| Std2 GX | %ile | GSM ID | Assay name | GSE ID | Experiment title | Link to GEO |
| 203.6 | 100.0 | GSM284385 | Arabidopsis GEP6 | GSE11262 | Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage. |  |
| 69.4 | 99.9 | GSM311274 | Laser capture microdissected (LCM) embryo proper at the pre-globular stage, biological replicate 2 | GSE12402 | Expression data from Arabidopsis seed compartments at the pre-globular stage | |
| 68.9 | 99.9 | GSM311273 | Laser capture microdissected (LCM) embryo proper at the pre-globular stage, biological replicate 1 | GSE12402 | Expression data from Arabidopsis seed compartments at the pre-globular stage | |
| 49.3 | 99.8 | GSM311288 | Laser capture microdissected (LCM) embryo proper at the linear-cotyledon stage, biological replicate 2 | GSE12403 | Expression data from Arabidopsis seed compartments at the linear-cotyledon stage | |
| 47.4 | 99.8 | GSM284384 | Arabidopsis GEP5 | GSE11262 | Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage. | |
| 38.5 | 99.8 | GSM311292 | Laser capture microdissected (LCM) chalazal endosperm at the linear-cotyledon stage, biological replicate 2 | GSE12403 | Expression data from Arabidopsis seed compartments at the linear-cotyledon stage | |
| 29.6 | 99.7 | GSM133975 | Birnbaum_1-5_StageI-2_Rep2_ATH1 | GSE5749 | A gene expression map of the Arabidopsis root | |
| 27.3 | 99.7 | GSM184537 | Whole roots 2hr KCl control treated then frozen, biological rep1 | GSE7631 | Cell-specific nitrogen responses in the Arabidopsis root | |
| 26.1 | 99.7 | GSM142905 | WW002_ATH1_A1-willa-CON-REP3 | GSE6181 | Assembly of the cell wall pectic matrix. | |
| 22.9 | 99.6 | GSM133120 | RIKEN-YAMAUCHI2B | GSE5687 | AtGenExpress: Different temperature treatment of seeds | |
| 22.5 | 99.6 | GSM226530 | LCOLUMELLASB | GSE8934 | A high resolution organ expression map reveals novel expression patterns and predicts cellular function | |
| 20.1 | 99.6 | GSM265426 | Arabidopsis, root, longitudinal zone 1, -Fe conditions, rep 1 | GSE10497 | Expression analysis of root developmental zones after iron deficiency (-Fe) treatment | |
| 20.1 | 99.6 | GSM311281 | Laser capture microdissected (LCM) chalazal seed coat at the pre-globular stage, biological replicate 1 | GSE12402 | Expression data from Arabidopsis seed compartments at the pre-globular stage | |
| 18.7 | 99.5 | GSM311282 | Laser capture microdissected (LCM) chalazal seed coat at the pre-globular stage, biological replicate 2 | GSE12402 | Expression data from Arabidopsis seed compartments at the pre-globular stage | |
| 18.7 | 99.5 | GSM284391 | Arabidopsis GPE3 | GSE11262 | Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage. | |
| 18.0 | 99.5 | GSM311287 | Laser capture microdissected (LCM) embryo proper at the linear-cotyledon stage, biological replicate 1 | GSE12403 | Expression data from Arabidopsis seed compartments at the linear-cotyledon stage | |
| 17.0 | 99.5 | GSM133947 | Murray_2-3_T4-APH_Rep1_ATH1 | GSE5747 | Genome-wide cell cycle studies | |
| 16.3 | 99.5 | GSM184551 | Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep1 | GSE7631 | Cell-specific nitrogen responses in the Arabidopsis root | |
| 15.9 | 99.5 | GSM134202 | Murray_3-1_D1-GROWTH_Rep1_ATH1 | GSE5750 | Growth of suspension-cultured cells | |
| 15.0 | 99.4 | GSM184556 | Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2 | GSE7631 | Cell-specific nitrogen responses in the Arabidopsis root | |
| 14.5 | 99.4 | ArrayExpress | E-MEXP-849-raw-cel-1181981030 | - | - | - |
| 14.2 | 99.4 | GSM133948 | Murray_2-4_T6-APH_Rep1_ATH1 | GSE5747 | Genome-wide cell cycle studies | |
| 13.8 | 99.4 | GSM311291 | Laser capture microdissected (LCM) chalazal endosperm at the linear-cotyledon stage, biological replicate 1 | GSE12403 | Expression data from Arabidopsis seed compartments at the linear-cotyledon stage | |
| 13.2 | 99.4 | GSM253646 | Low_Mo_seg_pool_Ler_col_F2 | GSE10039 | Low_Mo_Arabidopsis_mapping_MOT1 | |
| 13.1 | 99.4 | ArrayExpress | E-MEXP-849-raw-cel-1181981046 | - | - | - |
| 13.0 | 99.4 | GSM142906 | WW002_ATH1_A2-willa-ISOX-REP2 | GSE6181 | Assembly of the cell wall pectic matrix. | |
| 12.9 | 99.3 | GSM133951 | Murray_2-7_T12-APH_Rep1_ATH1 | GSE5747 | Genome-wide cell cycle studies | |
| 12.8 | 99.3 | GSM133953 | Murray_2-9_T16-APH_Rep1_ATH1 | GSE5747 | Genome-wide cell cycle studies | |
