Specifically-expressed experiments

Gene ID	At5g61820
Gene name	-
Functional description	F:molecular_function unknown;P:biological_process unknown;C:vacuole;PO

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
29.3	99.7	GSM269821	WT leaf-drought-rep2	GSE10670	Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
27.9	99.7	GSM269823	T6 leaf-drought-rep2	GSE10670	Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
26.4	99.7	ArrayExpress	E-MEXP-1443-raw-cel-1581869921	-	-	-
25.2	99.6	GSM269813	WT leaf-drought-rep1	GSE10670	Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
24.0	99.6	GSM269819	C2 leaf-drought-rep1	GSE10670	Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
23.8	99.6	GSM269827	C2 leaf-drought-rep2	GSE10670	Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
23.4	99.6	GSM269825	T8 leaf-drought-rep2	GSE10670	Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
23.1	99.6	GSM184914	Arabidopsis, root cells, cortex, 140 mM NaCl, replicate 2	GSE7641	Expression analysis of root cell-types after treatment with salt
21.9	99.6	ArrayExpress	E-MEXP-1443-raw-cel-1581869688	-	-	-
21.0	99.6	GSM184913	Arabidopsis, root cells, cortex, 140 mM NaCl, replicate 1	GSE7641	Expression analysis of root cell-types after treatment with salt
18.8	99.5	GSM269829	WT leaf-drought-rep3	GSE10670	Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
18.8	99.5	ArrayExpress	E-MEXP-1443-raw-cel-1581869803	-	-	-
18.3	99.5	GSM75517	slr-1 2h NAA replicate 1	GSE3350	SLR/IAA14-dependent auxin induced lateral root initiation
18.0	99.5	GSM269817	T8 leaf-drought-rep1	GSE10670	Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
17.7	99.5	GSM134307	Penfield_1-9_endosperm-PAC_Rep3_ATH1	GSE5751	The early post-germinative embryo and endosperm transcriptomes in Arabidopsis
17.5	99.5	ArrayExpress	E-MEXP-1797-raw-cel-1669768039	-	-	-
16.9	99.5	GSM184916	Arabidopsis, root cells, endodermis and quiescent center, 140 mM NaCl, replicate 1	GSE7641	Expression analysis of root cell-types after treatment with salt
16.4	99.5	ArrayExpress	E-MEXP-1443-raw-cel-1581869745	-	-	-
16.4	99.5	GSM204069	protoplast_hypoxia_rep1	GSE8248	Identification of hypoxia-inducible genes in Arabidopsis mesophyll cells
16.1	99.5	GSM75520	slr-1 2h NAA replicate 2	GSE3350	SLR/IAA14-dependent auxin induced lateral root initiation
15.7	99.5	ArrayExpress	E-MEXP-1443-raw-cel-1581869863	-	-	-
15.7	99.5	GSM269831	T6 leaf-drought-rep3	GSE10670	Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
15.5	99.5	GSM131605	ATGE_41_C	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
15.5	99.5	GSM205156	protoplast_controlDNA_rep1	GSE8257	Identification of KIN10-target genes in Arabidopsis mesophyll cells
15.3	99.4	GSM184911	Arabidopsis, root cells, columella root cap, 140 mM NaCl, replicate 2	GSE7641	Expression analysis of root cell-types after treatment with salt
15.1	99.4	GSM205160	protoplast_controlDNA_rep2	GSE8257	Identification of KIN10-target genes in Arabidopsis mesophyll cells
14.7	99.4	GSM75513	Col-0 2h NAA replicate 2	GSE3350	SLR/IAA14-dependent auxin induced lateral root initiation
14.5	99.4	GSM75512	Col-0 0h NAA replicate 2	GSE3350	SLR/IAA14-dependent auxin induced lateral root initiation
14.4	99.4	ArrayExpress	E-ATMX-35-raw-cel-1574334912	-	-	-
14.0	99.4	GSM270866	Arabidopsis cell culture, 4 h_response to phytoprostane A1_rep1	GSE10719	Response of Arabidopsis cell culture to phytoprostane A1
13.9	99.4	GSM265424	Arabidopsis, root, longitudinal zone 4, standard conditions, rep 1	GSE10497	Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
13.5	99.4	GSM204026	protoplast_control_rep1	GSE8248	Identification of hypoxia-inducible genes in Arabidopsis mesophyll cells
13.5	99.4	GSM205159	protoplast_KIN10_rep1	GSE8257	Identification of KIN10-target genes in Arabidopsis mesophyll cells
13.4	99.4	GSM184931	Arabidopsis, whole roots, 140 mM NaCl, 4 hour, replicate 1	GSE7642	Time course expression analysis of the salt stress response in Arabidopsis roots
13.3	99.4	GSM184918	Arabidopsis, root cells, endodermis and quiescent center, 140 mM NaCl, replicate 3	GSE7641	Expression analysis of root cell-types after treatment with salt
13.3	99.4	ArrayExpress	E-MEXP-1797-raw-cel-1669768084	-	-	-
13.3	99.4	ArrayExpress	E-MEXP-475-raw-cel-680982449	-	-	-
