanmetabolite, polar mode, GC-MS
Bluemetabolite, LC-MS
Greenmetabolite, negative mode, CE-MS
Limegreenmetabolite, positive mode, CE-MS



Candidate elements regulated by At1g62300

Genes

Regulated gene Std.R. P.R. Co-X Gene name/alias
At2g30430 48.4 100.0 0.133 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P
At4g16447 29.1 100.0 0.273 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P
At1g73040 25.0 99.9 0.179 jacalin lectin family protein
At1g15990 24.9 99.9 0.132 ATCNGC7 (CYCLIC NUCLEOTIDE GATED CHANNEL 7)
At1g47280 23.9 99.9 0.020 F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P
At1g20190 23.2 99.9 0.237 ATEXPA11 (ARABIDOPSIS THALIANA EXPANSIN 11)
At2g33160 20.9 99.9 0.120 glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein
At5g04970 19.6 99.9 0.264 pectinesterase, putative
At4g03153 19.3 99.9 0.194 kinase interacting family protein
At1g63560 18.9 99.9 0.237 -
At2g23050 17.5 99.9 0.261 NPY4 (NAKED PINS IN YUC MUTANTS 4)
At2g07650 16.5 99.9 0.092 transposable element gene
At4g05300 16.5 99.9 0.186 transposable element gene
At3g30490 16.1 99.9 0.103 transposable element gene
At1g78390 16.0 99.9 0.249 NCED9 (NINE-CIS-EPOXYCAROTENOID DIOXYGENASE 9)
At3g01630 16.0 99.9 0.032 -
At2g20510 15.9 99.9 0.174 ATTIM44-1
At3g06120 15.6 99.9 0.174 MUTE (MUTE)
At1g34330 15.5 99.9 0.201 -
At1g26480 14.6 99.9 0.028 GRF12 (GENERAL REGULATORY FACTOR 12)
At1g34240 14.6 99.9 0.094 transposable element gene

Metabolites

Inst. Type Regulated metabolite Std.R. P.R. D.F. D.R. KaPPA-View KEGG Formula Mass Measured mass
GC-MS unknown 27.7 99.8 5/5 2 - - - - 131 147
GC-MS unknown 20.2 99.6 5/5 2 - - - - 131
GC-MS unknown 18.3 99.5 5/5 1 - - - - 147 119
GC-MS unknown 17.0 99.4 5/5 1 - - - - 210 88 85
GC-MS unknown 16.3 99.4 5/5 1 - - - - 103 147 205 319
GC-MS unknown 14.6 99.2 5/5 2 - - - - 221 147 295 207
GC-MS unknown 14.2 99.2 5/5 2 - - - - 116 259
GC-MS unknown 13.6 99.1 3/5 3 - - - - 204 296 331 173 103
GC-MS unknown 13.5 99.1 5/5 1 - - - - 85 99 113
LC-MS unknown 8.1 98.4 4/5 1.2 - - - 209.0394 210.0472
CE-MS unknown 24.2 99.7 4/5 1.5 - - - 307 308
CE-MS unknown 23.4 99.6 5/5 1.5 - - - 309 310
CE-MS unknown 10.4 99.0 5/5 1.6 - - - 304 303
CE-MS unknown 9.7 98.9 1/5 1.9 - - - 138 139
CE-MS unknown 9.5 98.9 5/5 1.5 - - - 260 259






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