Specifically-expressed experiments

Gene ID	At5g62260
Gene name	DNA binding
Functional description	F:DNA binding;P:regulation of transcription, DNA-dependent;C:nucleus;PMFVOB

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
265.0	100.0	GSM184556	Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
96.3	99.9	GSM184916	Arabidopsis, root cells, endodermis and quiescent center, 140 mM NaCl, replicate 1	GSE7641	Expression analysis of root cell-types after treatment with salt
70.7	99.9	GSM253645	High_Mo_seg_pool_Ler_col_F2	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
66.8	99.8	GSM253647	Col-0 3	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
65.8	99.8	GSM253650	Ler 3	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
64.8	99.8	GSM284386	Arabidopsis GSUS3	GSE11262	Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.
58.4	99.8	GSM253652	Ler 2	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
53.6	99.8	GSM253649	Col-0-2	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
52.9	99.8	GSM143298	Low_Na_seg_pool_ts_col_F2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
52.3	99.8	GSM143306	High_Na_seg_pool_tsu_col_F2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
49.8	99.8	GSM253648	Col-0-1	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
49.8	99.8	GSM143309	Tsu_genomic_hyb_2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
48.5	99.8	GSM143310	Tsu_genomic_hyb_1	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
44.0	99.8	GSM184530	Stele root cells 2hr continuous KNO3 treated, biological rep3	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
41.7	99.8	GSM253646	Low_Mo_seg_pool_Ler_col_F2	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
41.1	99.8	GSM253651	Ler 1	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
40.4	99.8	GSM143307	Low_Na_seg_pool_tsu_col_F2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
38.7	99.8	GSM143302	Ts_genomic_hyb_1	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
37.9	99.8	GSM143299	High_Na_seg_pool_ts_col_F2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
37.0	99.7	GSM184551	Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
34.9	99.7	GSM143308	Tsu_genomic_hyb_3	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
34.5	99.7	GSM176879	AWP_Control_1	GSE7334	Microarray Analysis of Arabidopsis Genome Response to Aluminum Stress
33.7	99.7	GSM184523	Stele root cells 2hr KCl control treated, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
33.0	99.7	GSM143301	Ts_genomic_hyb_2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
32.0	99.7	GSM284387	Arabidopsis GSUS4b	GSE11262	Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.
30.9	99.7	GSM143300	Ts_genomic_hyb_3	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
26.3	99.7	GSM184524	Stele root cells 2hr KCl control treated, biological rep3	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
25.1	99.6	GSM184522	Stele root cells 2hr KCl control treated, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
23.1	99.6	GSM184917	Arabidopsis, root cells, endodermis and quiescent center, 140 mM NaCl, replicate 2	GSE7641	Expression analysis of root cell-types after treatment with salt
22.5	99.6	GSM142594	DB001_ATH1_A4-Brown-cal	GSE6148	The trans-differentiation of cultured Arabidopsis cells
22.2	99.6	GSM184529	Stele root cells 2hr continuous KNO3 treated, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
21.2	99.6	GSM176876	AWP_AL_Txed_1	GSE7334	Microarray Analysis of Arabidopsis Genome Response to Aluminum Stress
21.1	99.6	GSM184537	Whole roots 2hr KCl control treated then frozen, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
20.9	99.6	GSM184528	Stele root cells 2hr continuous KNO3 treated, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
18.9	99.5	GSM142596	DB001_ATH1_A6-Brown-cal	GSE6148	The trans-differentiation of cultured Arabidopsis cells
18.8	99.5	GSM133762	Lindsey_1-14_torpedo-root_Rep1_ATH1	GSE5730	Transcriptional profiling of laser-capture micro-dissected embryonic tissues
17.3	99.5	GSM265413	Arabidopsis, whole roots, -Fe, replicate 3	GSE10496	Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe)
16.6	99.5	GSM176878	AWP_AL_Txed_2	GSE7334	Microarray Analysis of Arabidopsis Genome Response to Aluminum Stress
16.2	99.5	GSM311290	Laser capture microdissected (LCM) cellularized endosperm at the linear-cotyledon stage, biological replicate 2	GSE12403	Expression data from Arabidopsis seed compartments at the linear-cotyledon stage
16.1	99.5	GSM265474	Arabidopsis, whole roots, -Fe, 72 hour, rep 2	GSE10502	Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis roots
15.7	99.5	GSM189112	HSP90_Reduced_RNAi-A3_Biological_Replicate_2_Technical_Replicate_1	GSE7796	Phenotypic Diversity and Altered Environmental Plasticity in Arabidopsis thaliana with Reduced HSP90 Levels
15.5	99.5	GSM184525	Stele root cells 2hr transitory KNO3 treated, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
