Specifically-expressed experiments

Gene ID	At5g62330
Gene name	-
Functional description	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
446.2	100.0	GSM265429	Arabidopsis, root, longitudinal zone 2, -Fe conditions, rep 2	GSE10497	Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
338.0	100.0	GSM266664	Arabidopsis, root cells, epidermis and lateral root cap, -Fe, replicate 3	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
284.6	100.0	GSM266663	Arabidopsis, root cells, epidermis and lateral root cap, -Fe, replicate 2	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
216.3	100.0	GSM266662	Arabidopsis, root cells, epidermis and lateral root cap, -Fe, replicate 1	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
207.5	100.0	GSM252691	Section of Root from 270 mm to 340 mm harvested immediately rep2	GSE9996	Organ regeneration in plants is independent of stem cell niche activity
176.2	100.0	GSM291101	root - 21% oxygen - 2h - E	GSE11558	transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
132.7	99.9	GSM218292	At_Standard_cpctry-2	GSE8787	Expression analysis of the salt stress response in Arabidopsis mutants with defects in hair patterning
131.8	99.9	GSM266665	Arabidopsis, root cells, epidermis and lateral root cap, -Fe, replicate 4	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
119.2	99.9	GSM252690	Section of Root from 270 mm to 340 mm harvested immediately rep1	GSE9996	Organ regeneration in plants is independent of stem cell niche activity
119.1	99.9	GSM265415	Arabidopsis, root cells, -Fe, replicate 2	GSE10496	Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe)
107.3	99.9	GSM291108	root - 21% oxygen - 2h - F	GSE11558	transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
104.2	99.9	GSM290757	root - 01% oxygen - 30min - F	GSE11558	transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
100.1	99.9	GSM184891	Arabidopsis, root cells, epidermis and lateral root cap, standard conditions, replicate 3	GSE7641	Expression analysis of root cell-types after treatment with salt
98.2	99.9	GSM252692	Section of Root from 270 mm to 340 mm harvested immediately rep3	GSE9996	Organ regeneration in plants is independent of stem cell niche activity
96.7	99.9	GSM184890	Arabidopsis, root cells, epidermis and lateral root cap, standard conditions, replicate 2	GSE7641	Expression analysis of root cell-types after treatment with salt
96.1	99.9	GSM133981	Birnbaum_1-11_StageII-4_Rep4_ATH1	GSE5749	A gene expression map of the Arabidopsis root
82.7	99.9	GSM291020	root - 08% oxygen - 2h - F	GSE11558	transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
60.5	99.8	GSM133979	Birnbaum_1-9_StageII-2_Rep2_ATH1	GSE5749	A gene expression map of the Arabidopsis root
58.1	99.8	GSM184889	Arabidopsis, root cells, epidermis and lateral root cap, standard conditions, replicate 1	GSE7641	Expression analysis of root cell-types after treatment with salt
55.0	99.8	GSM218291	At_Standard_cpctry-1	GSE8787	Expression analysis of the salt stress response in Arabidopsis mutants with defects in hair patterning
52.3	99.8	GSM265428	Arabidopsis, root, longitudinal zone 2, -Fe conditions, rep 1	GSE10497	Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
51.3	99.8	GSM252672	Regenerating Stump of Root Tip Cut at 130 mm first and then Recut after 5 hrs Taking 70 mm of Stump (4dpg) rep2	GSE9996	Organ regeneration in plants is independent of stem cell niche activity
44.3	99.8	GSM291113	root - 21% oxygen - 30min - F	GSE11558	transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
44.2	99.8	GSM265416	Arabidopsis, root cells, -Fe, replicate 3	GSE10496	Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe)
39.9	99.8	GSM143298	Low_Na_seg_pool_ts_col_F2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
38.0	99.8	GSM143310	Tsu_genomic_hyb_1	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
37.0	99.7	GSM143300	Ts_genomic_hyb_3	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
35.9	99.7	GSM143299	High_Na_seg_pool_ts_col_F2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
35.5	99.7	GSM143308	Tsu_genomic_hyb_3	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
35.1	99.7	GSM143307	Low_Na_seg_pool_tsu_col_F2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
34.1	99.7	GSM265421	Arabidopsis, root, longitudinal zone 2, standard conditions, rep 2	GSE10497	Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
32.3	99.7	GSM253648	Col-0-1	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
32.0	99.7	GSM143302	Ts_genomic_hyb_1	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
31.6	99.7	GSM290753	root - 01% oxygen - 2h - E	GSE11558	transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
28.4	99.7	GSM252669	Regenerating Stump of Root Tip Cut at 130 mm first and then Recut after 0 hrs Taking 70 mm of Stump (4dpg) rep3	GSE9996	Organ regeneration in plants is independent of stem cell niche activity
27.0	99.7	GSM253649	Col-0-2	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
26.9	99.7	GSM143301	Ts_genomic_hyb_2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
26.3	99.7	GSM184834	Arabidopsis, root, longitudinal zone 2, standard conditions, replicate 4	GSE7639	Expression analysis of root developmental zones after treatment with salt
24.7	99.6	GSM253652	Ler 2	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
24.6	99.6	GSM218590	Protoplasted root cells 2hr transitory KNO3 treated, biological rep3	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
24.1	99.6	GSM218294	At_NaCl_cpctry-2	GSE8787	Expression analysis of the salt stress response in Arabidopsis mutants with defects in hair patterning
