| Std2 GX | %ile | GSM ID | Assay name | GSE ID | Experiment title | Link to GEO |
| 83.3 | 100.0 | GSM320472 | protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: CML69 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes |  |
| 19.4 | 99.3 | GSM320473 | protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: CML69 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 11.6 | 98.6 | GSM320466 | protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: B73 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 7.2 | 97.8 | GSM320451 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 7.1 | 97.7 | GSM320447 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 5.0 | 96.7 | GSM320454 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 4.4 | 96.2 | GSM320443 | protocol: mRNA - genotype: Mo17 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 4.0 | 95.8 | GSM206290 | Upper pulvinus 15 min total RNA biorep 1 | GSE8320 | Transcriptional and translational gene regulation in the maize pulvinus | |
| 4.0 | 95.8 | GSM253262 | ZM_4d_Mock_3inf_I | GSE10023 | Maize gene expression during infection with Ustilago maydis | |
| 3.8 | 95.5 | GSM253257 | ZM_2d_Mock_3inf_II | GSE10023 | Maize gene expression during infection with Ustilago maydis | |
| 3.8 | 95.5 | GSM320467 | protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: B73 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 3.7 | 95.4 | GSM320457 | protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 3.7 | 95.4 | GSM320464 | protocol: Methylation filtration (MF) - genotype: CML69 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 3.6 | 95.2 | GSM253264 | ZM_4d_Mock_3inf_III | GSE10023 | Maize gene expression during infection with Ustilago maydis | |
| 3.4 | 94.9 | GSM253269 | ZM_4.5d_Mock_3inf_II | GSE10023 | Maize gene expression during infection with Ustilago maydis | |
| 3.3 | 94.7 | GSM320471 | protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: CML69 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 3.1 | 94.3 | GSM258178 | B84xB73 11-day seedling aerial tissue biological replicate 1 | GSE10236 | Similar patterns of additive and non-additive gene expression in maize hybrids with varying levels of heterosis | |
| 3.0 | 94.0 | GSM206292 | Upper pulvinus 60 min total RNA biorep 1 | GSE8320 | Transcriptional and translational gene regulation in the maize pulvinus | |
| 2.8 | 93.5 | GSM206301 | Upper pulvinus 5 min polysomal RNA biorep 1 | GSE8320 | Transcriptional and translational gene regulation in the maize pulvinus | |
| 2.7 | 93.2 | GSM320465 | protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: B73 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
