RnR The prediction of regulatory relationships associated with At1g04250

QueryAt1g04250
DescriptionAXR3 (AUXIN RESISTANT 3)
RAFL IDpda03374
C.R.C
R.O.X.L.10/10 lines
P.O.X. 34.8

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Candidate elements regulated by At1g04250

Genes

Regulated gene Std.R. P.R. Co-X Gene name/alias
At3g13610 67.4 100.0 0.519 oxidoreductase, 2OG-Fe(II) oxygenase family protein
At4g15120 35.6 100.0 0.531 VQ motif-containing protein
At3g51330 31.1 100.0 0.521 aspartyl protease family protein
At5g44480 26.6 99.9 0.539 DUR (DEFECTIVE UGE IN ROOT)
At1g02360 26.1 99.9 0.509 chitinase, putative
At3g13790 22.6 99.9 0.627 ATBFRUCT1
At2g40610 20.2 99.9 0.566 ATEXPA8 (ARABIDOPSIS THALIANA EXPANSIN A8)
At4g30060 18.0 99.9 0.595 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POB
At3g26690 16.9 99.9 0.566 ATNUDX13 (ARABIDOPSIS THALIANA NUDIX HYDROLASE HOMOLOG 13)
At4g03550 16.8 99.9 0.574 ATGSL05 (GLUCAN SYNTHASE-LIKE 5)
At4g37010 16.8 99.9 0.580 caltractin, putative / centrin, putative
At4g22070 16.5 99.9 0.543 WRKY31
At4g03510 14.6 99.9 0.558 RMA1
At4g29140 14.5 99.8 0.533 MATE efflux protein-related
At4g14465 14.1 99.8 0.655 DNA-binding protein-related
At5g01490 14.1 99.8 0.583 CAX4 (CATION EXCHANGER 4)
At3g26470 13.8 99.8 0.565 -
At2g46030 13.6 99.8 0.639 UBC6 (ubiquitin-conjugating enzyme 6)
At4g37520 13.3 99.8 0.515 peroxidase 50 (PER50) (P50) (PRXR2)
At1g05010 13.0 99.8 0.502 EFE (ETHYLENE-FORMING ENZYME)
At1g11000 12.7 99.8 0.551 MLO4 (MILDEW RESISTANCE LOCUS O 4)
At2g26290 12.2 99.8 0.553 ARSK1 (root-specific kinase 1)
At3g53480 12.2 99.8 0.606 PDR9 (PLEIOTROPIC DRUG RESISTANCE 9)
At4g01940 12.1 99.8 0.513 NFU1
At3g29035 11.9 99.8 0.674 ATNAC3 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 3)
At4g03520 11.8 99.8 0.510 ATHM2
At1g31410 11.5 99.8 0.517 putrescine-binding periplasmic protein-related
At4g00700 11.0 99.7 0.529 C2 domain-containing protein
At1g68450 10.9 99.7 0.594 VQ motif-containing protein
At5g48900 10.7 99.7 0.704 pectate lyase family protein
At3g06420 10.4 99.7 0.595 ATG8H (autophagy 8h)
At4g03430 10.3 99.7 0.505 EMB2770 (EMBRYO DEFECTIVE 2770)
At4g23010 10.1 99.7 0.538 UDP-galactose transporter-related
At1g30890 10.0 99.7 0.728 integral membrane HRF1 family protein
At2g21045 9.8 99.7 0.533 -
At5g47050 9.7 99.7 0.654 protein binding / zinc ion binding
At1g78340 9.5 99.7 0.542 ATGSTU22 (GLUTATHIONE S-TRANSFERASE TAU 22)
At5g58940 9.4 99.7 0.519 CRCK1 (CALMODULIN-BINDING RECEPTOR-LIKE CYTOPLASMIC KINASE 1)
At2g27360 9.3 99.7 0.762 lipase, putative
At5g60950 9.1 99.6 0.555 COBL5 (COBRA-LIKE PROTEIN 5 PRECURSOR)
At4g03560 9.0 99.6 0.722 ATTPC1 (TWO-PORE CHANNEL 1)
At2g46225 8.9 99.6 0.668 ABIL1 (Abi-1-like 1)
At5g04980 8.8 99.6 0.601 endonuclease/exonuclease/phosphatase family protein
At4g20110 8.6 99.6 0.641 vacuolar sorting receptor, putative
At4g11290 8.4 99.6 0.567 peroxidase, putative
At2g36380 8.0 99.5 0.721 PDR6
At3g22600 8.0 99.5 0.592 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein
At4g26120 8.0 99.5 0.511 ankyrin repeat family protein / BTB/POZ domain-containing protein
At2g44790 7.8 99.5 0.720 UCC2 (UCLACYANIN 2)
At2g46090 7.8 99.5 0.504 diacylglycerol kinase family protein
At1g34420 7.6 99.5 0.508 leucine-rich repeat family protein / protein kinase family protein
At1g28680 7.2 99.4 0.704 transferase family protein
At2g43080 7.2 99.4 0.664 AT-P4H-1 (A. THALIANA P4H ISOFORM 1)
At5g25460 7.2 99.4 0.665 F:molecular_function unknown;P:biological_process unknown;C:plant-type cell wall;PB
At3g02170 7.1 99.4 0.565 LNG2 (LONGIFOLIA2)
At2g43540 7.0 99.4 0.535 F:molecular_function unknown;P:N-terminal protein myristoylation;C:cellular_component unknown;P
At5g20050 7.0 99.4 0.603 protein kinase family protein
At5g41810 7.0 99.4 0.627 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMFPBV
At3g07350 6.9 99.4 0.532 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO
At2g30500 6.8 99.4 0.607 kinase interacting family protein
At5g07000 6.7 99.3 0.607 ST2B (SULFOTRANSFERASE 2B)
At2g20960 6.6 99.3 0.534 pEARLI4
At2g43430 6.6 99.3 0.676 GLX2-1 (GLYOXALASE 2-1)
At5g05500 6.5 99.3 0.549 pollen Ole e 1 allergen and extensin family protein
At1g28130 6.4 99.3 0.674 GH3.17
At2g46020 6.4 99.3 0.580 transcription regulatory protein SNF2, putative
At2g46230 6.4 99.3 0.555 -
At4g00840 6.4 99.3 0.622 zinc ion binding
At4g30640 6.4 99.3 0.567 F-box family protein (FBL19)
At5g44460 6.4 99.3 0.581 calcium-binding protein, putative
At5g63410 6.4 99.3 0.628 leucine-rich repeat transmembrane protein kinase, putative
At2g43040 6.3 99.2 0.517 NPG1 (no pollen germination 1)
At3g11340 6.1 99.2 0.512 UDP-glucoronosyl/UDP-glucosyl transferase family protein
At5g51420 6.1 99.2 0.581 long-chain-alcohol O-fatty-acyltransferase family protein / wax synthase family protein
At1g17190 6.0 99.2 0.701 ATGSTU26 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 26)
At2g39110 6.0 99.2 0.635 protein kinase, putative
At2g40420 6.0 99.2 0.608 amino acid transporter family protein
At2g46330 6.0 99.2 0.669 AGP16 (ARABINOGALACTAN PROTEIN 16)
At3g43800 5.9 99.1 0.670 ATGSTU27 (GLUTATHIONE S-TRANSFERASE TAU 27)
At1g09560 5.8 99.1 0.667 GLP5 (GERMIN-LIKE PROTEIN 5)
At1g74160 5.8 99.1 0.619 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFPBV
At1g08930 5.7 99.1 0.542 ERD6 (EARLY RESPONSE TO DEHYDRATION 6)
At2g27000 5.7 99.1 0.633 CYP705A8
At4g32890 5.7 99.1 0.634 zinc finger (GATA type) family protein
At1g78850 5.6 99.1 0.709 curculin-like (mannose-binding) lectin family protein
At2g23810 5.6 99.1 0.580 TET8 (TETRASPANIN8)
At2g38860 5.6 99.1 0.500 YLS5
At3g52360 5.6 99.1 0.666 F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P
At2g33050 5.4 99.0 0.539 AtRLP26 (Receptor Like Protein 26)
At2g45290 5.4 99.0 0.506 transketolase, putative

