RnR The prediction of regulatory relationships associated with At1g54160

QueryAt1g54160
DescriptionNF-YA5 (NUCLEAR FACTOR Y, SUBUNIT A5)
RAFL IDpda00580
C.R.C
R.O.X.L.10/10 lines
P.O.X. 100.0

Jump to MassBase to obtain the original metabolomics dataset of this over-expression experiment.

Click here to show genes regulating the gene of interest.

Click here to extract genes up-regulated and also co-expressed.

Maroonover-expressed gene
Orangegene
Yellowmetabolite, lipid mode, GC-MS
Cyanmetabolite, polar mode, GC-MS
Bluemetabolite, LC-MS
Greenmetabolite, negative mode, CE-MS
Limegreenmetabolite, positive mode, CE-MS



Candidate elements regulated by At1g54160

Genes

Regulated gene Std.R. P.R. Co-X Gene name/alias
At1g54160 201.1 100.0 1.000 NF-YA5 (NUCLEAR FACTOR Y, SUBUNIT A5)
At4g30170 102.9 100.0 0.135 peroxidase, putative
At2g01530 93.3 100.0 0.127 MLP329 (MLP-LIKE PROTEIN 329)
At4g21230 92.5 100.0 0.347 protein kinase family protein
At1g13100 90.1 100.0 0.338 CYP71B29
At1g14240 89.8 100.0 0.236 nucleoside phosphatase family protein / GDA1/CD39 family protein
At5g63600 89.4 100.0 0.123 FLS5 (FLAVONOL SYNTHASE 5)
At1g67330 82.4 100.0 0.152 F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;POB
At3g62280 77.4 100.0 0.250 carboxylesterase/ hydrolase, acting on ester bonds
At4g35150 76.9 100.0 0.238 O-methyltransferase family 2 protein
At5g40590 73.2 100.0 0.148 DC1 domain-containing protein
At2g22970 69.5 100.0 0.400 serine carboxypeptidase S10 family protein
At1g67400 68.9 100.0 0.382 -
At2g29750 61.0 100.0 0.140 UGT71C1 (UDP-GLUCOSYL TRANSFERASE 71C1)
At2g01900 60.4 100.0 0.229 endonuclease/exonuclease/phosphatase family protein
At3g62270 60.2 100.0 0.247 anion exchange family protein
At2g22920 59.1 100.0 0.313 serine carboxypeptidase S10 family protein
At3g20820 57.5 100.0 0.366 leucine-rich repeat family protein
At3g26450 56.6 100.0 0.330 major latex protein-related / MLP-related
At4g38340 54.3 100.0 0.336 RWP-RK domain-containing protein
At5g40510 52.2 100.0 0.209 -
At4g29140 43.8 100.0 0.305 MATE efflux protein-related
At1g61810 42.4 100.0 0.308 BGLU45 (BETA-GLUCOSIDASE 45)
At3g12610 42.4 100.0 0.292 DRT100 (DNA-DAMAGE REPAIR/TOLERATION 100)
At1g06620 40.5 100.0 0.204 2-oxoglutarate-dependent dioxygenase, putative
At4g12500 39.7 100.0 0.096 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein
At2g01520 38.7 100.0 0.181 MLP328 (MLP-LIKE PROTEIN 328)
At2g28960 37.2 100.0 0.189 leucine-rich repeat protein kinase, putative
At1g54070 36.8 100.0 0.018 dormancy/auxin associated protein-related
At2g39310 35.9 100.0 0.169 JAL22 (JACALIN-RELATED LECTIN 22)
At4g27860 35.1 100.0 0.226 integral membrane family protein
At5g38030 35.1 100.0 0.191 MATE efflux family protein
At3g15950 33.9 100.0 0.160 NAI2
At1g72200 33.7 100.0 0.162 zinc finger (C3HC4-type RING finger) family protein
At1g13110 33.6 100.0 0.328 CYP71B7
At2g34490 32.9 100.0 0.349 CYP710A2 (cytochrome P450, family 710, subfamily A, polypeptide 2)
At5g54350 32.8 100.0 0.302 -
At4g29270 32.1 100.0 0.191 acid phosphatase class B family protein
At1g78970 31.8 100.0 0.331 LUP1 (LUPEOL SYNTHASE 1)
At5g02540 30.9 100.0 0.303 short-chain dehydrogenase/reductase (SDR) family protein
At3g07990 30.8 100.0 0.402 SCPL27 (serine carboxypeptidase-like 27)
At1g11990 30.6 100.0 0.056 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P
At1g22500 30.3 100.0 0.191 zinc finger (C3HC4-type RING finger) family protein
