Specifically-expressed experiments

Gene ID At5g54020
Gene name zinc ion binding
Functional description F:zinc ion binding;P:intracellular signaling cascade;C:intracellular;PMOF

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
342.4100.0GSM205426met1-3_leaf_second-selfed generation_rep02GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG MethylationLink to GEO
221.1100.0GSM205430met1-3_leaf_fourth-selfed generation_rep02GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG MethylationLink to GEO
145.299.9GSM205428met1-3_leaf_fourth-selfed generation_rep01GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG MethylationLink to GEO
119.099.9GSM205364met1-3_leaf_second-selfed generation_rep01GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG MethylationLink to GEO
91.399.9GSM184516Pericycle root cells 2hr continuous KCl and MSX control treated, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
83.899.9GSM226549Slice7JWGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular functionLink to GEO
75.099.9GSM184844Arabidopsis, root, longitudinal zone 3, standard conditions, NaCl, replicate 2GSE7639Expression analysis of root developmental zones after treatment with saltLink to GEO
68.699.9GSM265423Arabidopsis, root, longitudinal zone 3, standard conditions, rep 2GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatmentLink to GEO
67.399.8GSM133985Birnbaum_1-15_StageIII-4_Rep4_ATH1GSE5749A gene expression map of the Arabidopsis rootLink to GEO
67.399.8GSM184836Arabidopsis, root, longitudinal zone 3, standard conditions, replicate 6GSE7639Expression analysis of root developmental zones after treatment with saltLink to GEO
65.599.8GSM184520Pericycle root cells 2hr continuous KNO3 and MSX treated, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
61.099.8GSM184835Arabidopsis, root, longitudinal zone 3, standard conditions, replicate 5GSE7639Expression analysis of root developmental zones after treatment with saltLink to GEO
58.899.8GSM205435Col_ leaf_ wildtype_rep02GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG MethylationLink to GEO
58.799.8GSM184843Arabidopsis, root, longitudinal zone 3, standard conditions, NaCl, replicate 1GSE7639Expression analysis of root developmental zones after treatment with saltLink to GEO
49.999.8GSM184487Epidermis&Cortex root cells 2hr KCl control treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
45.899.8GSM133983Birnbaum_1-13_StageIII-2_Rep2_ATH1GSE5749A gene expression map of the Arabidopsis rootLink to GEO
45.299.8GSM133762Lindsey_1-14_torpedo-root_Rep1_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissuesLink to GEO
45.199.8GSM226530LCOLUMELLASBGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular functionLink to GEO
43.499.8GSM184521Pericycle root cells 2hr continuous KNO3 and MSX treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
37.499.7GSM253648Col-0-1GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
37.299.7GSM265430Arabidopsis, root, longitudinal zone 3, -Fe conditions, rep 1GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatmentLink to GEO
36.999.7GSM253649Col-0-2GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
36.599.7GSM184490Epidermis&Cortex root cells 2hr transitory KNO3 treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
34.799.7GSM253647Col-0 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
34.199.7GSM184517Pericycle root cells 2hr continuous KCl and MSX control treated, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
33.699.7GSM184488Epidermis&Cortex root cells 2hr transitory KNO3 treated, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
33.599.7GSM265422Arabidopsis, root, longitudinal zone 3, standard conditions, rep1GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatmentLink to GEO
33.299.7GSM226538L8SBGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular functionLink to GEO
33.199.7GSM133984Birnbaum_1-14_StageIII-3_Rep3_ATH1GSE5749A gene expression map of the Arabidopsis rootLink to GEO
33.199.7GSM253646Low_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
32.099.7GSM184931Arabidopsis, whole roots, 140 mM NaCl, 4 hour, replicate 1GSE7642Time course expression analysis of the salt stress response in Arabidopsis rootsLink to GEO
31.599.7GSM265431Arabidopsis, root, longitudinal zone 3, -Fe conditions, rep 2GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatmentLink to GEO
31.399.7GSM184518Pericycle root cells 2hr continuous KCl and MSX control treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
30.999.7GSM184477Lateral Root Cap root cells 2hr KCl control treated, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
29.399.7GSM184493Epidermis&Cortex root cells 2hr continuous KNO3 treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