14.9	99.4	GSM176880	AWP_Control_2	GSE7334	Microarray Analysis of Arabidopsis Genome Response to Aluminum Stress
14.9	99.4	GSM184527	Stele root cells 2hr transitory KNO3 treated, biological rep3	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
14.8	99.4	GSM133966	Fukuda_1-11_10A_Rep1_ATH1	GSE5748	In vitro tracheary element transdifferentiation of Col-0 suspension cells.
13.9	99.4	GSM265411	Arabidopsis, whole roots, -Fe, replicate 1	GSE10496	Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe)
13.8	99.4	GSM142591	DB001_ATH1_A1-Brown-cal	GSE6148	The trans-differentiation of cultured Arabidopsis cells
13.8	99.4	GSM133959	Fukuda_1-4_2B_Rep2_ATH1	GSE5748	In vitro tracheary element transdifferentiation of Col-0 suspension cells.
12.6	99.3	GSM133958	Fukuda_1-3_2A_Rep1_ATH1	GSE5748	In vitro tracheary element transdifferentiation of Col-0 suspension cells.
12.0	99.3	GSM131322	AtGen_6-3422_Saltstress-Roots-6.0h_Rep2	GSE5623	AtGenExpress: Stress Treatments (Salt stress)
11.6	99.3	GSM157324	Hammond_3-17_Potassium-starved-root_Rep3_ATH1	GSE6825	Differential gene expression patterns in potassium-starved and Caesium-treated plants
11.3	99.3	GSM133975	Birnbaum_1-5_StageI-2_Rep2_ATH1	GSE5749	A gene expression map of the Arabidopsis root
11.2	99.2	GSM157315	Hammond_3-5_Potassium-starved-root_Rep1_ATH1	GSE6825	Differential gene expression patterns in potassium-starved and Caesium-treated plants
10.6	99.2	GSM265471	Arabidopsis, whole roots, -Fe, 48 hour, rep 1	GSE10502	Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis roots
10.4	99.2	GSM265472	Arabidopsis, whole roots, -Fe, 48 hour, rep 2	GSE10502	Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis roots
10.4	99.2	GSM133967	Fukuda_1-12_10B_Rep2_ATH1	GSE5748	In vitro tracheary element transdifferentiation of Col-0 suspension cells.
10.1	99.2	GSM133964	Fukuda_1-9_8A_Rep1_ATH1	GSE5748	In vitro tracheary element transdifferentiation of Col-0 suspension cells.
10.0	99.2	GSM311276	Laser capture microdissected (LCM) micropylar endospermr at the pre-globular stage, biological replicate 2	GSE12402	Expression data from Arabidopsis seed compartments at the pre-globular stage
9.9	99.1	GSM131269	AtGen_6-1321_Cold(4°C)-Roots-3.0h_Rep1	GSE5621	AtGenExpress: Stress Treatments (Cold stress)
9.9	99.1	GSM142593	DB001_ATH1_A3-Brown-cal	GSE6148	The trans-differentiation of cultured Arabidopsis cells
9.8	99.1	GSM131342	AtGen_6-4222_Droughtstress-Roots-1.0h_Rep2	GSE5624	AtGenExpress: Stress Treatments (Drought stress)
9.7	99.1	GSM157307	Gan_1-2_mutant-nitrate-minus(ANM)_Rep1_ATH1	GSE6824	Identification of genes involved in nutritional regulation of root architecture
9.7	99.1	GSM133977	Birnbaum_1-7_StageI-4_Rep4_ATH1	GSE5749	A gene expression map of the Arabidopsis root
9.6	99.1	GSM133965	Fukuda_1-10_8B_Rep2_ATH1	GSE5748	In vitro tracheary element transdifferentiation of Col-0 suspension cells.
9.6	99.1	GSM131353	AtGen_6-4521_Droughtstress-Roots-12.0h_Rep1	GSE5624	AtGenExpress: Stress Treatments (Drought stress)
9.5	99.1	GSM133957	Fukuda_1-2_0B_Rep2_ATH1	GSE5748	In vitro tracheary element transdifferentiation of Col-0 suspension cells.
9.4	99.1	GSM131233	AtGen_6-0121_Control-Roots-0.5h_Rep1	GSE5620	AtGenExpress: Stress Treatments (Control plants)
9.3	99.1	GSM133892	Schroeder_1-6_JS43-control-96h_Rep1_ATH1	GSE5744	Response to potassium starvation in roots
9.3	99.1	GSM131358	AtGen_6-4622_Droughtstress-Roots-24.0h_Rep2	GSE5624	AtGenExpress: Stress Treatments (Drought stress)
9.3	99.1	GSM131321	AtGen_6-3421_Saltstress-Roots-6.0h_Rep1	GSE5623	AtGenExpress: Stress Treatments (Salt stress)
9.3	99.1	GSM184496	Endodermis&Pericycle root cells 2hr KCl control treated, biological rep3	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
9.3	99.1	GSM265412	Arabidopsis, whole roots, -Fe, replicate 2	GSE10496	Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe)
9.1	99.1	GSM133891	Schroeder_1-3_JS45-control-48h_Rep1_ATH1	GSE5744	Response to potassium starvation in roots
9.1	99.1	GSM131107	Broadley_1-5_A5-Bo+P2-nutrient-replete_Rep2_ATH1	GSE5614	Changes in Gene Expression in Brassica oleracea Shoots during Phosphate Starvation (Cross-species study)
9.1	99.1	GSM157325	Hammond_3-18_Caesium-treated-root_Rep3_ATH1	GSE6825	Differential gene expression patterns in potassium-starved and Caesium-treated plants
8.9	99.0	GSM131105	Broadley_1-3_A3-Bo-P2-phosphate-starved_Rep2_ATH1	GSE5614	Changes in Gene Expression in Brassica oleracea Shoots during Phosphate Starvation (Cross-species study)
8.8	99.0	GSM157306	Gan_1-3_wildtype-nitrate-minus(WNM)_Rep2_ATH1	GSE6824	Identification of genes involved in nutritional regulation of root architecture
8.8	99.0	GSM157328	Hammond_3-12_Caesium-treated-root_Rep2_ATH1	GSE6825	Differential gene expression patterns in potassium-starved and Caesium-treated plants
8.6	99.0	GSM133122	S0_12H_B	GSE5688	AtGenExpress: Response to sulfate limitation

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