At2g43390 29.0 100.0 0.229 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P
At2g23030 28.6 100.0 0.205 SNRK2.9 (SNF1-RELATED PROTEIN KINASE 2.9)
At4g12160 27.2 99.9 0.179 -
At3g50740 26.4 99.9 0.266 UGT72E1 (UDP-glucosyl transferase 72E1)
At5g40210 25.8 99.9 0.529 nodulin MtN21 family protein
At3g09260 25.6 99.9 0.195 PYK10
At2g45340 24.7 99.9 0.449 leucine-rich repeat transmembrane protein kinase, putative
At4g20780 24.7 99.9 0.255 calcium-binding protein, putative
At2g23620 24.0 99.9 0.213 MES1 (METHYL ESTERASE 1)
At3g47340 23.0 99.9 0.168 ASN1 (GLUTAMINE-DEPENDENT ASPARAGINE SYNTHASE 1)
At1g54740 22.6 99.9 0.219 -
At3g24503 21.4 99.9 0.361 ALDH2C4
At3g55290 21.1 99.9 0.299 short-chain dehydrogenase/reductase (SDR) family protein
At3g20370 20.9 99.9 0.158 meprin and TRAF homology domain-containing protein / MATH domain-containing protein
At1g24620 20.4 99.9 0.031 polcalcin, putative / calcium-binding pollen allergen, putative
At1g64405 20.4 99.9 0.193 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P
At3g16460 20.4 99.9 0.177 jacalin lectin family protein
At5g15130 20.2 99.9 0.196 WRKY72
At3g27650 20.0 99.9 0.306 LBD25 (LOB DOMAIN-CONTAINING PROTEIN 25)
At1g08090 19.7 99.9 0.075 ATNRT2:1 (NITRATE TRANSPORTER 2:1)
At2g28690 19.6 99.9 0.224 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO
At3g55130 19.6 99.9 0.402 ATWBC19 (White-Brown Complex homolog 19)
At1g29280 19.5 99.9 0.211 WRKY65
At4g37340 19.4 99.9 0.284 CYP81D3
At1g12240 19.2 99.9 0.338 ATBETAFRUCT4
At1g48500 18.8 99.9 0.330 JAZ4 (JASMONATE-ZIM-DOMAIN PROTEIN 4)
At3g16450 18.8 99.9 0.162 jacalin lectin family protein
At1g77990 18.7 99.9 0.418 AST56
At5g36840 18.2 99.9 0.182 transposable element gene
At3g47620 17.9 99.9 0.421 AtTCP14 (TEOSINTE BRANCHED1, CYCLOIDEA and PCF (TCP) 14)
At1g56010 17.8 99.9 0.320 NAC1
At2g10490 17.8 99.9 0.284 transposable element gene
At4g28890 17.8 99.9 0.172 protein binding / ubiquitin-protein ligase/ zinc ion binding
At5g54150 17.8 99.9 0.351 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P
At4g32950 17.5 99.9 0.335 protein phosphatase 2C, putative / PP2C, putative
At1g24010 17.3 99.9 0.167 -
At1g54730 17.2 99.9 0.476 sugar transporter, putative
At1g47480 16.9 99.9 0.194 hydrolase
At5g27930 16.9 99.9 0.516 protein phosphatase 2C, putative / PP2C, putative
At3g06220 16.7 99.9 0.252 DNA binding / transcription factor
At5g22890 16.6 99.9 0.183 zinc finger (C2H2 type) family protein
At3g26290 16.5 99.9 0.504 CYP71B26
At1g50560 16.2 99.9 0.215 CYP705A25
At3g63210 16.0 99.9 0.426 MARD1
At3g16390 15.9 99.9 0.236 NSP3 (NITRILE SPECIFIER PROTEIN 3)
At2g05370 15.8 99.9 0.381 -
At2g36890 15.8 99.9 0.329 RAX2 (REGULATOR OF AXILLARY MERISTEMS 2)
At4g30060 15.6 99.9 0.291 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POB
At4g16670 15.3 99.9 0.352 phosphoinositide binding
At3g31940 15.2 99.9 0.170 transposable element gene
At1g67710 15.1 99.9 0.324 ARR11 (RESPONSE REGULATOR 11)
At5g48430 15.1 99.9 0.100 aspartic-type endopeptidase
At1g24540 15.0 99.9 0.120 CYP86C1
At5g02580 15.0 99.9 0.203 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO
At1g16370 14.9 99.9 0.209 OCT6 (ORGANIC CATION/CARNITINE TRANSPORTER 6)
At5g30450 14.9 99.9 0.193 transposable element gene
At1g20490 14.7 99.9 0.393 AMP-dependent synthetase and ligase family protein
At2g44195 14.7 99.9 0.209 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFPO

