Specifically-expressed experiments

Gene ID	At5g53110
Gene name	-
Functional description	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
66.4	99.8	GSM226530	LCOLUMELLASB	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
49.0	99.8	GSM142853	MG001_ATH1_A6-Torres-2N6	GSE6176	Impact of Type III effectors on plant defense responses
48.4	99.8	GSM184537	Whole roots 2hr KCl control treated then frozen, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
46.7	99.8	GSM128673	Underwood_1-25_hrpA-10e8-7h_Rep1_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
39.0	99.8	GSM142852	MG001_ATH1_A5-Torres-2N3	GSE6176	Impact of Type III effectors on plant defense responses
36.4	99.7	GSM128672	Underwood_1-27_hrpA-10e8-7h_Rep3_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
35.9	99.7	ArrayExpress	E-MEXP-828-raw-cel-1156922485	-	-	-
33.0	99.7	GSM131111	AtGen_B-39_3-4-4_REP3_ATH1	GSE5615	AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
32.0	99.7	GSM131113	AtGen_B-41_3-6-4_REP3_ATH1	GSE5615	AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
29.6	99.7	ArrayExpress	E-MEXP-807-raw-cel-1173273170	-	-	-
29.5	99.7	GSM142829	GM001_ATH1_A11-Torres-5N3	GSE6176	Impact of Type III effectors on plant defense responses
29.1	99.7	ArrayExpress	E-MEXP-828-raw-cel-1156922296	-	-	-
28.1	99.7	GSM142851	MG001_ATH1_A4-Torres-2N1	GSE6176	Impact of Type III effectors on plant defense responses
27.5	99.7	GSM131139	AtGen_B-25_2-4-4_REP2_ATH1	GSE5615	AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
25.6	99.7	GSM184556	Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
24.3	99.6	GSM128669	Underwood_1-22_hrpAfliC-10e8-7h_Rep1_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
24.2	99.6	GSM142833	MG001_ATH1_A10-Torres-5N1	GSE6176	Impact of Type III effectors on plant defense responses
23.5	99.6	GSM131141	AtGen_B-27_2-6-4_REP2_ATH1	GSE5615	AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
23.4	99.6	GSM128683	Underwood_1-36_E.coli-0157-H7-10e8-7h_Rep2_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
23.3	99.6	ArrayExpress	E-MEXP-828-raw-cel-1156922595	-	-	-
22.6	99.6	GSM142835	MG001_ATH1_A13-Torres-4N1	GSE6176	Impact of Type III effectors on plant defense responses
22.6	99.6	ArrayExpress	E-MEXP-828-raw-cel-1156922987	-	-	-
21.0	99.6	GSM176876	AWP_AL_Txed_1	GSE7334	Microarray Analysis of Arabidopsis Genome Response to Aluminum Stress
20.9	99.6	ArrayExpress	E-MEXP-828-raw-cel-1156922455	-	-	-
20.6	99.6	GSM265473	Arabidopsis, whole roots, -Fe, 72 hour, rep 1	GSE10502	Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis roots
19.8	99.6	GSM131127	AtGen_B-13_1-6-4_REP1_ATH1	GSE5615	AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
19.8	99.6	GSM157326	Hammond_3-10_Control-root_Rep2_ATH1	GSE6825	Differential gene expression patterns in potassium-starved and Caesium-treated plants
19.5	99.6	ArrayExpress	E-MEXP-828-raw-cel-1156922368	-	-	-
19.3	99.6	GSM128686	Underwood_1-39_E.coli-TUV86-2-fliC-10e8-7h_Rep2_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