| 12.7 | 99.3 | GSM265419 | Arabidopsis, root, longitudinal zone 1, standard conditions, rep 2 | GSE10497 | Expression analysis of root developmental zones after iron deficiency (-Fe) treatment | |
| 12.7 | 99.3 | GSM133950 | Murray_2-6_T10-APH_Rep1_ATH1 | GSE5747 | Genome-wide cell cycle studies | |
| 12.6 | 99.3 | GSM143310 | Tsu_genomic_hyb_1 | GSE6203 | Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1 | |
| 12.6 | 99.3 | GSM133952 | Murray_2-8_T14-APH_Rep1_ATH1 | GSE5747 | Genome-wide cell cycle studies | |
| 12.5 | 99.3 | GSM143308 | Tsu_genomic_hyb_3 | GSE6203 | Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1 | |
| 12.5 | 99.3 | GSM142599 | BD001_ATH1_A3-DAVIE-T13 | GSE6149 | Targets of the mci genes. | |
| 12.0 | 99.3 | GSM134204 | Murray_3-2_D3-GROWTH_Rep1_ATH1 | GSE5750 | Growth of suspension-cultured cells | |
| 11.9 | 99.3 | ArrayExpress | E-MEXP-849-raw-cel-1181981006 | - | - | - |
| 11.7 | 99.3 | GSM205435 | Col_ leaf_ wildtype_rep02 | GSE8279 | Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation | |
| 11.7 | 99.3 | GSM142602 | BD001_ATH1_A6-DAVIE-T14 | GSE6149 | Targets of the mci genes. | |
| 11.3 | 99.3 | GSM265418 | Arabidopsis, root, longitudinal zone 1, standard conditions, rep 1 | GSE10497 | Expression analysis of root developmental zones after iron deficiency (-Fe) treatment | |
| 11.3 | 99.3 | GSM142597 | BD001_ATH1_A1-DAVIE-CON | GSE6149 | Targets of the mci genes. | |
| 11.0 | 99.2 | GSM142907 | WW002_ATH1_A2-willa-ISOX-REP3 | GSE6181 | Assembly of the cell wall pectic matrix. | |
| 10.7 | 99.2 | GSM133781 | Lindsey_1-6_globular-basal_Rep3_ATH1 | GSE5730 | Transcriptional profiling of laser-capture micro-dissected embryonic tissues | |
| 10.3 | 99.2 | GSM133321 | RIKEN-LI6A | GSE5701 | AtGenExpress: Basic hormone treatment of seeds | |
| 10.1 | 99.2 | GSM133976 | Birnbaum_1-6_StageI-3_Rep3_ATH1 | GSE5749 | A gene expression map of the Arabidopsis root | |
| 10.1 | 99.2 | GSM133974 | Birnbaum_1-4_StageI-1_Rep1_ATH1 | GSE5749 | A gene expression map of the Arabidopsis root | |
| 10.0 | 99.2 | GSM142866 | GW001_ATH1_A11-Warre-6ca | GSE6177 | The effects of the sfr2, sfr3 and sfr6 mutations on lyotropic stress responses | |
| 9.9 | 99.1 | GSM143299 | High_Na_seg_pool_ts_col_F2 | GSE6203 | Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1 | |
| 9.8 | 99.1 | GSM142902 | WW001_ATH1_A1-WILLA-CON | GSE6181 | Assembly of the cell wall pectic matrix. | |
| 9.8 | 99.1 | GSM142869 | GW001_ATH1_A14-Warre-3ca | GSE6177 | The effects of the sfr2, sfr3 and sfr6 mutations on lyotropic stress responses | |
| 9.8 | 99.1 | GSM143307 | Low_Na_seg_pool_tsu_col_F2 | GSE6203 | Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1 | |
| 9.6 | 99.1 | GSM284390 | Arabidopsis GPE2 | GSE11262 | Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage. | |
| 9.5 | 99.1 | GSM184832 | Arabidopsis, root, longitudinal zone 1, standard conditions, replicate 2 | GSE7639 | Expression analysis of root developmental zones after treatment with salt | |
| 9.5 | 99.1 | GSM142598 | BD001_ATH1_A2-DAVIE-CON | GSE6149 | Targets of the mci genes. | |
| 9.4 | 99.1 | GSM143309 | Tsu_genomic_hyb_2 | GSE6203 | Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1 | |
| 9.4 | 99.1 | ArrayExpress | E-MEXP-849-raw-cel-1181981014 | - | - | - |
| 9.4 | 99.1 | GSM133318 | RIKEN-LI4B | GSE5701 | AtGenExpress: Basic hormone treatment of seeds | |
| 9.2 | 99.1 | GSM133307 | RIKEN-NAKABAYASHI3A | GSE5700 | AtGenExpress: Effect of ABA during seed imbibition | |
| 9.2 | 99.1 | GSM184831 | Arabidopsis, root, longitudinal zone 1, standard conditions, replicate 1 | GSE7639 | Expression analysis of root developmental zones after treatment with salt | |
| 9.1 | 99.1 | GSM143302 | Ts_genomic_hyb_1 | GSE6203 | Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1 | |
| 9.0 | 99.1 | GSM131683 | ATGE_52_B | GSE5633 | AtGenExpress: Developmental series (shoots and stems) | |
| 8.8 | 99.0 | GSM133774 | Lindsey_1-26_torpedo-meristem_Rep2_ATH1 | GSE5730 | Transcriptional profiling of laser-capture micro-dissected embryonic tissues | |
| 8.8 | 99.0 | GSM284395 | Arabidopsis GPSc1 | GSE11262 | Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage. | |
| 8.8 | 99.0 | GSM142601 | BD001_ATH1_A5-DAVIE-T14 | GSE6149 | Targets of the mci genes. | |
| 8.8 | 99.0 | GSM142647 | MC002_ATH1_A9.1-dubos-aah | GSE6151 | The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis | |
