RnR The prediction of regulatory relationships associated with At1g35460

QueryAt1g35460
Descriptionbasic helix-loop-helix (bHLH) family protein
RAFL IDpda02680
C.R.C
R.O.X.L.10/10 lines
P.O.X. 100.0

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Maroonover-expressed gene
Orangegene
Yellowmetabolite, lipid mode, GC-MS
Cyanmetabolite, polar mode, GC-MS
Bluemetabolite, LC-MS
Greenmetabolite, negative mode, CE-MS
Limegreenmetabolite, positive mode, CE-MS



Candidate elements regulated by At1g35460

Genes

Regulated gene Std.R. P.R. Co-X Gene name/alias
At1g47840 124.0 100.0 0.420 HXK3 (HEXOKINASE 3)
At1g35460 107.1 100.0 1.000 basic helix-loop-helix (bHLH) family protein
At2g22170 102.1 100.0 0.510 lipid-associated family protein
At3g27170 96.0 100.0 0.469 CLC-B (CHLORIDE CHANNEL B)
At1g48510 85.8 100.0 0.311 cytochrome c oxidase assembly protein surfeit-related
At4g22212 78.8 100.0 0.272 -
At3g21080 59.4 100.0 0.205 ABC transporter-related
At4g18250 59.2 100.0 0.385 receptor serine/threonine kinase, putative
At3g13760 59.1 100.0 0.258 DC1 domain-containing protein
At1g02900 53.9 100.0 0.314 RALF1 (RAPID ALKALINIZATION FACTOR 1)
At3g21720 52.2 100.0 0.221 ICL (ISOCITRATE LYASE)
At2g28960 49.1 100.0 0.311 leucine-rich repeat protein kinase, putative
At5g07150 48.9 100.0 0.487 leucine-rich repeat family protein
At1g48500 47.7 100.0 0.369 JAZ4 (JASMONATE-ZIM-DOMAIN PROTEIN 4)
At4g11460 42.2 100.0 0.452 protein kinase family protein
At3g59120 41.8 100.0 0.465 DC1 domain-containing protein
At2g02680 39.5 100.0 0.320 DC1 domain-containing protein
At1g09440 37.8 100.0 0.571 protein kinase family protein
At1g76650 37.5 100.0 0.298 calcium-binding EF hand family protein
At1g73270 37.4 100.0 0.293 scpl6 (serine carboxypeptidase-like 6)
At2g28700 37.2 100.0 0.312 AGL46 (AGAMOUS-LIKE 46)
At1g48640 35.2 100.0 0.534 lysine and histidine specific transporter, putative
At4g21870 34.6 100.0 0.515 26.5 kDa class P-related heat shock protein (HSP26.5-P)
At1g10550 33.8 100.0 0.303 XTH33
At5g52120 33.3 100.0 0.636 AtPP2-A14 (Phloem protein 2-A14)
At1g77520 32.8 100.0 0.339 O-methyltransferase family 2 protein
At1g59930 28.9 100.0 0.252 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P
At1g73280 28.3 100.0 0.440 scpl3 (serine carboxypeptidase-like 3)
At3g06070 27.6 100.0 0.548 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PM
At3g12090 27.5 100.0 0.436 TET6 (TETRASPANIN6)
At5g26280 26.2 99.9 0.383 meprin and TRAF homology domain-containing protein / MATH domain-containing protein
At1g66940 25.9 99.9 0.746 protein kinase-related
At4g21600 25.6 99.9 0.416 ENDO5 (endonuclease 5)
At2g45650 25.3 99.9 0.274 AGL6 (AGAMOUS-LIKE 6)
At2g41230 24.2 99.9 0.320 F:unknown;P:biological_process unknown;C:unknown;PM
At1g61740 23.7 99.9 0.744 F:unknown;P:unknown;C:endomembrane system, integral to membrane;BOPA
At4g13290 23.7 99.9 0.217 CYP71A19
At1g08100 23.5 99.9 0.267 NRT2.2 (NITRATE TRANSPORTER 2.2)
At3g21770 22.6 99.9 0.377 peroxidase 30 (PER30) (P30) (PRXR9)
At2g28760 22.5 99.9 0.523 NAD-dependent epimerase/dehydratase family protein
At4g22050 21.8 99.9 0.130 aspartyl protease family protein
At4g30140 21.5 99.9 0.195 GDSL-motif lipase/hydrolase family protein
At2g19590 21.0 99.9 0.329 ACO1 (ACC OXIDASE 1)
At5g12900 20.3 99.9 0.788 F:molecular_function unknown;P:biological_process unknown;C:chloroplast;PMOBF
At1g48690 20.1 99.9 0.335 auxin-responsive GH3 family protein
At3g49860 19.5 99.9 0.342 ATARLA1B (ADP-ribosylation factor-like A1B)
At2g29750 19.0 99.9 0.255 UGT71C1 (UDP-GLUCOSYL TRANSFERASE 71C1)
At5g53820 18.3 99.9 0.095 F:molecular_function unknown;P:biological_process unknown;C:unknown;P
At1g67030 18.2 99.9 0.362 ZFP6 (ZINC FINGER PROTEIN 6)
At1g33170 17.9 99.9 0.677 dehydration-responsive family protein
At1g10400 17.7 99.9 0.337 UDP-glycosyltransferase/ transferase, transferring glycosyl groups
At1g54730 17.7 99.9 0.835 sugar transporter, putative
At3g23880 16.8 99.9 0.608 F-box family protein
At1g48750 16.6 99.9 0.483 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein
At3g02480 16.6 99.9 0.232 ABA-responsive protein-related
At5g65790 16.5 99.9 0.383 MYB68 (MYB DOMAIN PROTEIN 68)
At2g45190 15.9 99.9 0.593 AFO (ABNORMAL FLORAL ORGANS)
At3g09220 15.8 99.9 0.354 LAC7 (laccase 7)
At3g27950 15.4 99.9 0.268 early nodule-specific protein, putative
At1g02640 15.2 99.9 0.382 BXL2 (BETA-XYLOSIDASE 2)
At1g15210 14.7 99.9 0.355 PDR7 (PLEIOTROPIC DRUG RESISTANCE 7)
At4g15270 14.6 99.9 0.516 glucosyltransferase-related