19.1	99.6	ArrayExpress	E-MEXP-828-raw-cel-1156922829	-	-	-
19.0	99.5	ArrayExpress	E-MEXP-828-raw-cel-1156922509	-	-	-
18.9	99.5	ArrayExpress	E-MEXP-828-raw-cel-1156922318	-	-	-
18.3	99.5	GSM265471	Arabidopsis, whole roots, -Fe, 48 hour, rep 1	GSE10502	Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis roots
18.1	99.5	ArrayExpress	E-NASC-76-raw-cel-1359878900	-	-	-
17.9	99.5	ArrayExpress	E-MEXP-828-raw-cel-1156922968	-	-	-
17.7	99.5	GSM128687	Underwood_1-40_E.coli-TUV86-2-fliC-10e8-7h_Rep3_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
17.4	99.5	GSM157323	Hammond_3-16_Control-root_Rep3_ATH1	GSE6825	Differential gene expression patterns in potassium-starved and Caesium-treated plants
17.4	99.5	ArrayExpress	E-MEXP-828-raw-cel-1156922794	-	-	-
17.1	99.5	GSM131140	AtGen_B-26_2-5-4_REP2_ATH1	GSE5615	AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
16.6	99.5	GSM128684	Underwood_1-37_E.coli-0157-H7-10e8-7h_Rep3_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
16.5	99.5	GSM128685	Underwood_1-38_E.coli-TUV86-2-fliC-10e8-7h_Rep1_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
16.4	99.5	ArrayExpress	E-MEXP-828-raw-cel-1156922342	-	-	-
16.3	99.5	GSM131112	AtGen_B-40_3-5-4_REP3_ATH1	GSE5615	AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
16.2	99.5	GSM133762	Lindsey_1-14_torpedo-root_Rep1_ATH1	GSE5730	Transcriptional profiling of laser-capture micro-dissected embryonic tissues
16.1	99.5	ArrayExpress	E-MEXP-828-raw-cel-1156922553	-	-	-
15.9	99.5	ArrayExpress	E-MEXP-828-raw-cel-1156922613	-	-	-
15.7	99.5	GSM142831	GM001_ATH1_A30-Torres-9N6_repeat1	GSE6176	Impact of Type III effectors on plant defense responses
15.6	99.5	ArrayExpress	E-MEXP-828-raw-cel-1156922923	-	-	-
15.5	99.5	ArrayExpress	E-MEXP-828-raw-cel-1156922572	-	-	-
15.4	99.5	ArrayExpress	E-MEXP-828-raw-cel-1156922809	-	-	-
15.3	99.4	GSM157325	Hammond_3-18_Caesium-treated-root_Rep3_ATH1	GSE6825	Differential gene expression patterns in potassium-starved and Caesium-treated plants
15.1	99.4	GSM128674	Underwood_1-26_hrpA-10e8-7h_Rep2_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
14.9	99.4	GSM131573	ATGE_99_A	GSE5631	AtGenExpress: Developmental series (roots)
14.8	99.4	GSM142847	MG001_ATH1_A28-Torres-9N1	GSE6176	Impact of Type III effectors on plant defense responses
14.8	99.4	ArrayExpress	E-MEXP-828-raw-cel-1156922467	-	-	-
14.3	99.4	GSM142848	MG001_ATH1_A29-Torres-9N3	GSE6176	Impact of Type III effectors on plant defense responses
14.1	99.4	GSM128671	Underwood_1-24_hrpAfliC-10e8-7h_Rep3_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
14.1	99.4	ArrayExpress	E-MEXP-828-raw-cel-1156922634	-	-	-
14.1	99.4	GSM142830	GM001_ATH1_A14-Torres-4N3_repeat2	GSE6176	Impact of Type III effectors on plant defense responses
13.9	99.4	ArrayExpress	E-MEXP-828-raw-cel-1156922533	-	-	-
13.6	99.4	GSM291124	root - 21% oxygen - 48h - F	GSE11558	transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
