Specifically-expressed experiments

Gene ID At5g54190
Gene name PORA
Functional description light-dependent NADPH:protochlorophyllide oxidoreductase A

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
240.1100.0GSM226270phyAphyB_Dark_replicate1GSE8951A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networksLink to GEO
153.399.9GSM226271phyAphyB_Dark_replicate2GSE8951A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networksLink to GEO
149.399.9GSM226267WT(Ler)_Dark_replicate1GSE8951A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networksLink to GEO
149.199.9GSM226269WT(Ler)_Dark_replicate3GSE8951A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networksLink to GEO
148.699.9GSM226272phyAphyB_Dark_replicate3GSE8951A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networksLink to GEO
144.799.9ArrayExpressE-MEXP-1304-raw-cel-1530618104---
139.999.9GSM226268WT(Ler)_Dark_replicate2GSE8951A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networksLink to GEO
136.599.9ArrayExpressE-MEXP-1304-raw-cel-1530618033---
135.099.9ArrayExpressE-NASC-78-raw-cel-1463195219---
132.999.9ArrayExpressE-NASC-78-raw-cel-1463195267---
130.599.9ArrayExpressE-MEXP-1304-raw-cel-1530617935---
124.799.9ArrayExpressE-MEXP-1304-raw-cel-1530617971---
116.299.9ArrayExpressE-MEXP-1304-raw-cel-1530618068---
111.399.9GSM133118RIKEN-YAMAUCHI1BGSE5687AtGenExpress: Different temperature treatment of seedsLink to GEO
104.299.9ArrayExpressE-MEXP-1304-raw-cel-1530618136---
99.299.9ArrayExpressE-MEXP-1304-raw-cel-1530618275---
91.399.9ArrayExpressE-MEXP-1304-raw-cel-1530618003---
89.199.9ArrayExpressE-NASC-78-raw-cel-1463195187---
85.099.9ArrayExpressE-MEXP-1304-raw-cel-1530618171---
78.599.9ArrayExpressE-MEXP-1468-raw-cel-1591138754---
71.199.9GSM282703arf2_brz_2GSE11216Brassinazole treatment of arf2 and wild-type dark-grown seedlingsLink to GEO
70.899.9GSM292077Wt, dark sample, biological rep2GSE11594Expression data from dark grown Arabidopsis Wild type (Wt, col-o) and pif1-2 (At2g20810, Salk_072677) mutant seedlingsLink to GEO
68.699.9ArrayExpressE-MEXP-1304-raw-cel-1530617900---
64.699.8GSM134513Col-0_4day_dark_-lincomycin_rep1GSE5759red illumination w/o lincomycinLink to GEO
62.699.8ArrayExpressE-MEXP-1304-raw-cel-1530618235---
59.299.8GSM282697Col_BRZ_rep1GSE11216Brassinazole treatment of arf2 and wild-type dark-grown seedlingsLink to GEO
54.699.8ArrayExpressE-MEXP-1784-raw-cel-1661572952---
53.399.8ArrayExpressE-MEXP-1784-raw-cel-1661572978---
52.499.8ArrayExpressE-MEXP-1468-raw-cel-1591138721---
51.999.8ArrayExpressE-MEXP-1784-raw-cel-1661572965---
51.499.8GSM282699Col_BRZ_rep3GSE11216Brassinazole treatment of arf2 and wild-type dark-grown seedlingsLink to GEO
50.499.8ArrayExpressE-MEXP-1468-raw-cel-1591138688---
48.799.8ArrayExpressE-MEXP-1304-raw-cel-1530618203---
48.199.8ArrayExpressE-NASC-78-raw-cel-1463195235---
47.099.8ArrayExpressE-MEXP-1468-raw-cel-1591138985---
46.799.8GSM282694arf2_mock_rep1GSE11216Brassinazole treatment of arf2 and wild-type dark-grown seedlingsLink to GEO
46.099.8ArrayExpressE-MEXP-1468-raw-cel-1591139018---
45.699.8GSM134514Col-0_4day_dark_-lincomycin_rep2GSE5759red illumination w/o lincomycinLink to GEO
44.899.8GSM282698Col_BRZ_rep2GSE11216Brassinazole treatment of arf2 and wild-type dark-grown seedlingsLink to GEO
43.899.8ArrayExpressE-MEXP-1468-raw-cel-1591138655---
43.799.8GSM282696arf2_mock_rep3GSE11216Brassinazole treatment of arf2 and wild-type dark-grown seedlingsLink to GEO
42.699.8GSM134517Col-0_4day_red illumination_-lincomycin_rep1GSE5759red illumination w/o lincomycinLink to GEO
42.199.8ArrayExpressE-MEXP-1784-raw-cel-1661573117---
42.099.8GSM282700Col_mock_rep1GSE11216Brassinazole treatment of arf2 and wild-type dark-grown seedlingsLink to GEO
