RnR The prediction of regulatory relationships associated with At1g22640

QueryAt1g22640
DescriptionMYB3 (MYB DOMAIN PROTEIN 3)
RAFL IDpda03176
C.R.C
R.O.X.L.10/10 lines
P.O.X. 100.0

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Click here to show genes regulating the gene of interest.

Click here to extract genes up-regulated and also co-expressed.

Maroonover-expressed gene
Orangegene
Yellowmetabolite, lipid mode, GC-MS
Cyanmetabolite, polar mode, GC-MS
Bluemetabolite, LC-MS
Greenmetabolite, negative mode, CE-MS
Limegreenmetabolite, positive mode, CE-MS



Candidate elements regulated by At1g22640

Genes

Regulated gene Std.R. P.R. Co-X Gene name/alias
At1g22640 174.5 100.0 1.000 MYB3 (MYB DOMAIN PROTEIN 3)
At1g13400 63.6 100.0 0.379 NUB (NUBBIN)
At5g39820 55.9 100.0 0.106 anac094 (Arabidopsis NAC domain containing protein 94)
At5g56860 41.0 100.0 0.521 GNC (GATA, nitrate-inducible, carbon metabolism-involved)
At1g16950 35.6 100.0 0.177 F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P
At3g48580 26.2 99.9 0.257 xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative
At5g45570 24.1 99.9 0.144 Ulp1 protease family protein
At3g27980 23.4 99.9 0.037 pectinesterase family protein
At3g16360 22.9 99.9 0.349 AHP4 (HPT PHOSPHOTRANSMITTER 4)
At5g02140 22.7 99.9 0.067 thaumatin-like protein, putative
At1g53070 22.3 99.9 0.446 legume lectin family protein
At5g17180 21.7 99.9 0.137 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P
At1g11610 19.7 99.9 0.218 CYP71A18
At5g03390 19.4 99.9 0.345 F:molecular_function unknown;P:biological_process unknown;C:chloroplast;P
At2g11690 18.9 99.9 0.086 transposable element gene
At3g24540 17.9 99.9 0.257 protein kinase family protein
At5g28880 17.3 99.9 0.147 transposable element gene
At4g17470 17.2 99.9 0.372 palmitoyl protein thioesterase family protein
At1g24575 16.8 99.9 0.478 F:molecular_function unknown;P:biological_process unknown;C:unknown;P
At3g55100 15.7 99.9 0.413 ABC transporter family protein
At5g42600 15.3 99.9 0.209 MRN1 (MARNERAL SYNTHASE)
At3g47230 15.1 99.9 0.239 transposable element gene
At1g27620 14.8 99.9 0.446 transferase family protein
At4g07720 14.8 99.9 0.324 -
At1g74500 14.7 99.9 0.289 bHLH family protein

Metabolites

Inst. Type Regulated metabolite Std.R. P.R. D.F. D.R. KaPPA-View KEGG Formula Mass Measured mass
GC-MS unknown 151.6 100.0 5/5 2 - - - - 197 155 212 153 141
GC-MS unknown 79.9 100.0 5/5 2 - - - -
GC-MS unknown 33.4 99.8 5/5 1 - - - - 147 221 281 355
GC-MS L-Asparagine 31.9 99.8 5/5 1 KPC00674 C00152 C4H8N2O3 132.0534921 100 84 115 128 243
GC-MS unknown 29.9 99.8 5/5 1 - - - - 156 117
GC-MS unknown 27.4 99.8 5/5 1 - - - - 87 143
GC-MS 4-Aminobutyric acid 23.9 99.7 5/5 1 KPC00193 C00334 C4H9NO2 103.0633285 174 147 86 100
GC-MS unknown 23.5 99.7 5/5 1 - - - -
GC-MS unknown 21.1 99.6 5/5 1 - - - - 83 87 97 110
GC-MS unknown 20.2 99.6 5/5 2 - - - -
GC-MS unknown 18.7 99.5 5/5 2 - - - -
GC-MS unknown 16.7 99.4 5/5 2 - - - - 141 105 91 195
GC-MS unknown 16.0 99.4 5/5 2 - - - - 204 147 217 361
GC-MS unknown 14.9 99.3 5/5 1 - - - - 117 129 132 145 341
GC-MS unknown 14.8 99.3 5/5 2 - - - - 83 82 161 192
GC-MS Fumaric acid 14.7 99.3 5/5 1 KPC00532 C00122 C4H4O4 116.0109586 245 147 83
GC-MS unknown 14.6 99.2 5/5 2 - - - - 130 324 245 280 147
GC-MS unknown 14.4 99.2 5/5 2 - - - -
GC-MS unknown 13.6 99.1 5/5 1 - - - -
GC-MS unknown 13.5 99.1 5/5 1 - - - - 141 113
GC-MS Stearic acid 12.2 99.0 5/5 1 KPC01359 C01530 C18H36O2 284.2715304 87 143 101
LC-MS unknown 20.0 99.4 2/5 1.3 - - - 670.3464 671.3542
LC-MS unknown 14.7 99.1 1/5 1.0 - - - 418.1151 419.1229
LC-MS unknown 8.8 98.5 2/5 1.6 - - - 359.1225 360.1303
LC-MS unknown 6.9 98.1 5/5 1.6 - - - 354.0763 355.0841
LC-MS unknown 5.7 97.6 2/5 1.5 - - - 649.1836 650.1914
CE-MS unknown 63.8 99.9 1/5 1.3 - - - 201 202
CE-MS unknown 38.9 99.9 2/5 2.3 - - - 244 245
CE-MS unknown 27.7 99.7 2/5 2.1 - - - 244 243
CE-MS unknown 23.2 99.6 4/5 1.9 - - - 243 244
CE-MS unknown 20.6 99.6 5/5 1.9 - - - 243 242
CE-MS unknown 19.7 99.5 1/5 1.5 - - - 324 323
CE-MS unknown 19.5 99.5 5/5 1.3 - - - 243 244
CE-MS unknown 14.9 99.3 4/5 1.3 - - - 101 102
CE-MS unknown 14.7 99.3 3/5 1.4 - - - 118 117
CE-MS unknown 12.5 99.2 3/5 1.4 - - - 117 116
CE-MS unknown 11.9 99.1 5/5 1.6 - - - 252 251
CE-MS unknown 10.9 99.0 5/5 1.2 - - - 146 145






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