13.5	99.4	GSM157327	Hammond_3-11_Potassium-starved-root_Rep2_ATH1	GSE6825	Differential gene expression patterns in potassium-starved and Caesium-treated plants
13.1	99.4	GSM131575	ATGE_99_C	GSE5631	AtGenExpress: Developmental series (roots)
13.0	99.4	GSM157315	Hammond_3-5_Potassium-starved-root_Rep1_ATH1	GSE6825	Differential gene expression patterns in potassium-starved and Caesium-treated plants
13.0	99.4	ArrayExpress	E-MEXP-828-raw-cel-1156922731	-	-	-
12.9	99.3	ArrayExpress	E-MEXP-828-raw-cel-1156922750	-	-	-
12.9	99.3	ArrayExpress	E-MEXP-1094-raw-cel-1379507313	-	-	-
12.9	99.3	GSM75521	slr-1 6h NAA replicate 2	GSE3350	SLR/IAA14-dependent auxin induced lateral root initiation
12.8	99.3	ArrayExpress	E-MEXP-828-raw-cel-1156922684	-	-	-
12.7	99.3	GSM131410	AtGen_6-7622_UV-Bstress-Roots-24.0h_Rep2	GSE5626	AtGenExpress: Stress Treatments (UV-B stress)
12.7	99.3	GSM157328	Hammond_3-12_Caesium-treated-root_Rep2_ATH1	GSE6825	Differential gene expression patterns in potassium-starved and Caesium-treated plants
12.6	99.3	GSM179972	Arabidopsis roots, mock treatment, replica 2	GSE7432	Ethylene and auxin interactions in the roots of Arabidopsis seedlings
12.4	99.3	GSM157324	Hammond_3-17_Potassium-starved-root_Rep3_ATH1	GSE6825	Differential gene expression patterns in potassium-starved and Caesium-treated plants
12.3	99.3	GSM179961	Arabidopsis roots, ethylene treatment, replica 2	GSE7432	Ethylene and auxin interactions in the roots of Arabidopsis seedlings
12.0	99.3	GSM131574	ATGE_99_B	GSE5631	AtGenExpress: Developmental series (roots)
11.9	99.3	ArrayExpress	E-MEXP-828-raw-cel-1156922891	-	-	-
11.9	99.3	ArrayExpress	E-MEXP-828-raw-cel-1156922708	-	-	-
11.9	99.3	ArrayExpress	E-MEXP-828-raw-cel-1156922659	-	-	-
11.8	99.3	GSM179969	Arabidopsis aux1 mutant roots, ethylene treatment, replica 1	GSE7432	Ethylene and auxin interactions in the roots of Arabidopsis seedlings
11.8	99.3	ArrayExpress	E-MEXP-828-raw-cel-1156922772	-	-	-
11.7	99.3	GSM179971	Arabidopsis roots, mock treatment, replica 1	GSE7432	Ethylene and auxin interactions in the roots of Arabidopsis seedlings
11.7	99.3	ArrayExpress	E-MEXP-547-raw-cel-863346376	-	-	-
11.6	99.3	GSM131270	AtGen_6-1322_Cold(4°C)-Roots-3.0h_Rep2	GSE5621	AtGenExpress: Stress Treatments (Cold stress)
11.6	99.3	ArrayExpress	E-MEXP-828-raw-cel-1156922944	-	-	-
11.4	99.3	ArrayExpress	E-MEXP-828-raw-cel-1156922872	-	-	-
11.4	99.3	GSM179958	Arabidopsis roots, air treatment, replica 1	GSE7432	Ethylene and auxin interactions in the roots of Arabidopsis seedlings
11.4	99.3	GSM291098	root - 08% oxygen - 48h - F	GSE11558	transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
11.0	99.2	ArrayExpress	E-MEXP-807-raw-cel-1173273060	-	-	-
10.9	99.2	ArrayExpress	E-MEXP-828-raw-cel-1156922846	-	-	-
10.7	99.2	GSM75512	Col-0 0h NAA replicate 2	GSE3350	SLR/IAA14-dependent auxin induced lateral root initiation
10.7	99.2	ArrayExpress	E-MEXP-828-raw-cel-1156922438	-	-	-
10.5	99.2	ArrayExpress	E-MEXP-828-raw-cel-1156922905	-	-	-