Metabolites

Inst. Type Regulated metabolite Std.R. P.R. D.F. D.R. KaPPA-View KEGG Formula Mass Measured mass
GC-MS unknown 23.1 99.7 5/5 1 - - - - 83
GC-MS unknown 16.3 99.4 5/5 1 - - - - 119 91 193 149 239
GC-MS unknown 12.9 99.1 5/5 2 - - - - 117 189 147 133
GC-MS unknown 10.8 98.8 3/5 1 - - - - 91 83 121 148 161
GC-MS unknown 9.0 98.3 5/5 3 - - - - 204 296 331 173 103
LC-MS Glutathione (oxidized form) 15.8 99.2 1/5 1.5 KPC00857 C00127 C20H32N6O12S2 612.1519625 613.1690
LC-MS unknown 8.7 98.5 1/5 1.1 - - - 464.1038 465.1116
LC-MS unknown 7.8 98.3 1/5 1.3 - - - 147.0516 148.0594
LC-MS unknown 6.9 98.1 1/5 1.0 - - - 407.0849 408.0927
LC-MS unknown 5.4 97.5 1/5 1.2 - - - 606.1820 607.1898
CE-MS unknown 18.5 99.5 5/5 1.5 - - - 227 228
CE-MS unknown 11.6 99.1 5/5 1.2 - - - 102 103
CE-MS unknown 10.7 99.0 5/5 1.4 - - - 168 167
CE-MS unknown 8.0 98.6 5/5 1.3 - - - 208 209
CE-MS unknown 7.8 98.6 5/5 1.3 - - - 155 156






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