Specifically-expressed experiments

Gene ID At5g62330
Gene name -
Functional description F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
446.2100.0GSM265429Arabidopsis, root, longitudinal zone 2, -Fe conditions, rep 2GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatmentLink to GEO
338.0100.0GSM266664Arabidopsis, root cells, epidermis and lateral root cap, -Fe, replicate 3GSE10501Expression analysis of root cell-types after iron deficiency (-Fe) treatmentLink to GEO
284.6100.0GSM266663Arabidopsis, root cells, epidermis and lateral root cap, -Fe, replicate 2GSE10501Expression analysis of root cell-types after iron deficiency (-Fe) treatmentLink to GEO
216.3100.0GSM266662Arabidopsis, root cells, epidermis and lateral root cap, -Fe, replicate 1GSE10501Expression analysis of root cell-types after iron deficiency (-Fe) treatmentLink to GEO
207.5100.0GSM252691Section of Root from 270 mm to 340 mm harvested immediately rep2GSE9996Organ regeneration in plants is independent of stem cell niche activityLink to GEO
176.2100.0GSM291101root - 21% oxygen - 2h - EGSE11558transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plantsLink to GEO
132.799.9GSM218292At_Standard_cpctry-2GSE8787Expression analysis of the salt stress response in Arabidopsis mutants with defects in hair patterningLink to GEO
131.899.9GSM266665Arabidopsis, root cells, epidermis and lateral root cap, -Fe, replicate 4GSE10501Expression analysis of root cell-types after iron deficiency (-Fe) treatmentLink to GEO
119.299.9GSM252690Section of Root from 270 mm to 340 mm harvested immediately rep1GSE9996Organ regeneration in plants is independent of stem cell niche activityLink to GEO
119.199.9GSM265415Arabidopsis, root cells, -Fe, replicate 2GSE10496Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe)Link to GEO
107.399.9GSM291108root - 21% oxygen - 2h - FGSE11558transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plantsLink to GEO
104.299.9GSM290757root - 01% oxygen - 30min - FGSE11558transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plantsLink to GEO
100.199.9GSM184891Arabidopsis, root cells, epidermis and lateral root cap, standard conditions, replicate 3GSE7641Expression analysis of root cell-types after treatment with saltLink to GEO
98.299.9GSM252692Section of Root from 270 mm to 340 mm harvested immediately rep3GSE9996Organ regeneration in plants is independent of stem cell niche activityLink to GEO
96.799.9GSM184890Arabidopsis, root cells, epidermis and lateral root cap, standard conditions, replicate 2GSE7641Expression analysis of root cell-types after treatment with saltLink to GEO
96.199.9GSM133981Birnbaum_1-11_StageII-4_Rep4_ATH1GSE5749A gene expression map of the Arabidopsis rootLink to GEO
82.799.9GSM291020root - 08% oxygen - 2h - FGSE11558transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plantsLink to GEO
60.599.8GSM133979Birnbaum_1-9_StageII-2_Rep2_ATH1GSE5749A gene expression map of the Arabidopsis rootLink to GEO
58.199.8GSM184889Arabidopsis, root cells, epidermis and lateral root cap, standard conditions, replicate 1GSE7641Expression analysis of root cell-types after treatment with saltLink to GEO
55.099.8GSM218291At_Standard_cpctry-1GSE8787Expression analysis of the salt stress response in Arabidopsis mutants with defects in hair patterningLink to GEO
52.399.8GSM265428Arabidopsis, root, longitudinal zone 2, -Fe conditions, rep 1GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatmentLink to GEO
51.399.8GSM252672Regenerating Stump of Root Tip Cut at 130 mm first and then Recut after 5 hrs Taking 70 mm of Stump (4dpg) rep2GSE9996Organ regeneration in plants is independent of stem cell niche activityLink to GEO
44.399.8GSM291113root - 21% oxygen - 30min - FGSE11558transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plantsLink to GEO
44.299.8GSM265416Arabidopsis, root cells, -Fe, replicate 3GSE10496Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe)Link to GEO
39.999.8GSM143298Low_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
38.099.8GSM143310Tsu_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
37.099.7GSM143300Ts_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
35.999.7GSM143299High_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
35.599.7GSM143308Tsu_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
35.199.7GSM143307Low_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
34.199.7GSM265421Arabidopsis, root, longitudinal zone 2, standard conditions, rep 2GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatmentLink to GEO
32.399.7GSM253648Col-0-1GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
32.099.7GSM143302Ts_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
31.699.7GSM290753root - 01% oxygen - 2h - EGSE11558transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plantsLink to GEO
28.499.7GSM252669Regenerating Stump of Root Tip Cut at 130 mm first and then Recut after 0 hrs Taking 70 mm of Stump (4dpg) rep3GSE9996Organ regeneration in plants is independent of stem cell niche activityLink to GEO
27.099.7GSM253649Col-0-2GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
26.999.7GSM143301Ts_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
26.399.7GSM184834Arabidopsis, root, longitudinal zone 2, standard conditions, replicate 4GSE7639Expression analysis of root developmental zones after treatment with saltLink to GEO
24.799.6GSM253652Ler 2GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
24.699.6GSM218590Protoplasted root cells 2hr transitory KNO3 treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
24.199.6GSM218294At_NaCl_cpctry-2GSE8787Expression analysis of the salt stress response in Arabidopsis mutants with defects in hair patterningLink to GEO
