| Std2 GX | %ile | GSM ID | Assay name | GSE ID | Experiment title | Link to GEO |
| 28.5 | 99.7 | GSM265419 | Arabidopsis, root, longitudinal zone 1, standard conditions, rep 2 | GSE10497 | Expression analysis of root developmental zones after iron deficiency (-Fe) treatment |  |
| 26.5 | 99.7 | GSM265426 | Arabidopsis, root, longitudinal zone 1, -Fe conditions, rep 1 | GSE10497 | Expression analysis of root developmental zones after iron deficiency (-Fe) treatment | |
| 25.1 | 99.6 | GSM265427 | Arabidopsis, root, longitudinal zone 1, -Fe conditions, rep 2 | GSE10497 | Expression analysis of root developmental zones after iron deficiency (-Fe) treatment | |
| 23.6 | 99.6 | GSM133758 | Lindsey_1-11_heart-stage-root_Rep2_ATH1 | GSE5730 | Transcriptional profiling of laser-capture micro-dissected embryonic tissues | |
| 23.0 | 99.6 | GSM133975 | Birnbaum_1-5_StageI-2_Rep2_ATH1 | GSE5749 | A gene expression map of the Arabidopsis root | |
| 22.7 | 99.6 | GSM133974 | Birnbaum_1-4_StageI-1_Rep1_ATH1 | GSE5749 | A gene expression map of the Arabidopsis root | |
| 21.7 | 99.6 | GSM133976 | Birnbaum_1-6_StageI-3_Rep3_ATH1 | GSE5749 | A gene expression map of the Arabidopsis root | |
| 20.2 | 99.6 | GSM265418 | Arabidopsis, root, longitudinal zone 1, standard conditions, rep 1 | GSE10497 | Expression analysis of root developmental zones after iron deficiency (-Fe) treatment | |
| 18.2 | 99.5 | GSM133977 | Birnbaum_1-7_StageI-4_Rep4_ATH1 | GSE5749 | A gene expression map of the Arabidopsis root | |
| 17.7 | 99.5 | ArrayExpress | E-MEXP-849-raw-cel-1181981022 | - | - | - |
| 17.4 | 99.5 | ArrayExpress | E-MEXP-849-raw-cel-1181981030 | - | - | - |
| 17.2 | 99.5 | GSM133771 | Lindsey_1-23_torpedo-apical_Rep5_ATH1 | GSE5730 | Transcriptional profiling of laser-capture micro-dissected embryonic tissues | |
| 17.1 | 99.5 | ArrayExpress | E-MEXP-849-raw-cel-1181981006 | - | - | - |
| 16.7 | 99.5 | GSM134204 | Murray_3-2_D3-GROWTH_Rep1_ATH1 | GSE5750 | Growth of suspension-cultured cells | |
| 15.5 | 99.5 | GSM142906 | WW002_ATH1_A2-willa-ISOX-REP2 | GSE6181 | Assembly of the cell wall pectic matrix. | |
| 15.5 | 99.5 | GSM133815 | Diamond_A-4-Diamo-met_SLD | GSE5735 | Identification of Core Genes Regulating Plant Programmed Cell Death (PCD) | |
| 14.9 | 99.4 | GSM184839 | Arabidopsis, root, longitudinal zone 1, standard conditions, NaCl, replicate 1 | GSE7639 | Expression analysis of root developmental zones after treatment with salt | |
| 14.8 | 99.4 | GSM133120 | RIKEN-YAMAUCHI2B | GSE5687 | AtGenExpress: Different temperature treatment of seeds | |
| 14.8 | 99.4 | GSM133947 | Murray_2-3_T4-APH_Rep1_ATH1 | GSE5747 | Genome-wide cell cycle studies | |
| 14.6 | 99.4 | ArrayExpress | E-MEXP-849-raw-cel-1181981038 | - | - | - |
| 14.3 | 99.4 | ArrayExpress | E-MEXP-849-raw-cel-1181981014 | - | - | - |
