Specifically-expressed experiments

Gene ID At5g57240
Gene name ORP4C (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 4C)
Functional description F:oxysterol binding;P:steroid metabolic process;C:cellular_component unknown;MFOP

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
155.799.9GSM284387Arabidopsis GSUS4bGSE11262Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.Link to GEO
121.299.9ArrayExpressE-NASC-78-raw-cel-1463195219---
120.499.9GSM226272phyAphyB_Dark_replicate3GSE8951A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networksLink to GEO
105.899.9GSM226268WT(Ler)_Dark_replicate2GSE8951A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networksLink to GEO
95.999.9ArrayExpressE-NASC-78-raw-cel-1463195267---
83.299.9GSM282699Col_BRZ_rep3GSE11216Brassinazole treatment of arf2 and wild-type dark-grown seedlingsLink to GEO
72.799.9GSM184551Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
71.099.9ArrayExpressE-NASC-78-raw-cel-1463195235---
70.399.9GSM282698Col_BRZ_rep2GSE11216Brassinazole treatment of arf2 and wild-type dark-grown seedlingsLink to GEO
66.399.8ArrayExpressE-NASC-78-raw-cel-1463195187---
62.099.8GSM319208Dark-grown WT control (vector#1) GSE12729Microarray analysis of MINI ZINC FINGER 1 (MIF1) overexpression transgenic Arabidopsis seedlingsLink to GEO
61.699.8GSM226271phyAphyB_Dark_replicate2GSE8951A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networksLink to GEO
61.599.8GSM284386Arabidopsis GSUS3GSE11262Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.Link to GEO
60.399.8ArrayExpressE-MEXP-1468-raw-cel-1591138985---
58.999.8ArrayExpressE-MEXP-1304-raw-cel-1530618136---
57.199.8GSM226270phyAphyB_Dark_replicate1GSE8951A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networksLink to GEO
56.699.8ArrayExpressE-MEXP-1304-raw-cel-1530618235---
55.599.8GSM282697Col_BRZ_rep1GSE11216Brassinazole treatment of arf2 and wild-type dark-grown seedlingsLink to GEO
55.099.8GSM282703arf2_brz_2GSE11216Brassinazole treatment of arf2 and wild-type dark-grown seedlingsLink to GEO
53.399.8ArrayExpressE-MEXP-1468-raw-cel-1591138688---
52.799.8ArrayExpressE-MEXP-1468-raw-cel-1591138853---
52.399.8GSM282702Col_mock_rep3GSE11216Brassinazole treatment of arf2 and wild-type dark-grown seedlingsLink to GEO
52.099.8ArrayExpressE-MEXP-1304-raw-cel-1530618275---
51.199.8GSM226267WT(Ler)_Dark_replicate1GSE8951A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networksLink to GEO
48.499.8GSM282701Col_mock_rep2GSE11216Brassinazole treatment of arf2 and wild-type dark-grown seedlingsLink to GEO
47.199.8GSM319209Dark-grown WT control (vector#4) GSE12729Microarray analysis of MINI ZINC FINGER 1 (MIF1) overexpression transgenic Arabidopsis seedlingsLink to GEO
46.799.8ArrayExpressE-MEXP-1468-raw-cel-1591139018---
45.799.8GSM134514Col-0_4day_dark_-lincomycin_rep2GSE5759red illumination w/o lincomycinLink to GEO
45.499.8ArrayExpressE-MEXP-1468-raw-cel-1591138886---
44.199.8ArrayExpressE-MEXP-1468-raw-cel-1591138655---
43.999.8GSM226269WT(Ler)_Dark_replicate3GSE8951A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networksLink to GEO
42.299.8GSM134769abi4-102_5day_+lincomycin_rep1GSE5770col0,gun1,abi4-102, w/wo lincomycinLink to GEO
41.799.8ArrayExpressE-MEXP-1304-raw-cel-1530618068---
40.999.8ArrayExpressE-MEXP-1304-raw-cel-1530618171---
40.699.8GSM282700Col_mock_rep1GSE11216Brassinazole treatment of arf2 and wild-type dark-grown seedlingsLink to GEO
39.399.8ArrayExpressE-MEXP-1304-raw-cel-1530618104---
39.099.8GSM282693arf2_brz_1GSE11216Brassinazole treatment of arf2 and wild-type dark-grown seedlingsLink to GEO
36.699.7GSM131190AtGen_D-23_2-UL_REP2_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
35.899.7GSM131215AtGen_D-17_2-DL_REP2_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
33.199.7GSM282696arf2_mock_rep3GSE11216Brassinazole treatment of arf2 and wild-type dark-grown seedlingsLink to GEO
32.599.7GSM282694arf2_mock_rep1GSE11216Brassinazole treatment of arf2 and wild-type dark-grown seedlingsLink to GEO
32.299.7ArrayExpressE-NASC-78-raw-cel-1463195203---
32.199.7ArrayExpressE-MEXP-1304-raw-cel-1530618203---