Metabolites

Inst. Type Regulated metabolite Std.R. P.R. D.F. D.R. KaPPA-View KEGG Formula Mass Measured mass
GC-MS unknown 119.7 100.0 5/5 1 - - - - 147 103 129 217 324 361
GC-MS unknown 67.1 99.9 5/5 2 - - - - 130 324 245 280 147
GC-MS unknown 46.8 99.9 4/5 1 - - - - 149 104
GC-MS unknown 36.7 99.9 4/5 2 - - - - 149 167
GC-MS unknown 36.7 99.9 5/5 1 - - - - 204 147 129 103
GC-MS unknown 34.2 99.8 5/5 1 - - - - 95 109 149 164
GC-MS Adenosine 25.1 99.7 5/5 1 KPC00281 C00212 C10H13N5O4 267.0967539 236 230 245 192
GC-MS unknown 25.0 99.7 5/5 1 - - - -
GC-MS unknown 22.5 99.7 5/5 1 - - - - 149 104 223
GC-MS unknown 21.7 99.6 5/5 2 - - - - 105 135 165
GC-MS unknown 19.7 99.6 5/5 2 - - - - 117 129 145
GC-MS unknown 18.9 99.5 5/5 1 - - - - 117 129 145 313
GC-MS Brassicasterol 14.6 99.2 5/5 2 KPC01438 C08813 C28H46O 398.3548661 129
GC-MS unknown 14.6 99.2 5/5 1 - - - - 205 147 117 273
GC-MS L-Alanine 13.7 99.2 5/5 1 KPC00666 C00041 C3H7NO2 89.04767848 100 188 147 133 114
GC-MS unknown 13.3 99.1 5/5 1 - - - - 106 238
GC-MS unknown 13.1 99.1 5/5 2 - - - -
LC-MS unknown 116.1 99.8 2/7 1.5 - - - 916.3210 917.3288
LC-MS unknown 113.7 99.8 2/7 1.7 - - - 963.3455 964.3533
LC-MS unknown 68.4 99.8 3/7 1.3 - - - 1320.5038 1321.5116
LC-MS unknown 62.0 99.8 1/7 1.3 - - - 882.3840 883.3918
LC-MS unknown 56.0 99.7 3/7 1.4 - - - 847.2715 848.2793
LC-MS unknown 55.8 99.7 1/7 1.0 - - - 720.3262 721.3340
LC-MS unknown 49.6 99.7 4/7 1.5 - - - 799.2813 800.2891
LC-MS unknown 46.2 99.7 3/7 1.4 - - - 625.2317 626.2395
LC-MS unknown 43.2 99.7 3/7 1.5 - - - 636.1964 637.2042
LC-MS unknown 38.9 99.6 2/7 1.3 - - - 853.3019 854.3097
LC-MS unknown 38.0 99.6 2/7 1.4 - - - 447.1558 448.1636
LC-MS unknown 36.9 99.6 1/7 1.3 - - - 625.2285 626.2363
LC-MS unknown 36.9 99.6 1/7 1.2 - - - 1143.4272 1144.4350
LC-MS unknown 34.9 99.6 5/7 1.4 - - - 541.1933 542.2011
LC-MS unknown 34.2 99.6 1/7 1.1 - - - 663.2356 664.2434
LC-MS unknown 33.3 99.6 4/7 1.3 - - - 571.1697 572.1775
LC-MS unknown 30.2 99.6 3/7 1.3 - - - 1129.3452 1130.3530
