RnR The prediction of regulatory relationships associated with At1g24260

QueryAt1g24260
DescriptionSEP3 (SEPALLATA3)
RAFL IDpda11725
C.R.C
R.O.X.L.10/10 lines
P.O.X. 100.0

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Click here to extract genes up-regulated and also co-expressed.

Maroonover-expressed gene
Orangegene
Yellowmetabolite, lipid mode, GC-MS
Cyanmetabolite, polar mode, GC-MS
Bluemetabolite, LC-MS
Greenmetabolite, negative mode, CE-MS
Limegreenmetabolite, positive mode, CE-MS



Candidate elements regulated by At1g24260

Genes

Regulated gene Std.R. P.R. Co-X Gene name/alias
At1g24260 157.8 100.0 1.000 SEP3 (SEPALLATA3)
At4g15710 124.1 100.0 0.150 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P
At1g24010 51.2 100.0 0.260 -
At4g38690 39.5 100.0 0.195 1-phosphatidylinositol phosphodiesterase-related
At1g24000 39.1 100.0 0.154 Bet v I allergen family protein
At2g19300 38.6 100.0 0.113 F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P
At1g02900 37.6 100.0 0.084 RALF1 (RAPID ALKALINIZATION FACTOR 1)
At3g30450 33.9 100.0 0.099 transposable element gene
At1g08090 33.8 100.0 0.017 ATNRT2:1 (NITRATE TRANSPORTER 2:1)
At1g48690 33.1 100.0 0.094 auxin-responsive GH3 family protein
At2g44480 33.0 100.0 0.101 BGLU17 (BETA GLUCOSIDASE 17)
At3g42090 32.7 100.0 0.048 transposable element gene
At3g59480 32.5 100.0 0.229 pfkB-type carbohydrate kinase family protein
At1g62070 32.3 100.0 0.093 F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PBF
At3g50980 30.3 100.0 0.036 XERO1 (DEHYDRIN XERO 1)
At4g05200 29.6 100.0 0.083 protein kinase family protein
At3g63210 28.1 100.0 0.234 MARD1
At1g70840 27.8 100.0 0.041 MLP31 (MLP-LIKE PROTEIN 31)
At3g47270 27.7 100.0 0.077 transposable element gene
At3g12090 26.7 99.9 0.097 TET6 (TETRASPANIN6)
At2g44380 26.6 99.9 0.069 DC1 domain-containing protein
At3g61970 25.4 99.9 0.334 NGA2 (NGATHA2)
At1g35900 24.9 99.9 0.136 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P
At1g53420 24.4 99.9 0.092 serine/threonine protein kinase-related
At2g22990 24.3 99.9 0.174 SNG1 (SINAPOYLGLUCOSE 1)
At1g04330 23.3 99.9 0.097 F:molecular_function unknown;P:biological_process unknown;C:chloroplast;P
At3g47950 23.0 99.9 0.264 AHA4
At5g34895 23.0 99.9 0.082 transposable element gene
At3g32960 22.8 99.9 0.164 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P
At2g14020 22.4 99.9 0.161 transposable element gene
At2g43580 22.3 99.9 0.069 chitinase, putative
At2g02200 21.6 99.9 0.084 transposable element gene
At2g33830 21.2 99.9 0.141 dormancy/auxin associated family protein
At1g42697 21.1 99.9 0.171 transposable element gene
At1g02640 21.0 99.9 0.151 BXL2 (BETA-XYLOSIDASE 2)
At2g45000 20.0 99.9 0.120 EMB2766 (EMBRYO DEFECTIVE 2766)
At1g78460 19.8 99.9 0.113 SOUL heme-binding family protein
At1g72290 19.4 99.9 0.527 trypsin and protease inhibitor family protein / Kunitz family protein
At5g28010 19.1 99.9 0.212 Bet v I allergen family protein
At2g23560 18.6 99.9 0.244 MES7 (METHYL ESTERASE 7)
At1g21100 18.3 99.9 0.087 O-methyltransferase, putative
At3g09910 18.2 99.9 0.352 ATRABC2B (ARABIDOPSIS RAB GTPASE HOMOLOG C2B)
At1g51500 17.6 99.9 0.260 CER5 (ECERIFERUM 5)
At1g74540 17.1 99.9 0.540 CYP98A8
At2g10010 16.8 99.9 0.102 transposable element gene
At3g47750 16.8 99.9 0.161 ABCA4 (ATP BINDING CASSETTE SUBFAMILY A4)
At3g50720 16.6 99.9 0.093 protein kinase, putative
At3g06230 16.3 99.9 0.009 ATMKK8
At1g23800 16.2 99.9 0.340 ALDH2B7
At5g56100 16.1 99.9 0.132 glycine-rich protein / oleosin
At5g61710 16.0 99.9 0.037 F:molecular_function unknown;P:biological_process unknown;C:unknown;P
At5g36720 15.8 99.9 0.067 F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P
At1g13610 15.7 99.9 0.183 -
At2g44360 15.7 99.9 0.255 F:molecular_function unknown;P:biological_process unknown;C:unknown;P
At1g31270 15.5 99.9 0.137 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown
At2g18350 15.5 99.9 0.227 AtHB24 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 24)
At5g66985 15.3 99.9 0.061 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P
At3g58350 15.2 99.9 0.037 meprin and TRAF homology domain-containing protein / MATH domain-containing protein
At3g45280 15.1 99.9 0.087 SYP72 (SYNTAXIN OF PLANTS 72)
At5g46000 14.8 99.9 0.102 jacalin lectin family protein
At1g78450 14.7 99.9 0.098 SOUL heme-binding family protein
At1g78990 14.7 99.9 0.052 transferase family protein
At4g24170 14.6 99.9 0.095 kinesin motor family protein

Metabolites

Inst. Type Regulated metabolite Std.R. P.R. D.F. D.R. KaPPA-View KEGG Formula Mass Measured mass
GC-MS unknown 25.3 99.7 3/4 1 - - - - 140 103
GC-MS unknown 12.7 99.0 4/4 2 - - - - 173
GC-MS unknown 12.0 99.0 2/4 2 - - - - 86 101 144
GC-MS unknown 11.9 98.9 3/4 2 - - - - 104 91 115
GC-MS unknown 11.4 98.9 4/4 2 - - - - 173
LC-MS unknown 21.2 99.4 1/8 1.3 - - - 544.1818 545.1896
LC-MS unknown 13.5 99.1 3/8 1.4 - - - 542.1363 543.1441
LC-MS unknown 11.6 98.9 1/8 1.6 - - - 225.0664 226.0742
LC-MS unknown 10.7 98.8 1/8 1.8 - - - 334.1067 335.1145
LC-MS unknown 10.0 98.7 1/8 1.7 - - - 338.0621 339.0699
CE-MS unknown 48.3 99.9 1/10 1.5 - - - 347 348
CE-MS unknown 21.8 99.6 1/10 1.3 - - - 246 245
CE-MS unknown 8.0 98.6 5/10 1.4 - - - 226 227
CE-MS unknown 7.6 98.5 1/10 1.5 - - - 146 145
CE-MS unknown 7.2 98.4 5/10 1.3 - - - 88 87






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