| 14.0 | 99.4 | GSM133811 | Diamond_A-4-Diamo-fum_SLD | GSE5735 | Identification of Core Genes Regulating Plant Programmed Cell Death (PCD) | |
| 13.9 | 99.4 | ArrayExpress | E-MEXP-849-raw-cel-1181981046 | - | - | - |
| 13.0 | 99.4 | GSM133119 | RIKEN-YAMAUCHI2A | GSE5687 | AtGenExpress: Different temperature treatment of seeds | |
| 12.9 | 99.3 | GSM142907 | WW002_ATH1_A2-willa-ISOX-REP3 | GSE6181 | Assembly of the cell wall pectic matrix. | |
| 12.9 | 99.3 | GSM133307 | RIKEN-NAKABAYASHI3A | GSE5700 | AtGenExpress: Effect of ABA during seed imbibition | |
| 12.8 | 99.3 | GSM133810 | Diamond_A-3-Diamo-fum_SLD | GSE5735 | Identification of Core Genes Regulating Plant Programmed Cell Death (PCD) | |
| 12.7 | 99.3 | GSM133310 | RIKEN-NAKABAYASHI5B | GSE5700 | AtGenExpress: Effect of ABA during seed imbibition | |
| 12.7 | 99.3 | GSM266663 | Arabidopsis, root cells, epidermis and lateral root cap, -Fe, replicate 2 | GSE10501 | Expression analysis of root cell-types after iron deficiency (-Fe) treatment | |
| 12.5 | 99.3 | GSM131755 | Quick_A28_1-2hr_Rep2_ATH1 | GSE5636 | Systemic signalling of irradiance and CO2 concentration in Arabidopsis (Treatment 1: Ambient CO2 and Ambient Light) | |
| 12.5 | 99.3 | GSM133953 | Murray_2-9_T16-APH_Rep1_ATH1 | GSE5747 | Genome-wide cell cycle studies | |
| 12.4 | 99.3 | GSM75514 | Col-0 6h NAA replicate 2 | GSE3350 | SLR/IAA14-dependent auxin induced lateral root initiation | |
| 12.4 | 99.3 | GSM133948 | Murray_2-4_T6-APH_Rep1_ATH1 | GSE5747 | Genome-wide cell cycle studies | |
| 11.7 | 99.3 | GSM134315 | Penfield_1-17_embryo-PAC_Rep2_ATH1 | GSE5751 | The early post-germinative embryo and endosperm transcriptomes in Arabidopsis | |
| 11.6 | 99.3 | GSM184840 | Arabidopsis, root, longitudinal zone 1, standard conditions, NaCl, replicate 2 | GSE7639 | Expression analysis of root developmental zones after treatment with salt | |
| 11.5 | 99.3 | GSM142734 | DH001_ATH1_A1-UNM1 | GSE6162 | Transcriptome analysis of Arabidopsis microgametogenesis | |
| 11.5 | 99.3 | GSM204026 | protoplast_control_rep1 | GSE8248 | Identification of hypoxia-inducible genes in Arabidopsis mesophyll cells | |
| 11.2 | 99.2 | GSM75510 | Col-0 6h NAA replicate 1 | GSE3350 | SLR/IAA14-dependent auxin induced lateral root initiation | |
| 10.9 | 99.2 | GSM133321 | RIKEN-LI6A | GSE5701 | AtGenExpress: Basic hormone treatment of seeds | |
| 10.7 | 99.2 | GSM184831 | Arabidopsis, root, longitudinal zone 1, standard conditions, replicate 1 | GSE7639 | Expression analysis of root developmental zones after treatment with salt | |
| 10.7 | 99.2 | GSM133308 | RIKEN-NAKABAYASHI4A | GSE5700 | AtGenExpress: Effect of ABA during seed imbibition | |
| 10.6 | 99.2 | GSM142905 | WW002_ATH1_A1-willa-CON-REP3 | GSE6181 | Assembly of the cell wall pectic matrix. | |