LC-MS unknown 27.9 99.5 1/7 1.1 - - - 234.0945 235.1023
LC-MS unknown 26.8 99.5 7/7 1.3 - - - 1319.9951 1321.0029
LC-MS unknown 25.7 99.5 4/7 1.8 - - - 532.1733 533.1811
LC-MS unknown 24.3 99.5 3/7 1.7 - - - 1060.4053 1061.4131
LC-MS unknown 23.2 99.5 4/7 1.3 - - - 643.2378 644.2456
LC-MS unknown 22.5 99.4 3/7 1.7 - - - 1066.4257 1067.4335
LC-MS unknown 21.1 99.4 3/7 1.3 - - - 354.1203 355.1281
LC-MS unknown 20.9 99.4 4/7 1.3 - - - 910.2365 911.2443
LC-MS unknown 20.3 99.4 1/7 1.1 - - - 218.0964 219.1042
LC-MS unknown 19.8 99.4 4/7 1.8 - - - 1059.4017 1060.4095
LC-MS unknown 19.5 99.4 3/7 1.9 - - - 703.2391 704.2469
LC-MS unknown 19.2 99.3 3/7 1.2 - - - 607.2255 608.2333
LC-MS unknown 19.0 99.3 6/7 1.7 - - - 800.2883 801.2961
LC-MS unknown 18.6 99.3 3/7 1.2 - - - 880.3123 881.3201
LC-MS unknown 16.6 99.3 1/7 1.5 - - - 1001.3286 1002.3364
LC-MS unknown 16.5 99.2 1/7 1.0 - - - 892.3209 893.3287
LC-MS unknown 16.4 99.2 5/7 1.7 - - - 588.2192 589.2270
LC-MS unknown 15.6 99.2 4/7 1.2 - - - 274.1078 275.1156
LC-MS unknown 15.0 99.2 1/7 1.0 - - - 418.1151 419.1229
LC-MS unknown 15.0 99.2 5/7 1.6 - - - 657.2198 658.2276
LC-MS unknown 14.9 99.2 7/7 1.6 - - - 280.0816 281.0894
LC-MS unknown 14.9 99.2 6/7 1.3 - - - 361.1080 362.1158
LC-MS unknown 14.0 99.1 2/7 1.5 - - - 562.2353 563.2431
LC-MS unknown 13.8 99.1 3/7 1.3 - - - 823.3259 824.3337
LC-MS unknown 13.2 99.0 5/7 1.4 - - - 578.2006 579.2084
LC-MS unknown 12.9 99.0 4/7 1.5 - - - 540.1359 541.1437
LC-MS unknown 12.6 99.0 3/7 1.2 - - - 372.1271 373.1349
LC-MS unknown 12.3 99.0 2/7 1.2 - - - 311.1197 312.1275
LC-MS unknown 12.3 99.0 2/7 1.4 - - - 520.2025 521.2103
LC-MS unknown 12.1 99.0 2/7 1.3 - - - 447.1510 448.1588
LC-MS unknown 12.1 99.0 1/7 1.3 - - - 546.2180 547.2258
CE-MS unknown 62.3 99.9 5/5 1.3 - - - 88 87
CE-MS unknown 12.6 99.2 5/5 1.5 - - - 379 378
CE-MS unknown 12.0 99.1 4/5 1.3 - - - 129 130
CE-MS unknown 11.5 99.1 5/5 1.5 - - - 379 378
CE-MS unknown 11.0 99.0 5/5 1.8 - - - 119 118






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