10.5	99.2	ArrayExpress	E-MEXP-828-raw-cel-1156922416	-	-	-
10.4	99.2	GSM133773	Lindsey_1-25_torpedo-meristem_Rep1_ATH1	GSE5730	Transcriptional profiling of laser-capture micro-dissected embryonic tissues
10.3	99.2	GSM143299	High_Na_seg_pool_ts_col_F2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
10.2	99.2	GSM265474	Arabidopsis, whole roots, -Fe, 72 hour, rep 2	GSE10502	Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis roots
10.2	99.2	GSM142834	MG001_ATH1_A12-Torres-5N6	GSE6176	Impact of Type III effectors on plant defense responses
10.2	99.2	GSM157331	Coates_1-3_Col-3_Rep1_ATH1	GSE6826	Identification of candidate Arabidillo target genes in Arabidopsis
10.1	99.2	GSM142849	MG001_ATH1_A2-Torres-1N3	GSE6176	Impact of Type III effectors on plant defense responses
10.0	99.2	GSM179960	Arabidopsis roots, ethylene treatment, replica 1	GSE7432	Ethylene and auxin interactions in the roots of Arabidopsis seedlings
10.0	99.2	GSM131572	ATGE_98_C	GSE5631	AtGenExpress: Developmental series (roots)
9.9	99.1	GSM142854	MG001_ATH1_A7-Torres-3N1	GSE6176	Impact of Type III effectors on plant defense responses
9.9	99.1	GSM179963	Arabidopsis aux1 mutant roots, air treatment, replica 1	GSE7432	Ethylene and auxin interactions in the roots of Arabidopsis seedlings
9.8	99.1	GSM131265	AtGen_6-1221_Cold(4°C)-Roots-1.0h_Rep1	GSE5621	AtGenExpress: Stress Treatments (Cold stress)
9.8	99.1	ArrayExpress	E-MEXP-1094-raw-cel-1379507273	-	-	-
9.7	99.1	GSM128670	Underwood_1-23_hrpAfliC-10e8-7h_Rep2_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
9.7	99.1	GSM291119	root - 21% oxygen - 48h - A	GSE11558	transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
9.6	99.1	ArrayExpress	E-NASC-76-raw-cel-1359878976	-	-	-
9.3	99.1	ArrayExpress	E-MEXP-807-raw-cel-1173272948	-	-	-
9.3	99.1	GSM134367	St.Clair_1-28_339_Cvi-1_0.30mM-SA-in-0.02%-silwet_Rep1_ATH1	GSE5753	Expression Level Polymorphism Project (ELP) - Cvi-1
9.2	99.1	GSM75516	slr-1 0h NAA replicate 1	GSE3350	SLR/IAA14-dependent auxin induced lateral root initiation
9.2	99.1	GSM75508	Col-0 0h NAA replicate 1	GSE3350	SLR/IAA14-dependent auxin induced lateral root initiation
9.2	99.1	GSM131126	AtGen_B-12_1-5-4_REP1_ATH1	GSE5615	AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
9.2	99.1	GSM231201	chl1 at T0, biological rep3	GSE9148	Expression data of 10-day-old wild-type and chl1-5 plants exposed to 25 mM nitrate for 0h or 0.5h
9.1	99.1	GSM231195	wild-type at T0, biological rep3	GSE9148	Expression data of 10-day-old wild-type and chl1-5 plants exposed to 25 mM nitrate for 0h or 0.5h
9.1	99.1	GSM131564	ATGE_94_A	GSE5631	AtGenExpress: Developmental series (roots)
8.9	99.0	GSM131561	ATGE_93_A	GSE5631	AtGenExpress: Developmental series (roots)
8.8	99.0	ArrayExpress	E-MEXP-807-raw-cel-1173273116	-	-	-
8.7	99.0	GSM290828	root - 04% oxygen - 48h - F	GSE11558	transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants

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