The prediction of regulatory relationships associated with At3g43530

Query	At3g43530
Description	transposable element gene

Candidate genes that regulate At3g43530

Regulating gene	Std.R.	P.R.	C.R.	P.O.X.	Co-X	Functional description
At1g06850	50.4	100.0	C	100.0	-	AtbZIP52 (Arabidopsis thaliana basic leucine zipper 52)
At1g04250	14.4	99.8	C	34.8	-	AXR3 (AUXIN RESISTANT 3)
At1g62990	10.2	99.7	S	100.0	-	KNAT7 (KNOTTED-LIKE HOMEOBOX OF ARABIDOPSIS THALIANA 7)
At2g46130	6.9	99.4	C	100.0	-	WRKY43
At1g31910	6.0	99.2	N	97.3	-	GHMP kinase family protein
At2g17570	5.6	99.1	N	100.0	-	undecaprenyl pyrophosphate synthetase family protein / UPP synthetase family protein
At5g18240	5.4	99.0	S	100.0	-	MYR1 (MYb-related protein 1)
at4g38620	5.0	98.8	-	-	-	-
At2g27940	4.8	98.7	C	100.0	-	zinc finger (C3HC4-type RING finger) family protein
At1g31910	4.1	98.2	N	97.3	-	GHMP kinase family protein
At1g24260	4.0	98.2	C	100.0	-	SEP3 (SEPALLATA3)
At1g11850	4.0	98.2	C	100.0	-	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;MBPOFVA
At1g13300	3.6	97.7	C	99.8	-	myb family transcription factor
At1g78950	3.5	97.6	D	92.3	-	beta-amyrin synthase, putative
At5g65310	3.4	97.5	O	100.0	-	ATHB5 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 5)
At1g56170	3.1	96.9	C	100.0	-	NF-YC2 (NUCLEAR FACTOR Y, SUBUNIT C2)
At2g46830	2.8	96.2	O	100.0	-	CCA1 (CIRCADIAN CLOCK ASSOCIATED 1)
At1g69180	2.7	95.9	C	100.0	-	CRC (CRABS CLAW)
At4g22250	2.5	95.2	C	100.0	-	zinc finger (C3HC4-type RING finger) family protein
At3g26830	2.5	95.2	C	100.0	-	PAD3 (PHYTOALEXIN DEFICIENT 3)
At1g43640	2.3	94.3	C	100.0	-	AtTLP5 (TUBBY LIKE PROTEIN 5)
At1g05850	2.3	94.3	C	99.9	-	POM1 (POM-POM1)
At5g41410	2.2	93.7	F	99.9	-	BEL1 (BELL 1)
At5g54230	2.2	93.7	C	100.0	-	MYB49 (myb domain protein 49)
At2g34830	2.1	93.1	D	100.0	-	WRKY35 (WRKY DNA-binding protein 35)
At5g16540	1.9	91.4	D	99.7	-	ZFN3 (ZINC FINGER NUCLEASE 3)
At1g68840	1.9	91.4	C	99.0	-	RAV2 (REGULATOR OF THE ATPASE OF THE VACUOLAR MEMBRANE)
At3g25710	1.9	91.4	C	100.0	-	BHLH32 (BASIC HELIX-LOOP-HELIX 32)
At1g22640	1.9	91.4	C	100.0	-	MYB3 (MYB DOMAIN PROTEIN 3)
At1g06170	1.8	90.3	-	100.0	-	basic helix-loop-helix (bHLH) family protein
At2g16910	1.6	87.5	-	100.0	-	AMS (ABORTED MICROSPORES)
At4g22250	1.5	85.6	C	100.0	-	zinc finger (C3HC4-type RING finger) family protein
At3g16920	1.4	83.3	D	8.2	-	chitinase
At3g46130	1.3	80.4	C	100.0	-	MYB111 (MYB DOMAIN PROTEIN 111)
At1g51070	1.2	76.9	C	99.9	-	basic helix-loop-helix (bHLH) family protein
At2g18300	1.2	76.9	C	100.0	-	basic helix-loop-helix (bHLH) family protein
