Specifically-expressed experiments

Gene ID	At5g60020
Gene name	LAC17 (laccase 17)
Functional description	putative laccase, a member of laccase family of genes (17 members in Arabidopsis).

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
436.7	100.0	GSM184910	Arabidopsis, root cells, columella root cap, 140 mM NaCl, replicate 1	GSE7641	Expression analysis of root cell-types after treatment with salt
380.3	100.0	GSM133962	Fukuda_1-7_6A_Rep1_ATH1	GSE5748	In vitro tracheary element transdifferentiation of Col-0 suspension cells.
240.6	100.0	GSM133963	Fukuda_1-8_6B_Rep2_ATH1	GSE5748	In vitro tracheary element transdifferentiation of Col-0 suspension cells.
187.4	100.0	GSM184920	Arabidopsis, root cells, stele, 140 mM NaCls, replicate 2	GSE7641	Expression analysis of root cell-types after treatment with salt
169.3	100.0	ArrayExpress	E-MEXP-1451-raw-cel-1585200362	-	-	-
137.6	99.9	GSM184911	Arabidopsis, root cells, columella root cap, 140 mM NaCl, replicate 2	GSE7641	Expression analysis of root cell-types after treatment with salt
135.6	99.9	GSM266666	Arabidopsis, root cells, columella root cap, -Fe, replicate 1	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
131.1	99.9	GSM133964	Fukuda_1-9_8A_Rep1_ATH1	GSE5748	In vitro tracheary element transdifferentiation of Col-0 suspension cells.
118.6	99.9	GSM133965	Fukuda_1-10_8B_Rep2_ATH1	GSE5748	In vitro tracheary element transdifferentiation of Col-0 suspension cells.
105.7	99.9	GSM184919	Arabidopsis, root cells, stele, 140 mM NaCls, replicate 1	GSE7641	Expression analysis of root cell-types after treatment with salt
97.2	99.9	ArrayExpress	E-MEXP-265-raw-cel-414618796	-	-	-
97.2	99.9	GSM184912	Arabidopsis, root cells, columella root cap, 140 mM NaCl, replicate 3	GSE7641	Expression analysis of root cell-types after treatment with salt
95.3	99.9	GSM184894	Arabidopsis, root cells, columella root cap, standard conditions, replicate 3	GSE7641	Expression analysis of root cell-types after treatment with salt
92.2	99.9	ArrayExpress	E-MEXP-265-raw-cel-414618491	-	-	-
90.6	99.9	ArrayExpress	E-MEXP-265-raw-cel-414618394	-	-	-
82.6	99.9	ArrayExpress	E-MEXP-265-raw-cel-414618585	-	-	-
80.1	99.9	ArrayExpress	E-MEXP-1451-raw-cel-1585200330	-	-	-
76.6	99.9	ArrayExpress	E-MEXP-265-raw-cel-414618693	-	-	-
67.7	99.9	GSM184893	Arabidopsis, root cells, columella root cap, standard conditions, replicate 2	GSE7641	Expression analysis of root cell-types after treatment with salt
59.0	99.8	GSM131655	ATGE_27_A	GSE5633	AtGenExpress: Developmental series (shoots and stems)
58.2	99.8	ArrayExpress	E-MEXP-265-raw-cel-414618291	-	-	-
57.1	99.8	ArrayExpress	E-MEXP-1451-raw-cel-1585200298	-	-	-
54.7	99.8	GSM184634	Arabidopsis, root cells, 140 mM NaCl, replicate 1	GSE7636	Expression analysis of the effect of protoplasting and FACS sorting in roots
48.2	99.8	GSM184892	Arabidopsis, root cells, columella root cap, standard conditions, replicate 1	GSE7641	Expression analysis of root cell-types after treatment with salt
48.1	99.8	GSM131656	ATGE_27_B	GSE5633	AtGenExpress: Developmental series (shoots and stems)
47.1	99.8	GSM131657	ATGE_27_C	GSE5633	AtGenExpress: Developmental series (shoots and stems)
42.8	99.8	GSM266668	Arabidopsis, root cells, columella root cap, -Fe, replicate 3	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
41.5	99.8	GSM184921	Arabidopsis, root cells, stele, 140 mM NaCls, replicate 3	GSE7641	Expression analysis of root cell-types after treatment with salt
41.3	99.8	GSM133966	Fukuda_1-11_10A_Rep1_ATH1	GSE5748	In vitro tracheary element transdifferentiation of Col-0 suspension cells.
37.4	99.7	GSM128786	Somerville_1-9_stem-GC8_Rep2_ATH1	GSE5533	Tissue Type Arrays of Columbia-0
34.1	99.7	GSM133961	Fukuda_1-6_4B_Rep2_ATH1	GSE5748	In vitro tracheary element transdifferentiation of Col-0 suspension cells.