23.4	99.6	GSM265420	Arabidopsis, root, longitudinal zone 2, standard conditions, rep 1	GSE10497	Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
23.1	99.6	GSM252671	Regenerating Stump of Root Tip Cut at 130 mm first and then Recut after 5 hrs Taking 70 mm of Stump (4dpg) rep1	GSE9996	Organ regeneration in plants is independent of stem cell niche activity
22.5	99.6	GSM143306	High_Na_seg_pool_tsu_col_F2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
21.7	99.6	GSM143309	Tsu_genomic_hyb_2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
21.5	99.6	GSM290761	root - 04% oxygen - 2h - F	GSE11558	transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
19.9	99.6	GSM226546	Slice4JW	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
19.8	99.6	GSM252670	Regenerating Stump of Root Tip Cut at 130 mm first and then Recut after 0 hrs Taking 70 mm of Stump (4dpg) rep4	GSE9996	Organ regeneration in plants is independent of stem cell niche activity
19.4	99.6	GSM253646	Low_Mo_seg_pool_Ler_col_F2	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
19.0	99.5	GSM205430	met1-3_leaf_fourth-selfed generation_rep02	GSE8279	Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
18.8	99.5	GSM179975	Arabidopsis ein2 mutant roots, mock treatment, replica 1	GSE7432	Ethylene and auxin interactions in the roots of Arabidopsis seedlings
18.4	99.5	GSM133978	Birnbaum_1-8_StageII-1_Rep1_ATH1	GSE5749	A gene expression map of the Arabidopsis root
18.4	99.5	GSM184833	Arabidopsis, root, longitudinal zone 2, standard conditions, replicate 3	GSE7639	Expression analysis of root developmental zones after treatment with salt
18.0	99.5	GSM179976	Arabidopsis ein2 mutant roots, mock treatment, replica 2	GSE7432	Ethylene and auxin interactions in the roots of Arabidopsis seedlings
17.1	99.5	GSM253647	Col-0 3	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
17.0	99.5	GSM252674	Regenerating Stump of Root Tip Cut at 130 mm first and then Recut after 5 hrs Taking 70 mm of Stump (4dpg) rep4	GSE9996	Organ regeneration in plants is independent of stem cell niche activity
16.2	99.5	GSM226545	Slice3JW	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
16.2	99.5	GSM218588	Protoplasted root cells 2hr transitory KNO3 treated, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
14.8	99.4	GSM218296	At_Standard_scm-2	GSE8787	Expression analysis of the salt stress response in Arabidopsis mutants with defects in hair patterning
14.6	99.4	GSM253650	Ler 3	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
14.5	99.4	GSM253645	High_Mo_seg_pool_Ler_col_F2	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
14.0	99.4	GSM205428	met1-3_leaf_fourth-selfed generation_rep01	GSE8279	Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
13.7	99.4	ArrayExpress	E-MEXP-791-raw-cel-1122937605	-	-	-
13.1	99.4	GSM131556	ATGE_3_B	GSE5631	AtGenExpress: Developmental series (roots)
12.7	99.3	GSM253651	Ler 1	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
12.6	99.3	ArrayExpress	E-MEXP-722-raw-cel-1062243314	-	-	-
12.6	99.3	GSM266671	Arabidopsis, root cells, cortex, -Fe, replicate 3	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
12.3	99.3	GSM218288	At_Standard_wermyb23-2	GSE8787	Expression analysis of the salt stress response in Arabidopsis mutants with defects in hair patterning
12.3	99.3	GSM226534	L4SB	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
12.0	99.3	GSM226535	L5SB	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
11.9	99.3	ArrayExpress	E-MEXP-722-raw-cel-1062243108	-	-	-
11.8	99.3	GSM179977	Arabidopsis ein2 mutant roots, IAA treatment, replica 1	GSE7432	Ethylene and auxin interactions in the roots of Arabidopsis seedlings
11.8	99.3	ArrayExpress	E-MEXP-722-raw-cel-1062242857	-	-	-
11.7	99.3	GSM131557	ATGE_3_C	GSE5631	AtGenExpress: Developmental series (roots)
11.4	99.3	GSM265427	Arabidopsis, root, longitudinal zone 1, -Fe conditions, rep 2	GSE10497	Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
11.2	99.2	GSM218295	At_Standard_scm-1	GSE8787	Expression analysis of the salt stress response in Arabidopsis mutants with defects in hair patterning
11.0	99.2	GSM205364	met1-3_leaf_second-selfed generation_rep01	GSE8279	Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
10.9	99.2	GSM205426	met1-3_leaf_second-selfed generation_rep02	GSE8279	Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
10.9	99.2	GSM218287	At_Standard_wermyb23-1	GSE8787	Expression analysis of the salt stress response in Arabidopsis mutants with defects in hair patterning
10.5	99.2	GSM179978	Arabidopsis ein2 mutant roots, IAA treatment, replica 2	GSE7432	Ethylene and auxin interactions in the roots of Arabidopsis seedlings
10.5	99.2	GSM131555	ATGE_3_A	GSE5631	AtGenExpress: Developmental series (roots)
10.3	99.2	GSM291098	root - 08% oxygen - 48h - F	GSE11558	transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
10.3	99.2	ArrayExpress	E-MEXP-791-raw-cel-1122937587	-	-	-
9.9	99.1	GSM218293	At_NaCl_cpctry-1	GSE8787	Expression analysis of the salt stress response in Arabidopsis mutants with defects in hair patterning
9.8	99.1	GSM290825	root - 04% oxygen - 30min - F	GSE11558	transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
9.5	99.1	GSM290755	root - 01% oxygen - 2h - F	GSE11558	transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
9.5	99.1	ArrayExpress	E-MEXP-791-raw-cel-1122937623	-	-	-
9.4	99.1	ArrayExpress	E-MEXP-722-raw-cel-1062243390	-	-	-
9.4	99.1	ArrayExpress	E-MEXP-722-raw-cel-1062243429	-	-	-
8.9	99.0	GSM179958	Arabidopsis roots, air treatment, replica 1	GSE7432	Ethylene and auxin interactions in the roots of Arabidopsis seedlings

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