At4g18020	1.2	76.9	C	99.9	-	APRR2
At4g34410	1.1	72.6	C	100.0	-	RRTF1 ({REDOX RESPONSIVE TRANSCRIPTION FACTOR 1)
At5g47390	1.1	72.6	C	99.7	-	myb family transcription factor
At1g35460	1.1	72.6	C	100.0	-	basic helix-loop-helix (bHLH) family protein
At4g17600	1.0	67.6	C	100.0	-	LIL3:1
At4g09960	1.0	67.6	C	100.0	-	STK (SEEDSTICK)
At5g12850	1.0	67.6	N	98.1	-	zinc finger (CCCH-type) family protein
At3g54430	0.9	61.7	C	100.0	-	SRS6 (SHI-RELATED SEQUENCE 6)
At3g44460	0.9	61.7	C	100.0	-	DPBF2
At5g12840	0.9	61.7	F	100.0	-	NF-YA1 (NUCLEAR FACTOR Y, SUBUNIT A1)
At5g58900	0.8	55.2	O	100.0	-	myb family transcription factor
At4g34680	0.8	55.2	S	100.0	-	GATA transcription factor 3, putative (GATA-3)
At5g60920	0.7	48.3	C	99.9	-	COB (COBRA)
At4g29030	0.7	48.3	S	100.0	-	glycine-rich protein
At5g08750	0.7	48.3	C	99.7	-	zinc finger (C3HC4-type RING finger) family protein
At4g23450	0.7	48.3	C	100.0	-	zinc finger (C3HC4-type RING finger) family protein
At2g01760	0.6	41.3	C	99.8	-	ARR14 (ARABIDOPSIS RESPONSE REGULATOR 14)
At2g43000	0.6	41.3	-	100.0	-	anac042 (Arabidopsis NAC domain containing protein 42)
At1g61110	0.6	41.3	-	100.0	-	anac025 (Arabidopsis NAC domain containing protein 25)
At5g20240	0.6	41.3	D	89.1	-	PI (PISTILLATA)
At4g32880	0.6	41.3	C	99.7	-	ATHB-8 (HOMEOBOX GENE 8)
At1g54350	0.6	41.3	D	100.0	-	ABC transporter family protein
At5g49520	0.6	41.3	C	99.8	-	WRKY48
At5g47230	0.6	41.3	C	100.0	-	ERF5 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 5)
At5g62610	0.6	41.3	C	100.0	-	basic helix-loop-helix (bHLH) family protein
At4g23600	0.5	34.8	C	100.0	-	CORI3 (CORONATINE INDUCED 1)
At2g02080	0.5	34.8	C	80.4	-	AtIDD4 (Arabidopsis thaliana Indeterminate(ID)-Domain 4)
At1g54160	0.5	34.8	C	100.0	-	NF-YA5 (NUCLEAR FACTOR Y, SUBUNIT A5)
At2g42830	0.5	34.8	C	100.0	-	SHP2 (SHATTERPROOF 2)
At1g79430	0.5	34.8	C	100.0	-	APL (ALTERED PHLOEM DEVELOPMENT)
At3g54220	0.5	34.8	C	100.0	-	SCR (SCARECROW)
At1g08810	0.5	34.8	C	100.0	-	MYB60 (myb domain protein 60)
At4g28500	0.4	28.9	N	100.0	-	ANAC073 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 73)
At1g66350	0.4	28.9	C	100.0	-	RGL1 (RGA-LIKE 1)
At1g68670	0.4	28.9	C	99.3	-	myb family transcription factor
At2g22900	0.4	28.9	C	100.0	-	galactosyl transferase GMA12/MNN10 family protein
At1g14920	0.4	28.9	C	100.0	-	GAI (GIBBERELLIC ACID INSENSITIVE)
At1g24625	0.4	28.9	C	100.0	-	ZFP7 (ZINC FINGER PROTEIN 7)
At5g07690	0.4	28.9	C	100.0	-	ATMYB29 (ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 29)
control	0.4	28.9	-	-	-	-

Back to the RnR portal site

Back to the KAGIANA project homepage