40.599.8GSM282695arf2_mock_rep2GSE11216Brassinazole treatment of arf2 and wild-type dark-grown seedlingsLink to GEO
39.799.8GSM292078Wt, dark sample, biological rep3GSE11594Expression data from dark grown Arabidopsis Wild type (Wt, col-o) and pif1-2 (At2g20810, Salk_072677) mutant seedlingsLink to GEO
37.199.7GSM292076Wt, dark sample, biological rep1GSE11594Expression data from dark grown Arabidopsis Wild type (Wt, col-o) and pif1-2 (At2g20810, Salk_072677) mutant seedlingsLink to GEO
35.999.7GSM134518Col-0_4day_red illumination_-lincomycin_rep2GSE5759red illumination w/o lincomycinLink to GEO
35.999.7GSM134515Col-0_4day_dark_+lincomycin_rep1GSE5759red illumination w/o lincomycinLink to GEO
35.399.7GSM282702Col_mock_rep3GSE11216Brassinazole treatment of arf2 and wild-type dark-grown seedlingsLink to GEO
35.299.7GSM282701Col_mock_rep2GSE11216Brassinazole treatment of arf2 and wild-type dark-grown seedlingsLink to GEO
30.999.7ArrayExpressE-MEXP-1784-raw-cel-1661573160---
30.699.7GSM282693arf2_brz_1GSE11216Brassinazole treatment of arf2 and wild-type dark-grown seedlingsLink to GEO
27.899.7ArrayExpressE-MEXP-1784-raw-cel-1661573138---
27.399.7GSM131189AtGen_D-22_2-AL_REP2_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
21.599.6GSM319208Dark-grown WT control (vector#1) GSE12729Microarray analysis of MINI ZINC FINGER 1 (MIF1) overexpression transgenic Arabidopsis seedlingsLink to GEO
20.899.6ArrayExpressE-MEXP-1784-raw-cel-1661573096---
19.299.6ArrayExpressE-NASC-78-raw-cel-1463195203---
18.899.5ArrayExpressE-MEXP-1784-raw-cel-1661573173---
18.699.5ArrayExpressE-MEXP-1784-raw-cel-1661572909---
17.399.5GSM131190AtGen_D-23_2-UL_REP2_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
17.099.5GSM134516Col-0_4day_dark_+lincomycin_rep2GSE5759red illumination w/o lincomycinLink to GEO
16.399.5ArrayExpressE-NASC-78-raw-cel-1463195171---
15.799.5GSM134520Col-0_4day_red illumination _+lincomycin_rep2GSE5759red illumination w/o lincomycinLink to GEO
15.199.4GSM319209Dark-grown WT control (vector#4) GSE12729Microarray analysis of MINI ZINC FINGER 1 (MIF1) overexpression transgenic Arabidopsis seedlingsLink to GEO
14.999.4ArrayExpressE-MEXP-1784-raw-cel-1661573186---
14.599.4ArrayExpressE-NASC-78-raw-cel-1463195251---
14.099.4GSM131216AtGen_D-26_1-FS_REP2_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
13.899.4ArrayExpressE-MEXP-1468-raw-cel-1591138853---
13.399.4GSM142880GW001_ATH1_A25-Warre-24fGSE6177The effects of the sfr2, sfr3 and sfr6 mutations on lyotropic stress responsesLink to GEO
12.699.3ArrayExpressE-MEXP-1112-raw-cel-1590665481---
12.699.3GSM292080pif1-2, dark sample, biological rep2GSE11594Expression data from dark grown Arabidopsis Wild type (Wt, col-o) and pif1-2 (At2g20810, Salk_072677) mutant seedlingsLink to GEO
11.399.3GSM131169AtGen_D-1_1-DL_REP1_ATH1GSE5617AtGenExpress: Light treatmentsLink to GEO
10.999.2ArrayExpressE-MEXP-1784-raw-cel-1661573005---
10.599.2ArrayExpressE-MEXP-1468-raw-cel-1591138886---
10.299.2ArrayExpressE-MEXP-148-raw-cel-350529179---
10.099.2ArrayExpressE-NASC-78-raw-cel-1463195283---
9.999.1ArrayExpressE-MEXP-148-raw-cel-350529268---
9.899.1GSM159300CCA1-34_dark_early_rep1GSE6906Rhythmic growth explained by coincidence between internal and external cuesLink to GEO
9.899.1ArrayExpressE-MEXP-1112-raw-cel-1590665533---
9.699.1ArrayExpressE-MEXP-1784-raw-cel-1661572888---
9.399.1GSM128714Thorlby_1-3_24h-post-freeze_REP3_ATH1GSE5524Gene Expression During Recovery from FreezingLink to GEO
9.299.1GSM292079pif1-2, dark sample, biological rep1GSE11594Expression data from dark grown Arabidopsis Wild type (Wt, col-o) and pif1-2 (At2g20810, Salk_072677) mutant seedlingsLink to GEO
8.899.0GSM226276WT(Ler)_Rc15_replicate1GSE8951A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networksLink to GEO



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