| Std2 GX | %ile | GSM ID | Assay name | GSE ID | Experiment title | Link to GEO |
| 4.2 | 96.0 | GSM304394 | Stable transgenic rice line (1) | GSE12069 | Mycroarray analyses reveal that plant mutagenesis may induce more transcriptomic changes than transgene insertion |  |
| 4.0 | 95.9 | GSM159173 | Rice coleoptiles, 4 days old, aerobic, replicate N.2 (sample#10) | GSE6908 | Transcript Profiling of the Aerobic and Anoxic Rice Coleoptile | |
| 3.9 | 95.8 | GSM304395 | Control for the stable transgenic rice line | GSE12069 | Mycroarray analyses reveal that plant mutagenesis may induce more transcriptomic changes than transgene insertion | |
| 3.7 | 95.6 | GSM304397 | Control for the stable transgenic rice line (1) | GSE12069 | Mycroarray analyses reveal that plant mutagenesis may induce more transcriptomic changes than transgene insertion | |
| 3.5 | 95.3 | GSM304671 | Unstable mutant line | GSE12069 | Mycroarray analyses reveal that plant mutagenesis may induce more transcriptomic changes than transgene insertion | |
| 3.4 | 95.2 | GSM304677 | Unstable mutant line (1) | GSE12069 | Mycroarray analyses reveal that plant mutagenesis may induce more transcriptomic changes than transgene insertion | |
| 3.3 | 95.1 | GSM304390 | Stable transgenic rice line | GSE12069 | Mycroarray analyses reveal that plant mutagenesis may induce more transcriptomic changes than transgene insertion | |
| 3.3 | 95.1 | GSM304669 | Control for the stable mutant rice line (1) | GSE12069 | Mycroarray analyses reveal that plant mutagenesis may induce more transcriptomic changes than transgene insertion | |
| 3.3 | 95.1 | GSM304497 | Unstable transgenic line | GSE12069 | Mycroarray analyses reveal that plant mutagenesis may induce more transcriptomic changes than transgene insertion | |
| 2.9 | 94.5 | GSM159172 | Rice coleoptiles, 4 days old, aerobic, replicate N.1 (sample#9) | GSE6908 | Transcript Profiling of the Aerobic and Anoxic Rice Coleoptile | |
| 2.9 | 94.5 | GSM304646 | Unstable transgenic line (1) | GSE12069 | Mycroarray analyses reveal that plant mutagenesis may induce more transcriptomic changes than transgene insertion | |
| 2.8 | 94.3 | GSM304654 | Mutant stable line (1) | GSE12069 | Mycroarray analyses reveal that plant mutagenesis may induce more transcriptomic changes than transgene insertion | |
| 2.7 | 94.1 | GSM304664 | Control for the stable mutant rice line | GSE12069 | Mycroarray analyses reveal that plant mutagenesis may induce more transcriptomic changes than transgene insertion | |
| 2.7 | 94.1 | GSM431931 | Root- -Fe-P biological rep1 | GSE17245 | Transcriptome analysis of iron and phosphorus interaction in rice seedlings | |
| 2.7 | 94.1 | GSM431926 | Root- +Fe+P biological rep2 | GSE17245 | Transcriptome analysis of iron and phosphorus interaction in rice seedlings | |
| 2.7 | 94.1 | GSM359903 | FL478 root, control, biological replicate 2 | GSE14403 | Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stress | |
| 2.7 | 94.1 | GSM304653 | Mutant stable line | GSE12069 | Mycroarray analyses reveal that plant mutagenesis may induce more transcriptomic changes than transgene insertion | |
| 2.7 | 94.1 | GSM359922 | Pokkali root, salt-treated, biological replicate 1 | GSE14403 | Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stress | |
| 2.7 | 94.1 | GSM304485 | Control for the unstable lines (1) | GSE12069 | Mycroarray analyses reveal that plant mutagenesis may induce more transcriptomic changes than transgene insertion | |
| 2.6 | 93.8 | GSM359902 | FL478 root, control, biological replicate 1 | GSE14403 | Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stress | |
