| Std2 GX | %ile | GSM ID | Assay name | GSE ID | Experiment title | Link to GEO |
| 93.3 | 100.0 | GSM320468 | protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: Mo17 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes |  |
| 18.1 | 99.2 | GSM320473 | protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: CML69 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 11.3 | 98.5 | GSM320463 | protocol: Methylation filtration (MF) - genotype: CML69 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 8.7 | 98.1 | GSM320470 | protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: Mo17 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 8.3 | 98.0 | GSM320466 | protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: B73 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 7.7 | 97.9 | GSM320449 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 7.0 | 97.7 | GSM320456 | protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 5.2 | 96.9 | GSM320448 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 5.1 | 96.8 | GSM320453 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 3.7 | 95.4 | GSM253274 | ZM_8d_Mock_3inf_I | GSE10023 | Maize gene expression during infection with Ustilago maydis | |
| 3.2 | 94.5 | GSM253249 | ZM_12h_SG200_3inf_II | GSE10023 | Maize gene expression during infection with Ustilago maydis | |
| 3.1 | 94.3 | GSM320455 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 2.8 | 93.5 | GSM320459 | protocol: Methylation filtration (MF) - genotype: Mo17 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 2.8 | 93.5 | GSM206322 | Lower pulvinus 60 min total RNA biorep 2 | GSE8320 | Transcriptional and translational gene regulation in the maize pulvinus | |
| 2.7 | 93.2 | GSM320461 | protocol: Methylation filtration (MF) - genotype: Mo17 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 2.6 | 92.9 | GSM258172 | B37 11-day seedling aerial tissue biological replicate 1 | GSE10236 | Similar patterns of additive and non-additive gene expression in maize hybrids with varying levels of heterosis | |
| 2.5 | 92.6 | GSM258176 | Oh43 11-day seedling aerial tissue biological replicate 1 | GSE10236 | Similar patterns of additive and non-additive gene expression in maize hybrids with varying levels of heterosis | |
| 2.4 | 92.2 | GSM206314 | Upper pulvinus 15 min total RNA biorep 2 | GSE8320 | Transcriptional and translational gene regulation in the maize pulvinus | |
| 2.4 | 92.2 | GSM162264 | Mutant 2 with array type maize from Affymetrix | GSE7030 | Phenotypic and molecular characterisation of a novel Bt2 allele in maize | |
| 2.4 | 92.2 | GSM253280 | ZM_8d_SG200_3Alu_I | GSE10023 | Maize gene expression during infection with Ustilago maydis | |