31.399.7GSM131186AtGen_D-19_2-PL_REP2_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
31.199.7ArrayExpressE-MEXP-1468-raw-cel-1591138919---
30.099.7GSM282695arf2_mock_rep2GSE11216Brassinazole treatment of arf2 and wild-type dark-grown seedlingsLink to GEO
29.799.7ArrayExpressE-NASC-78-raw-cel-1463195171---
28.099.7GSM319210Dark-grown WT control (vector#7) GSE12729Microarray analysis of MINI ZINC FINGER 1 (MIF1) overexpression transgenic Arabidopsis seedlingsLink to GEO
27.399.7GSM131193AtGen_D-27_2-PS_REP2_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
24.399.6GSM133118RIKEN-YAMAUCHI1BGSE5687AtGenExpress: Different temperature treatment of seedsLink to GEO
24.099.6GSM292077Wt, dark sample, biological rep2GSE11594Expression data from dark grown Arabidopsis Wild type (Wt, col-o) and pif1-2 (At2g20810, Salk_072677) mutant seedlingsLink to GEO
23.899.6GSM134771abi4-102_5day_+lincomycin_rep2GSE5770col0,gun1,abi4-102, w/wo lincomycinLink to GEO
23.899.6ArrayExpressE-MEXP-1304-raw-cel-1530617935---
23.599.6GSM131199AtGen_D-33_3-DL_REP3_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
23.499.6GSM134767abi4-102_5day_-lincomycin_rep1GSE5770col0,gun1,abi4-102, w/wo lincomycinLink to GEO
22.599.6ArrayExpressE-MEXP-1468-raw-cel-1591138952---
22.499.6ArrayExpressE-MEXP-1299-raw-cel-1519902994---
22.499.6GSM131179AtGen_D-11_1-PS_REP1_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
22.199.6GSM131169AtGen_D-1_1-DL_REP1_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
21.899.6GSM131174AtGen_D-6_1-AL_REP1_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
21.799.6GSM131177AtGen_D-9_1-DS_REP1_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
21.399.6GSM134768abi4-102_5day_-lincomycin_rep2GSE5770col0,gun1,abi4-102, w/wo lincomycinLink to GEO
21.199.6GSM205430met1-3_leaf_fourth-selfed generation_rep02GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG MethylationLink to GEO
20.699.6GSM226276WT(Ler)_Rc15_replicate1GSE8951A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networksLink to GEO
20.399.6GSM131182AtGen_D-14_1-AS_REP1_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
20.299.6GSM184537Whole roots 2hr KCl control treated then frozen, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
20.099.6GSM131189AtGen_D-22_2-AL_REP2_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
20.099.6ArrayExpressE-MEXP-1468-raw-cel-1591138787---
19.799.6GSM131192AtGen_D-25_2-DS_REP2_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
19.599.6GSM131216AtGen_D-26_1-FS_REP2_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
19.199.6GSM131178AtGen_D-10_1-FS_REP1_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
18.899.5GSM205428met1-3_leaf_fourth-selfed generation_rep01GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG MethylationLink to GEO
18.799.5ArrayExpressE-MEXP-715-raw-cel-1121836247---
18.699.5GSM292076Wt, dark sample, biological rep1GSE11594Expression data from dark grown Arabidopsis Wild type (Wt, col-o) and pif1-2 (At2g20810, Salk_072677) mutant seedlingsLink to GEO
18.699.5GSM131175AtGen_D-7_1-UL_REP1_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
17.999.5GSM131194AtGen_D-28_2-RS_REP2_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
17.999.5GSM226277WT(Ler)_Rc15_replicate2GSE8951A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networksLink to GEO
17.999.5GSM292081pif1-2, dark sample, biological rep3GSE11594Expression data from dark grown Arabidopsis Wild type (Wt, col-o) and pif1-2 (At2g20810, Salk_072677) mutant seedlingsLink to GEO
17.799.5GSM131171AtGen_D-3_1-PL_REP1_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
17.499.5ArrayExpressE-NASC-78-raw-cel-1463195283---
17.399.5GSM134777Col-0_5day_+lincomycin_rep2GSE5770col0,gun1,abi4-102, w/wo lincomycinLink to GEO
17.199.5ArrayExpressE-MEXP-1304-raw-cel-1530617971---
17.199.5ArrayExpressE-MEXP-1304-raw-cel-1530618033---
17.199.5ArrayExpressE-MEXP-715-raw-cel-1121836361---
16.399.5GSM253648Col-0-1GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
16.299.5GSM134782gun1-1_5day_+lincomycin_rep1GSE5770col0,gun1,abi4-102, w/wo lincomycinLink to GEO
