Specifically-expressed experiments

Gene ID	At5g52570
Gene name	BETA-OHASE 2 (BETA-CAROTENE HYDROXYLASE 2)
Functional description	Converts β-carotene to zeaxanthin via cryptoxanthin.

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
54.6	99.8	ArrayExpress	E-MEXP-285-raw-cel-440782938	-	-	-
50.0	99.8	GSM133304	RIKEN-NAKABAYASHI1B	GSE5700	AtGenExpress: Effect of ABA during seed imbibition
46.6	99.8	GSM133303	RIKEN-NAKABAYASHI1A	GSE5700	AtGenExpress: Effect of ABA during seed imbibition
46.4	99.8	GSM142663	NE001_ATH1_A1-Evans-w20	GSE6154	Molecular basis of respiratory burst-mediated thermotolerance in Arabidopsis
45.0	99.8	GSM142666	NE001_ATH1_A4-Evans-m20	GSE6154	Molecular basis of respiratory burst-mediated thermotolerance in Arabidopsis
41.3	99.8	ArrayExpress	E-ATMX-19-raw-cel-1375547479	-	-	-
41.1	99.8	ArrayExpress	E-MEXP-285-raw-cel-440782853	-	-	-
34.1	99.7	GSM318331	EL_14DAS_2	GSE12676	Arabidopsis thaliana Ler developmental series
30.6	99.7	GSM297382	At.StarchSD.WTSS3.SS3R1L1	GSE11708	Global gene expression in Atss3 mutant and WT over short day diurnal cycle
28.8	99.7	ArrayExpress	E-MEXP-185-raw-cel-358911718	-	-	-
27.3	99.7	ArrayExpress	E-MEXP-185-raw-cel-358911606	-	-	-
26.1	99.7	ArrayExpress	E-ATMX-33-raw-cel-1562596288	-	-	-
25.8	99.7	GSM131391	AtGen_6-7211_UV-Bstress-Shoots-1.0h_Rep1	GSE5626	AtGenExpress: Stress Treatments (UV-B stress)
25.7	99.7	ArrayExpress	Evans_2-2_col-WT-cold_ATH1	-	-	-
25.2	99.6	ArrayExpress	E-MEXP-185-raw-cel-358911774	-	-	-
24.3	99.6	GSM297392	At.StarchSD.WTSS3.WTR1L1	GSE11708	Global gene expression in Atss3 mutant and WT over short day diurnal cycle
24.0	99.6	ArrayExpress	E-ATMX-33-raw-cel-1562596264	-	-	-
23.7	99.6	ArrayExpress	Evans_2-4_fab1-mut-cold_ATH1	-	-	-
23.5	99.6	GSM142871	GW001_ATH1_A16-Warre-2ca	GSE6177	The effects of the sfr2, sfr3 and sfr6 mutations on lyotropic stress responses
22.7	99.6	GSM183506	WT_for_MYB29/76_rep3	GSE7570	ATR1_like_Clade_OE_and_miR
22.6	99.6	ArrayExpress	E-MEXP-185-raw-cel-358912110	-	-	-
21.5	99.6	GSM184151	ATR1_OE_rep2	GSE7570	ATR1_like_Clade_OE_and_miR
21.0	99.6	GSM142869	GW001_ATH1_A14-Warre-3ca	GSE6177	The effects of the sfr2, sfr3 and sfr6 mutations on lyotropic stress responses
20.7	99.6	GSM318330	EL_14DAS_1	GSE12676	Arabidopsis thaliana Ler developmental series
20.4	99.6	GSM131336	AtGen_6-4112_Droughtstress-Shoots-0.5h_Rep2	GSE5624	AtGenExpress: Stress Treatments (Drought stress)
20.1	99.6	GSM134779	gun1-1_5day_-lincomycin_rep1	GSE5770	col0,gun1,abi4-102, w/wo lincomycin