23.499.6GSM265420Arabidopsis, root, longitudinal zone 2, standard conditions, rep 1GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatmentLink to GEO
23.199.6GSM252671Regenerating Stump of Root Tip Cut at 130 mm first and then Recut after 5 hrs Taking 70 mm of Stump (4dpg) rep1GSE9996Organ regeneration in plants is independent of stem cell niche activityLink to GEO
22.599.6GSM143306High_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
21.799.6GSM143309Tsu_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
21.599.6GSM290761root - 04% oxygen - 2h - FGSE11558transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plantsLink to GEO
19.999.6GSM226546Slice4JWGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular functionLink to GEO
19.899.6GSM252670Regenerating Stump of Root Tip Cut at 130 mm first and then Recut after 0 hrs Taking 70 mm of Stump (4dpg) rep4GSE9996Organ regeneration in plants is independent of stem cell niche activityLink to GEO
19.499.6GSM253646Low_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
19.099.5GSM205430met1-3_leaf_fourth-selfed generation_rep02GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG MethylationLink to GEO
18.899.5GSM179975Arabidopsis ein2 mutant roots, mock treatment, replica 1GSE7432Ethylene and auxin interactions in the roots of Arabidopsis seedlingsLink to GEO
18.499.5GSM133978Birnbaum_1-8_StageII-1_Rep1_ATH1GSE5749A gene expression map of the Arabidopsis rootLink to GEO
18.499.5GSM184833Arabidopsis, root, longitudinal zone 2, standard conditions, replicate 3GSE7639Expression analysis of root developmental zones after treatment with saltLink to GEO
18.099.5GSM179976Arabidopsis ein2 mutant roots, mock treatment, replica 2GSE7432Ethylene and auxin interactions in the roots of Arabidopsis seedlingsLink to GEO
17.199.5GSM253647Col-0 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
17.099.5GSM252674Regenerating Stump of Root Tip Cut at 130 mm first and then Recut after 5 hrs Taking 70 mm of Stump (4dpg) rep4GSE9996Organ regeneration in plants is independent of stem cell niche activityLink to GEO
16.299.5GSM226545Slice3JWGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular functionLink to GEO
16.299.5GSM218588Protoplasted root cells 2hr transitory KNO3 treated, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
14.899.4GSM218296At_Standard_scm-2GSE8787Expression analysis of the salt stress response in Arabidopsis mutants with defects in hair patterningLink to GEO
14.699.4GSM253650Ler 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
14.599.4GSM253645High_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
14.099.4GSM205428met1-3_leaf_fourth-selfed generation_rep01GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG MethylationLink to GEO
13.799.4ArrayExpressE-MEXP-791-raw-cel-1122937605---
13.199.4GSM131556ATGE_3_BGSE5631AtGenExpress: Developmental series (roots)Link to GEO
12.799.3GSM253651Ler 1GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
12.699.3ArrayExpressE-MEXP-722-raw-cel-1062243314---
12.699.3GSM266671Arabidopsis, root cells, cortex, -Fe, replicate 3GSE10501Expression analysis of root cell-types after iron deficiency (-Fe) treatmentLink to GEO
12.399.3GSM218288At_Standard_wermyb23-2GSE8787Expression analysis of the salt stress response in Arabidopsis mutants with defects in hair patterningLink to GEO
12.399.3GSM226534L4SBGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular functionLink to GEO
12.099.3GSM226535L5SBGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular functionLink to GEO
11.999.3ArrayExpressE-MEXP-722-raw-cel-1062243108---
11.899.3GSM179977Arabidopsis ein2 mutant roots, IAA treatment, replica 1GSE7432Ethylene and auxin interactions in the roots of Arabidopsis seedlingsLink to GEO
11.899.3ArrayExpressE-MEXP-722-raw-cel-1062242857---
11.799.3GSM131557ATGE_3_CGSE5631AtGenExpress: Developmental series (roots)Link to GEO
11.499.3GSM265427Arabidopsis, root, longitudinal zone 1, -Fe conditions, rep 2GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatmentLink to GEO
11.299.2GSM218295At_Standard_scm-1GSE8787Expression analysis of the salt stress response in Arabidopsis mutants with defects in hair patterningLink to GEO
11.099.2GSM205364met1-3_leaf_second-selfed generation_rep01GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG MethylationLink to GEO
10.999.2GSM205426met1-3_leaf_second-selfed generation_rep02GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG MethylationLink to GEO
10.999.2GSM218287At_Standard_wermyb23-1GSE8787Expression analysis of the salt stress response in Arabidopsis mutants with defects in hair patterningLink to GEO
10.599.2GSM179978Arabidopsis ein2 mutant roots, IAA treatment, replica 2GSE7432Ethylene and auxin interactions in the roots of Arabidopsis seedlingsLink to GEO
10.599.2GSM131555ATGE_3_AGSE5631AtGenExpress: Developmental series (roots)Link to GEO
10.399.2GSM291098root - 08% oxygen - 48h - FGSE11558transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plantsLink to GEO
10.399.2ArrayExpressE-MEXP-791-raw-cel-1122937587---
9.999.1GSM218293At_NaCl_cpctry-1GSE8787Expression analysis of the salt stress response in Arabidopsis mutants with defects in hair patterningLink to GEO
9.899.1GSM290825root - 04% oxygen - 30min - FGSE11558transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plantsLink to GEO
9.599.1GSM290755root - 01% oxygen - 2h - FGSE11558transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plantsLink to GEO
9.599.1ArrayExpressE-MEXP-791-raw-cel-1122937623---
9.499.1ArrayExpressE-MEXP-722-raw-cel-1062243390---
9.499.1ArrayExpressE-MEXP-722-raw-cel-1062243429---
8.999.0GSM179958Arabidopsis roots, air treatment, replica 1GSE7432Ethylene and auxin interactions in the roots of Arabidopsis seedlingsLink to GEO



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