27.599.7GSM184845Arabidopsis, root, longitudinal zone 4, standard conditions, NaCl, replicate 1GSE7639Expression analysis of root developmental zones after treatment with saltLink to GEO
26.199.7GSM184507Pericycle root cells 2hr transitory KNO3 treated, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
25.799.7GSM184846Arabidopsis, root, longitudinal zone 4, standard conditions, NaCl, replicate 2GSE7639Expression analysis of root developmental zones after treatment with saltLink to GEO
25.499.6GSM184479Lateral Root Cap root cells 2hr transitory KNO3 treated, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
24.799.6GSM253645High_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
24.699.6GSM184932Arabidopsis, whole roots, 140 mM NaCl, 4 hour, replicate 2GSE7642Time course expression analysis of the salt stress response in Arabidopsis rootsLink to GEO
24.299.6GSM143299High_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
23.599.6GSM184838Arabidopsis, root, longitudinal zone 4, standard conditions, replicate 8GSE7639Expression analysis of root developmental zones after treatment with saltLink to GEO
23.299.6GSM184510Pericycle root cells 2hr continuous KNO3 treated, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
23.299.6GSM184504Pericycle root cells 2hr KCl control treated, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
22.899.6GSM184505Pericycle root cells 2hr KCl control treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
22.499.6GSM143298Low_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
22.099.6GSM184485Epidermis&Cortex root cells 2hr KCl control treated, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
20.899.6GSM142750MJ001_ATH1_A1-jones-WT1GSE6165The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.Link to GEO
20.499.6GSM218585Pericycle root cells 2hr continuous KNO3 and MSX and Gln treated, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
20.199.6GSM218590Protoplasted root cells 2hr transitory KNO3 treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
20.099.6GSM184519Pericycle root cells 2hr continuous KNO3 and MSX treated, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
19.499.6GSM184936Arabidopsis, whole roots, 140 mM NaCl, 32 hour, replicate 2GSE7642Time course expression analysis of the salt stress response in Arabidopsis rootsLink to GEO
19.299.6GSM143307Low_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
18.599.5GSM184486Epidermis&Cortex root cells 2hr KCl control treated, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
18.199.5GSM184934Arabidopsis, whole roots, 140 mM NaCl, 16 hour, replicate 2GSE7642Time course expression analysis of the salt stress response in Arabidopsis rootsLink to GEO
17.899.5GSM184933Arabidopsis, whole roots, 140 mM NaCl, 16 hour, replicate 1GSE7642Time course expression analysis of the salt stress response in Arabidopsis rootsLink to GEO
17.499.5GSM184491Epidermis&Cortex root cells 2hr continuous KNO3 treated, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
17.199.5GSM205432Col_ leaf_ wildtype_rep01GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG MethylationLink to GEO
16.499.5GSM184492Epidermis&Cortex root cells 2hr continuous KNO3 treated, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
16.499.5GSM184481Lateral Root Cap root cells 2hr transitory KNO3 treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
16.399.5GSM184489Epidermis&Cortex root cells 2hr transitory KNO3 treated, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
15.999.5GSM265413Arabidopsis, whole roots, -Fe, replicate 3GSE10496Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe)Link to GEO
15.899.5GSM184837Arabidopsis, root, longitudinal zone 4, standard conditions, replicate 7GSE7639Expression analysis of root developmental zones after treatment with saltLink to GEO
15.699.5GSM184552Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
15.299.4GSM184895Arabidopsis, root cells, cortex, standard conditions, replicate 1GSE7641Expression analysis of root cell-types after treatment with saltLink to GEO
15.099.4GSM226537L7SBGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular functionLink to GEO
14.899.4GSM184935Arabidopsis, whole roots, 140 mM NaCl, 32 hour, replicate 1GSE7642Time course expression analysis of the salt stress response in Arabidopsis rootsLink to GEO
14.799.4GSM142751MJ001_ATH1_A2-jones-WT2GSE6165The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.Link to GEO
14.599.4GSM218588Protoplasted root cells 2hr transitory KNO3 treated, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
14.499.4GSM226539L9SBGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular functionLink to GEO
13.999.4GSM266670Arabidopsis, root cells, cortex, -Fe, replicate 2GSE10501Expression analysis of root cell-types after iron deficiency (-Fe) treatmentLink to GEO