19.3	99.6	GSM131339	AtGen_6-4211_Droughtstress-Shoots-1.0h_Rep1	GSE5624	AtGenExpress: Stress Treatments (Drought stress)
19.2	99.6	GSM142804	SS001_ATH1_A7-Smith-10	GSE6174	Gene expression and carbohydrate metabolism through the diurnal cycle
19.0	99.5	ArrayExpress	E-MEXP-185-raw-cel-358911662	-	-	-
19.0	99.5	GSM131392	AtGen_6-7212_UV-Bstress-Shoots-1.0h_Rep2	GSE5626	AtGenExpress: Stress Treatments (UV-B stress)
19.0	99.5	ArrayExpress	E-MEXP-185-raw-cel-358911998	-	-	-
18.9	99.5	GSM134774	Col-0_5day_-lincomycin_rep2	GSE5770	col0,gun1,abi4-102, w/wo lincomycin
18.8	99.5	GSM131259	AtGen_6-1111_Cold(4°C)-Shoots-0.5h_Rep1	GSE5621	AtGenExpress: Stress Treatments (Cold stress)
18.5	99.5	ArrayExpress	E-MEXP-285-raw-cel-440783091	-	-	-
18.5	99.5	GSM77175	04h low CO2 + light replicate A	GSE3423	Carbon fixation (endogenous sugar) and light-dependent gene expression
17.9	99.5	GSM134772	Col-0_5day_-lincomycin_rep1	GSE5770	col0,gun1,abi4-102, w/wo lincomycin
17.5	99.5	ArrayExpress	E-MEXP-185-raw-cel-358911830	-	-	-
17.5	99.5	GSM142870	GW001_ATH1_A15-Warre-2ca	GSE6177	The effects of the sfr2, sfr3 and sfr6 mutations on lyotropic stress responses
17.0	99.5	ArrayExpress	E-MEXP-285-raw-cel-440783035	-	-	-
16.7	99.5	ArrayExpress	Evans_2-12_fab3-7-8-mut-aeq-cold_ATH1	-	-	-
16.3	99.5	ArrayExpress	E-MEXP-1304-raw-cel-1530618308	-	-	-
16.3	99.5	ArrayExpress	E-MEXP-557-raw-cel-879731502	-	-	-
15.7	99.5	GSM133827	Walters_A-06-Kruger-WH3_REP3	GSE5737	Carbohydrate- and redox-regulation of gene expression in a TPT mutant
15.7	99.5	ArrayExpress	E-MEXP-557-raw-cel-879731511	-	-	-
15.7	99.5	GSM131219	Scrase-Field_1-3_Col-0-wildtype_Rep2_ATH1	GSE5618	Comparative transcriptome analysis of wild type and two knockout alleles of At-CAMTA
15.6	99.5	GSM142868	GW001_ATH1_A13-Warre-3ca	GSE6177	The effects of the sfr2, sfr3 and sfr6 mutations on lyotropic stress responses
15.5	99.5	GSM134767	abi4-102_5day_-lincomycin_rep1	GSE5770	col0,gun1,abi4-102, w/wo lincomycin
15.5	99.5	GSM133826	Walters_A-05-Kruger-WH2_REP2	GSE5737	Carbohydrate- and redox-regulation of gene expression in a TPT mutant
15.4	99.5	GSM131217	Scrase-Field_1-1_Col-0-wildtype_Rep1_ATH1	GSE5618	Comparative transcriptome analysis of wild type and two knockout alleles of At-CAMTA
15.4	99.5	ArrayExpress	Evans_2-10_col-aeq-cold_ATH1	-	-	-
15.1	99.4	GSM131235	AtGen_6-0211_Control-Shoots-1.0h_Rep1	GSE5620	AtGenExpress: Stress Treatments (Control plants)
15.0	99.4	GSM77180	04h low CO2 + dark replicate B	GSE3423	Carbon fixation (endogenous sugar) and light-dependent gene expression
