RnR The prediction of regulatory relationships associated with At1g56170

QueryAt1g56170
DescriptionNF-YC2 (NUCLEAR FACTOR Y, SUBUNIT C2)
RAFL IDpda08530
C.R.C
R.O.X.L.11/11 lines
P.O.X. 100.0

Jump to MassBase to obtain the original metabolomics dataset of this over-expression experiment.

Click here to show genes regulating the gene of interest.

Click here to extract genes up-regulated and also co-expressed.

Maroonover-expressed gene
Orangegene
Yellowmetabolite, lipid mode, GC-MS
Cyanmetabolite, polar mode, GC-MS
Bluemetabolite, LC-MS
Greenmetabolite, negative mode, CE-MS
Limegreenmetabolite, positive mode, CE-MS



Candidate elements regulated by At1g56170

Genes

Regulated gene Std.R. P.R. Co-X Gene name/alias
At1g56170 114.4 100.0 1.000 NF-YC2 (NUCLEAR FACTOR Y, SUBUNIT C2)
At4g00890 66.0 100.0 0.061 proline-rich family protein
At1g46912 34.1 100.0 0.113 F-box family protein-related
At2g30130 27.8 100.0 0.112 ASL5
At5g48280 27.1 99.9 0.153 F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P
At5g35090 21.3 99.9 0.042 F:unknown;P:unknown;C:cellular_component unknown;P
At3g47240 18.5 99.9 0.117 transposable element gene
At1g62440 17.6 99.9 0.144 LRX2 (LEUCINE-RICH REPEAT/EXTENSIN 2)
At5g58780 17.3 99.9 0.176 dehydrodolichyl diphosphate synthase, putative / DEDOL-PP synthase, putative
At1g68600 17.2 99.9 0.165 F:unknown;P:biological_process unknown;C:cellular_component unknown;BPFO
At1g34650 17.1 99.9 0.270 HDG10 (HOMEODOMAIN GLABROUS 10)
At1g29430 16.4 99.9 0.206 auxin-responsive family protein
At3g11350 16.2 99.9 0.093 -
At4g04510 15.8 99.9 0.134 protein kinase family protein
At1g72570 14.9 99.9 0.099 DNA binding / transcription factor

Metabolites

Inst. Type Regulated metabolite Std.R. P.R. D.F. D.R. KaPPA-View KEGG Formula Mass Measured mass
GC-MS unknown 21.6 99.6 5/5 1 - - - - 146
GC-MS unknown 20.4 99.6 5/5 2 - - - - 267 355
GC-MS unknown 17.7 99.5 5/5 1 - - - - 85 99 113
GC-MS unknown 16.5 99.4 5/5 1 - - - - 204 147 117
GC-MS unknown 14.5 99.2 5/5 1 - - - - 118 90 145 280 309
GC-MS unknown 14.3 99.2 5/5 2 - - - - 89 175 159
GC-MS unknown 13.6 99.1 4/5 1 - - - - 147 204 217 103
GC-MS unknown 12.1 99.0 5/5 1 - - - - 174
LC-MS unknown 21.6 99.4 1/5 1.5 - - - 540.1359 541.1437
LC-MS unknown 16.3 99.2 1/5 1.6 - - - 273.0617 274.0695
LC-MS unknown 15.4 99.2 2/5 1.3 - - - 524.1387 525.1465
LC-MS unknown 10.2 98.7 1/5 1.2 - - - 606.1820 607.1898
LC-MS unknown 5.4 97.5 5/5 1.5 - - - 591.1366 592.1444
CE-MS unknown 22.0 99.6 1/5 2.0 - - - 259 258
CE-MS unknown 20.3 99.5 3/5 1.5 - - - 102 103
CE-MS unknown 15.8 99.4 5/5 1.3 - - - 194 193
CE-MS unknown 13.9 99.3 4/5 1.4 - - - 251 252
CE-MS unknown 11.3 99.1 1/5 1.4 - - - 104 103
CE-MS unknown 11.1 99.0 4/5 1.8 - - - 132 131






Back to the RnR portal site

Back to the KAGIANA project homepage