| 10.4 | 99.2 | GSM133306 | RIKEN-NAKABAYASHI2B | GSE5700 | AtGenExpress: Effect of ABA during seed imbibition | |
| 10.1 | 99.2 | GSM134314 | Penfield_1-16_embryo-PAC_Rep1_ATH1 | GSE5751 | The early post-germinative embryo and endosperm transcriptomes in Arabidopsis | |
| 10.1 | 99.2 | GSM226544 | Slice2JW | GSE8934 | A high resolution organ expression map reveals novel expression patterns and predicts cellular function | |
| 9.9 | 99.1 | GSM142869 | GW001_ATH1_A14-Warre-3ca | GSE6177 | The effects of the sfr2, sfr3 and sfr6 mutations on lyotropic stress responses | |
| 9.9 | 99.1 | GSM133814 | Diamond_A-3-Diamo-met_SLD | GSE5735 | Identification of Core Genes Regulating Plant Programmed Cell Death (PCD) | |
| 9.8 | 99.1 | GSM134202 | Murray_3-1_D1-GROWTH_Rep1_ATH1 | GSE5750 | Growth of suspension-cultured cells | |
| 9.8 | 99.1 | GSM133813 | Diamond_A-2-Diamo-met_SLD | GSE5735 | Identification of Core Genes Regulating Plant Programmed Cell Death (PCD) | |
| 9.7 | 99.1 | GSM133808 | Diamond_A-1-Diamo-fum_SLD | GSE5735 | Identification of Core Genes Regulating Plant Programmed Cell Death (PCD) | |
| 9.7 | 99.1 | ArrayExpress | E-MEXP-849-raw-cel-1181980998 | - | - | - |
| 9.6 | 99.1 | GSM252664 | Arabidopsis Root from tip to 130 mm proximal to tip (cut 4dpg) rep2 | GSE9996 | Organ regeneration in plants is independent of stem cell niche activity | |
| 9.6 | 99.1 | GSM142866 | GW001_ATH1_A11-Warre-6ca | GSE6177 | The effects of the sfr2, sfr3 and sfr6 mutations on lyotropic stress responses | |
| 9.5 | 99.1 | GSM184832 | Arabidopsis, root, longitudinal zone 1, standard conditions, replicate 2 | GSE7639 | Expression analysis of root developmental zones after treatment with salt | |
| 9.1 | 99.1 | GSM266664 | Arabidopsis, root cells, epidermis and lateral root cap, -Fe, replicate 3 | GSE10501 | Expression analysis of root cell-types after iron deficiency (-Fe) treatment | |
| 9.1 | 99.1 | GSM133951 | Murray_2-7_T12-APH_Rep1_ATH1 | GSE5747 | Genome-wide cell cycle studies | |
| 9.1 | 99.1 | GSM131831 | Quick_A27_0-0hr_Rep2_ATH1 | GSE5639 | Systemic signalling of irradiance and CO2 concentration in Arabidopsis (Controls) | |
| 9.0 | 99.1 | GSM133305 | RIKEN-NAKABAYASHI2A | GSE5700 | AtGenExpress: Effect of ABA during seed imbibition | |
| 8.9 | 99.0 | ArrayExpress | E-ATMX-13-raw-cel-1556149775 | - | - | - |
| 8.8 | 99.0 | ArrayExpress | E-MEXP-1799-raw-cel-1665601214 | - | - | - |
| 8.8 | 99.0 | GSM133309 | RIKEN-NAKABAYASHI4B | GSE5700 | AtGenExpress: Effect of ABA during seed imbibition | |
| 8.7 | 99.0 | GSM184902 | Arabidopsis, root cells, stele, standard conditions, replicate 2 | GSE7641 | Expression analysis of root cell-types after treatment with salt | |
| 8.6 | 99.0 | GSM133812 | Diamond_A-1-Diamo-met_SLD | GSE5735 | Identification of Core Genes Regulating Plant Programmed Cell Death (PCD) | |