Metabolites

Inst. Type Regulated metabolite Std.R. P.R. D.F. D.R. KaPPA-View KEGG Formula Mass Measured mass
GC-MS unknown 144.5 100.0 1/5 1 - - - - 149 167
GC-MS unknown 36.1 99.8 2/5 1 - - - - 85 99 113
GC-MS unknown 35.5 99.8 2/5 1 - - - - 82 102 89
GC-MS unknown 32.1 99.8 5/5 2 - - - - 145 88
GC-MS unknown 24.5 99.7 5/5 2 - - - - 85 99 113
GC-MS unknown 23.4 99.7 2/5 2 - - - - 83 97 113
GC-MS Glucose 6-phosphate 23.1 99.7 5/5 2 KPC00338 C00092 C6H13O9P 260.02972 129 147 299 387
GC-MS unknown 19.6 99.6 5/5 2 - - - - 87 119 97 111
GC-MS unknown 18.8 99.5 4/5 1 - - - - 85 99 113
GC-MS unknown 17.3 99.4 2/5 2 - - - - 174 86 100
GC-MS unknown 15.2 99.3 4/5 1 - - - - 149 164 135 305 290
GC-MS unknown 15.2 99.3 5/5 1 - - - - 147 119
GC-MS unknown 12.6 99.0 5/5 1 - - - - 159
GC-MS unknown 12.2 99.0 5/5 1 - - - - 303 231
GC-MS unknown 12.2 99.0 4/5 2 - - - - 146 130
GC-MS unknown 12.0 99.0 3/5 1 - - - - 85 99 113
LC-MS unknown 20.8 99.4 1/5 1.4 - - - 782.2555 783.2633
LC-MS unknown 11.1 98.9 1/5 1.4 - - - 794.2367 795.2445
LC-MS unknown 8.5 98.5 1/5 1.1 - - - 206.0547 207.0625
LC-MS unknown 8.5 98.5 1/5 1.7 - - - 572.1899 573.1977
LC-MS unknown 7.8 98.3 2/5 1.3 - - - 524.1387 525.1465
CE-MS unknown 45.9 99.9 5/5 1.6 - - - 130 129
CE-MS unknown 33.8 99.8 5/5 1.8 - - - 174 173
CE-MS unknown 28.7 99.7 5/5 1.4 - - - 322 321
CE-MS unknown 18.7 99.5 5/5 1.8 - - - 119 118
CE-MS unknown 18.1 99.5 5/5 1.5 - - - 75 74
CE-MS unknown 17.7 99.5 2/5 1.3 - - - 88 87
CE-MS unknown 17.3 99.4 5/5 1.4 - - - 167 166
CE-MS unknown 16.6 99.4 5/5 1.5 - - - 148 147
CE-MS unknown 16.2 99.4 5/5 1.2 - - - 323 322
CE-MS unknown 16.2 99.4 5/5 1.3 - - - 324 323
CE-MS unknown 15.5 99.4 5/5 1.6 - - - 224 223
CE-MS unknown 14.0 99.3 5/5 1.2 - - - 164 163
CE-MS unknown 13.0 99.2 5/5 1.6 - - - 76 75
CE-MS unknown 13.0 99.2 5/5 1.8 - - - 132 131
CE-MS unknown 12.7 99.2 5/5 1.5 - - - 125 126
CE-MS unknown 11.3 99.1 5/5 1.5 - - - 146 145
CE-MS unknown 10.8 99.0 5/5 1.2 - - - 214 215
CE-MS unknown 10.7 99.0 5/5 1.5 - - - 310 309






Back to the RnR portal site

Back to the KAGIANA project homepage