31.6	99.7	GSM133967	Fukuda_1-12_10B_Rep2_ATH1	GSE5748	In vitro tracheary element transdifferentiation of Col-0 suspension cells.
27.8	99.7	ArrayExpress	E-MEXP-285-raw-cel-440783213	-	-	-
26.9	99.7	GSM266667	Arabidopsis, root cells, columella root cap, -Fe, replicate 2	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
23.7	99.6	GSM133753	Turner_A-7-Turne-WT-Base1_SLD	GSE5729	Role of COV in vascular patterning
21.6	99.6	GSM133754	Turner_A-8-Turne-WT-Base2_SLD	GSE5729	Role of COV in vascular patterning
21.3	99.6	ArrayExpress	E-MEXP-285-raw-cel-440783152	-	-	-
21.1	99.6	GSM266677	Arabidopsis, root cells, stele, -Fe, replicate 3	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
20.7	99.6	GSM106833	opr3_JA_0.5 hr_Rep1	GSE4733	Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
16.2	99.5	GSM27366	lec1-1 Stem	GSE680	Transcript Profiling of Arabidopsis Plant Life Cycle
16.2	99.5	GSM265416	Arabidopsis, root cells, -Fe, replicate 3	GSE10496	Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe)
16.1	99.5	GSM27362	WT Stem	GSE680	Transcript Profiling of Arabidopsis Plant Life Cycle
15.9	99.5	GSM131593	ATGE_36_C	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
15.0	99.4	GSM143309	Tsu_genomic_hyb_2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
14.3	99.4	GSM143306	High_Na_seg_pool_tsu_col_F2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
14.2	99.4	GSM131591	ATGE_36_A	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
13.7	99.4	GSM131659	ATGE_28_B2	GSE5633	AtGenExpress: Developmental series (shoots and stems)
13.7	99.4	GSM131592	ATGE_36_B	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
13.5	99.4	GSM143300	Ts_genomic_hyb_3	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
13.5	99.4	GSM131660	ATGE_28_C2	GSE5633	AtGenExpress: Developmental series (shoots and stems)
13.4	99.4	GSM128785	Somerville_1-8_stem-GC7_Rep1_ATH1	GSE5533	Tissue Type Arrays of Columbia-0
13.0	99.4	GSM143310	Tsu_genomic_hyb_1	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
12.2	99.3	GSM143307	Low_Na_seg_pool_tsu_col_F2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
12.2	99.3	GSM226542	L12SB	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
12.1	99.3	GSM106919	opr3_OPDA_0.5 hr_Rep1	GSE4733	Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
11.5	99.3	GSM253652	Ler 2	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
11.5	99.3	GSM253651	Ler 1	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
11.4	99.3	GSM143301	Ts_genomic_hyb_2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
10.8	99.2	GSM265430	Arabidopsis, root, longitudinal zone 3, -Fe conditions, rep 1	GSE10497	Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
10.7	99.2	GSM133960	Fukuda_1-5_4A_Rep1_ATH1	GSE5748	In vitro tracheary element transdifferentiation of Col-0 suspension cells.
10.5	99.2	GSM143298	Low_Na_seg_pool_ts_col_F2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
10.5	99.2	GSM253650	Ler 3	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
10.4	99.2	GSM131658	ATGE_28_A2	GSE5633	AtGenExpress: Developmental series (shoots and stems)
10.4	99.2	GSM143299	High_Na_seg_pool_ts_col_F2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
10.0	99.2	GSM133750	Turner_A-4-Turne-Mut-Base2_SLD	GSE5729	Role of COV in vascular patterning
10.0	99.2	GSM253648	Col-0-1	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
9.6	99.1	GSM253649	Col-0-2	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
9.4	99.1	GSM143308	Tsu_genomic_hyb_3	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
9.1	99.1	GSM253647	Col-0 3	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
9.0	99.1	GSM184903	Arabidopsis, root cells, stele, standard conditions, replicate 3	GSE7641	Expression analysis of root cell-types after treatment with salt

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