15.699.5GSM292080pif1-2, dark sample, biological rep2GSE11594Expression data from dark grown Arabidopsis Wild type (Wt, col-o) and pif1-2 (At2g20810, Salk_072677) mutant seedlingsLink to GEO
15.599.5ArrayExpressE-MEXP-1304-raw-cel-1530618003---
15.599.5GSM245916wild type dark replicate 1GSE9728COP9 signalosome (csn) mutant analysisLink to GEO
15.499.5GSM131183AtGen_D-15_1-US_REP1_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
15.499.5GSM292078Wt, dark sample, biological rep3GSE11594Expression data from dark grown Arabidopsis Wild type (Wt, col-o) and pif1-2 (At2g20810, Salk_072677) mutant seedlingsLink to GEO
15.199.4GSM226278WT(Ler)_Rc50_replicate1GSE8951A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networksLink to GEO
15.099.4GSM131207AtGen_D-41_3-DS_REP3_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
14.799.4GSM253646Low_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
14.799.4GSM253649Col-0-2GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
14.699.4GSM292079pif1-2, dark sample, biological rep1GSE11594Expression data from dark grown Arabidopsis Wild type (Wt, col-o) and pif1-2 (At2g20810, Salk_072677) mutant seedlingsLink to GEO
14.599.4ArrayExpressE-MEXP-1299-raw-cel-1519903848---
14.399.4GSM253650Ler 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
14.299.4GSM134775Col-0_5day_+lincomycin_rep1GSE5770col0,gun1,abi4-102, w/wo lincomycinLink to GEO
14.099.4GSM253651Ler 1GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
13.699.4GSM131198AtGen_D-32_2-WS_REP2_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
13.599.4ArrayExpressE-MEXP-715-raw-cel-1121836334---
13.499.4ArrayExpressE-MEXP-475-raw-cel-680982521---
13.399.4GSM253652Ler 2GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
13.299.4GSM143300Ts_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
12.999.3GSM131210AtGen_D-44_3-RS_REP3_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
12.899.3ArrayExpressE-MEXP-1468-raw-cel-1591138754---
12.899.3ArrayExpressE-MEXP-475-raw-cel-680982485---
12.399.3GSM131208AtGen_D-42_3-FS_REP3_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
12.299.3GSM131180AtGen_D-12_1-RS_REP1_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
12.099.3GSM131184AtGen_D-16_1-WS_REP1_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
11.899.3GSM205435Col_ leaf_ wildtype_rep02GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG MethylationLink to GEO
11.899.3GSM131209AtGen_D-43_3-PS_REP3_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
11.499.3GSM131213AtGen_D-47_3-US_REP3_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
11.399.3GSM226281YHB_Rc50_replicate2GSE8951A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networksLink to GEO
11.199.2GSM131205AtGen_D-39_3-UL_REP3_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
10.699.2GSM131197AtGen_D-31_2-US_REP2_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
10.699.2GSM245918wild type dark replicate 3GSE9728COP9 signalosome (csn) mutant analysisLink to GEO
10.399.2GSM143307Low_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
10.399.2GSM143302Ts_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
10.399.2GSM253647Col-0 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
9.899.1GSM143298Low_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
9.799.1GSM226279WT(Ler)_Rc50_replicate2GSE8951A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networksLink to GEO
9.799.1ArrayExpressE-MEXP-1468-raw-cel-1591138721---
9.699.1GSM143308Tsu_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
9.599.1GSM143310Tsu_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
9.399.1GSM143299High_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
8.999.0GSM131196AtGen_D-30_2-AS_REP2_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
8.799.0GSM143309Tsu_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
8.699.0GSM133724McCormac_1-2_wildtype-Contrl_Rep1_ATH1GSE5726Seedling transcriptome affected by Norflurazon-induced photobleaching of chloroplastsLink to GEO



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