13.699.4GSM184480Lateral Root Cap root cells 2hr transitory KNO3 treated, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
13.699.4GSM226548Slice6JWGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular functionLink to GEO
13.299.4GSM184497Endodermis&Pericycle root cells 2hr transitory KNO3 treated, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
12.999.3GSM184508Pericycle root cells 2hr transitory KNO3 treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
12.699.3GSM184506Pericycle root cells 2hr transitory KNO3 treated, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
12.699.3GSM184918Arabidopsis, root cells, endodermis and quiescent center, 140 mM NaCl, replicate 3GSE7641Expression analysis of root cell-types after treatment with saltLink to GEO
12.699.3GSM184533Protoplasted root cells 2hr KCl control treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
12.499.3GSM131273AtGen_6-1421_Cold(4°C)-Roots-6.0h_Rep1GSE5621AtGenExpress: Stress Treatments (Cold stress)Link to GEO
12.199.3GSM184496Endodermis&Pericycle root cells 2hr KCl control treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
12.099.3GSM266665Arabidopsis, root cells, epidermis and lateral root cap, -Fe, replicate 4GSE10501Expression analysis of root cell-types after iron deficiency (-Fe) treatmentLink to GEO
12.099.3GSM260883Yap_A2-AMF_Rep2GSE10323Testing Arabidopsis for the presence of arbuscular mycorrhizal signalling pathwaysLink to GEO
12.099.3GSM131266AtGen_6-1222_Cold(4°C)-Roots-1.0h_Rep2GSE5621AtGenExpress: Stress Treatments (Cold stress)Link to GEO
11.999.3GSM184511Pericycle root cells 2hr continuous KNO3 treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
11.799.3GSM218589Protoplasted root cells 2hr transitory KNO3 treated, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
11.699.3GSM184537Whole roots 2hr KCl control treated then frozen, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
11.199.2GSM142754MJ001_ATH1_A5-jones-WT-Rep3GSE6165The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.Link to GEO
11.199.2GSM176878AWP_AL_Txed_2GSE7334Microarray Analysis of Arabidopsis Genome Response to Aluminum StressLink to GEO
10.899.2GSM184903Arabidopsis, root cells, stele, standard conditions, replicate 3GSE7641Expression analysis of root cell-types after treatment with saltLink to GEO
10.799.2GSM184483Lateral Root Cap root cells 2hr continuous KNO3 treated, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
10.599.2GSM143306High_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
10.399.2GSM184539Whole roots 2hr KCl control treated then frozen, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
10.399.2GSM226536L6SBGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular functionLink to GEO
10.099.2GSM266662Arabidopsis, root cells, epidermis and lateral root cap, -Fe, replicate 1GSE10501Expression analysis of root cell-types after iron deficiency (-Fe) treatmentLink to GEO
9.999.1GSM184484Lateral Root Cap root cells 2hr continuous KNO3 treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
9.999.1GSM218586Pericycle root cells 2hr continuous KNO3 and MSX and Gln treated, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
9.799.1GSM157306Gan_1-3_wildtype-nitrate-minus(WNM)_Rep2_ATH1GSE6824Identification of genes involved in nutritional regulation of root architectureLink to GEO
9.699.1GSM184545Whole roots 2hr KNO3 treated then frozen, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
9.699.1GSM265411Arabidopsis, whole roots, -Fe, replicate 1GSE10496Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe)Link to GEO
9.699.1GSM184528Stele root cells 2hr continuous KNO3 treated, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
9.599.1GSM218587Pericycle root cells 2hr continuous KNO3 and MSX and Gln treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
9.499.1GSM184536Protoplasted root cells 2hr continuous KNO3 treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
9.499.1GSM131277AtGen_6-1521_Cold(4°C)-Roots-12.0h_Rep1GSE5621AtGenExpress: Stress Treatments (Cold stress)Link to GEO
9.199.1GSM131269AtGen_6-1321_Cold(4°C)-Roots-3.0h_Rep1GSE5621AtGenExpress: Stress Treatments (Cold stress)Link to GEO
9.099.1GSM184532Protoplasted root cells 2hr KCl control treated, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
8.999.0GSM260882Yap_A1-AMF_Rep2GSE10323Testing Arabidopsis for the presence of arbuscular mycorrhizal signalling pathwaysLink to GEO
8.999.0GSM184535Protoplasted root cells 2hr continuous KNO3 treated, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
8.899.0GSM143300Ts_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
8.899.0ArrayExpressE-MEXP-791-raw-cel-1122937605---



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