13.1	99.4	ArrayExpress	E-MEXP-546-raw-cel-863289532	-	-	-
13.1	99.4	GSM75509	Col-0 2h NAA replicate 1	GSE3350	SLR/IAA14-dependent auxin induced lateral root initiation
13.0	99.4	ArrayExpress	E-ATMX-30-raw-cel-1513696906	-	-	-
12.9	99.3	GSM184910	Arabidopsis, root cells, columella root cap, 140 mM NaCl, replicate 1	GSE7641	Expression analysis of root cell-types after treatment with salt
12.8	99.3	ArrayExpress	E-MEXP-1443-raw-cel-1581869632	-	-	-
12.6	99.3	GSM131293	AtGen_6-2321_Osmoticstress-Roots-3.0h_Rep1	GSE5622	AtGenExpress: Stress Treatments (Osmotic stress)
12.5	99.3	GSM184917	Arabidopsis, root cells, endodermis and quiescent center, 140 mM NaCl, replicate 2	GSE7641	Expression analysis of root cell-types after treatment with salt
12.0	99.3	GSM131604	ATGE_41_B	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
11.7	99.3	GSM291119	root - 21% oxygen - 48h - A	GSE11558	transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
11.6	99.3	GSM75508	Col-0 0h NAA replicate 1	GSE3350	SLR/IAA14-dependent auxin induced lateral root initiation
11.6	99.3	ArrayExpress	E-ATMX-35-raw-cel-1574334816	-	-	-
11.3	99.3	GSM269833	T8 leaf-drought-rep3	GSE10670	Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
11.2	99.2	ArrayExpress	E-MEXP-546-raw-cel-863289476	-	-	-
11.1	99.2	ArrayExpress	E-ATMX-35-raw-cel-1574334896	-	-	-
11.1	99.2	ArrayExpress	E-MEXP-475-raw-cel-680982503	-	-	-
10.8	99.2	GSM269815	T6 leaf-drought-rep1	GSE10670	Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
10.6	99.2	ArrayExpress	E-MEXP-1797-raw-cel-1669767940	-	-	-
10.6	99.2	GSM265425	Arabidopsis, root, longitudinal zone 4, standard conditions, rep 2	GSE10497	Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
10.5	99.2	GSM184634	Arabidopsis, root cells, 140 mM NaCl, replicate 1	GSE7636	Expression analysis of the effect of protoplasting and FACS sorting in roots
10.3	99.2	GSM205185	protoplast_KIN10_rep2	GSE8257	Identification of KIN10-target genes in Arabidopsis mesophyll cells
10.3	99.2	GSM134304	Penfield_1-6_endosperm-ABA_Rep3_ATH1	GSE5751	The early post-germinative embryo and endosperm transcriptomes in Arabidopsis
10.2	99.2	GSM184915	Arabidopsis, root cells, cortex, 140 mM NaCl, replicate 3	GSE7641	Expression analysis of root cell-types after treatment with salt
10.1	99.2	ArrayExpress	E-MEXP-1797-raw-cel-1669768030	-	-	-
9.9	99.1	GSM131603	ATGE_41_A	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
9.8	99.1	GSM290758	root - 01% oxygen - 48h - A	GSE11558	transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
9.8	99.1	GSM131300	AtGen_6-2512_Osmoticstress-Shoots-12.0h_Rep2	GSE5622	AtGenExpress: Stress Treatments (Osmotic stress)
9.6	99.1	ArrayExpress	E-MEXP-1784-raw-cel-1661573005	-	-	-
9.5	99.1	ArrayExpress	E-MEXP-449-raw-cel-676423306	-	-	-
9.4	99.1	GSM184845	Arabidopsis, root, longitudinal zone 4, standard conditions, NaCl, replicate 1	GSE7639	Expression analysis of root developmental zones after treatment with salt
9.2	99.1	GSM75515	Col-0 6h MOCK replicate 2	GSE3350	SLR/IAA14-dependent auxin induced lateral root initiation
9.2	99.1	GSM184633	Arabidopsis, whole roots, 140 mM NaCl, replicate 2	GSE7636	Expression analysis of the effect of protoplasting and FACS sorting in roots
9.2	99.1	GSM131586	ATGE_34_B	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
8.9	99.0	GSM270868	Arabidopsis cell culture, 4 h_response to phytoprostane A1_rep2	GSE10719	Response of Arabidopsis cell culture to phytoprostane A1
8.9	99.0	GSM134305	Penfield_1-7_endosperm-PAC_Rep1_ATH1	GSE5751	The early post-germinative embryo and endosperm transcriptomes in Arabidopsis
8.8	99.0	GSM75518	slr-1 6h NAA replicate 1	GSE3350	SLR/IAA14-dependent auxin induced lateral root initiation
8.7	99.0	GSM291024	root - 08% oxygen - 48h - A	GSE11558	transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
8.7	99.0	ArrayExpress	E-MEXP-475-raw-cel-680982485	-	-	-
8.7	99.0	GSM184846	Arabidopsis, root, longitudinal zone 4, standard conditions, NaCl, replicate 2	GSE7639	Expression analysis of root developmental zones after treatment with salt
8.6	99.0	GSM131585	ATGE_34_A	GSE5632	AtGenExpress: Developmental series (flowers and pollen)

Back to the CoP portal site

Back to the KAGIANA project homepage