14.9	99.4	GSM142815	SS002_ATH1_A7-smith-13h	GSE6174	Gene expression and carbohydrate metabolism through the diurnal cycle
14.9	99.4	GSM142865	GW001_ATH1_A10-Warre-Wca	GSE6177	The effects of the sfr2, sfr3 and sfr6 mutations on lyotropic stress responses
14.8	99.4	ArrayExpress	E-MEXP-185-raw-cel-358911942	-	-	-
14.7	99.4	GSM131419	AtGen_6-8211_Woundingstress-Shoots-1.0h_Rep1	GSE5627	AtGenExpress: Stress Treatments (Wounding stress)
14.6	99.4	GSM275643	flu_2h	GSE10876	Expression data from Arabidopsis thaliana (Ler) rosette leaves after the release of singlet oxygen inside plastids
14.6	99.4	GSM131448	AtGen_6-9212_Heatstress-Shoots-1.0h_Rep2	GSE5628	AtGenExpress: Stress Treatments (Heat stress)
14.5	99.4	ArrayExpress	E-MEXP-1443-raw-cel-1581869921	-	-	-
14.4	99.4	GSM142866	GW001_ATH1_A11-Warre-6ca	GSE6177	The effects of the sfr2, sfr3 and sfr6 mutations on lyotropic stress responses
14.0	99.4	GSM131279	AtGen_6-1611_Cold(4°C)-Shoots-24.0h_Rep1	GSE5621	AtGenExpress: Stress Treatments (Cold stress)
14.0	99.4	ArrayExpress	Evans_2-8_35s-FAD3-cold_ATH1	-	-	-
14.0	99.4	ArrayExpress	E-ATMX-19-raw-cel-1375547496	-	-	-
13.9	99.4	ArrayExpress	E-MEXP-185-raw-cel-358911886	-	-	-
13.9	99.4	GSM134780	gun1-1_5day_-lincomycin_rep2	GSE5770	col0,gun1,abi4-102, w/wo lincomycin
13.5	99.4	GSM131280	AtGen_6-1612_Cold(4°C)-Shoots-24.0h_Rep2	GSE5621	AtGenExpress: Stress Treatments (Cold stress)
13.1	99.4	GSM131256	AtGen_6-0612_Control-Shoots-24.0h_Rep2	GSE5620	AtGenExpress: Stress Treatments (Control plants)
13.1	99.4	GSM131147	AtGen_B-33_3-5-1_REP3_ATH1	GSE5615	AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
13.1	99.4	ArrayExpress	E-MEXP-1344-raw-cel-1559561713	-	-	-
13.1	99.4	ArrayExpress	E-MEXP-265-raw-cel-414618093	-	-	-
13.0	99.4	GSM183514	MYB29_OE_rep2	GSE7570	ATR1_like_Clade_OE_and_miR
12.7	99.3	GSM131260	AtGen_6-1112_Cold(4°C)-Shoots-0.5h_Rep2	GSE5621	AtGenExpress: Stress Treatments (Cold stress)
12.7	99.3	GSM131340	AtGen_6-4212_Droughtstress-Shoots-1.0h_Rep2	GSE5624	AtGenExpress: Stress Treatments (Drought stress)
12.6	99.3	ArrayExpress	E-ATMX-19-raw-cel-1375547513	-	-	-
12.6	99.3	GSM131224	AtGen_6-0012_Control-Shoots-0h_Rep2	GSE5620	AtGenExpress: Stress Treatments (Control plants)
12.6	99.3	ArrayExpress	E-ATMX-33-raw-cel-1562596081	-	-	-
12.5	99.3	GSM131468	AtGen_6-9612_Heatstress(3h)+21hrecovery-Shoots-24.0h_Rep2	GSE5628	AtGenExpress: Stress Treatments (Heat stress)
12.5	99.3	ArrayExpress	E-MEXP-1304-raw-cel-1530618514	-	-	-
12.4	99.3	ArrayExpress	E-MEXP-1344-raw-cel-1559561683	-	-	-
12.2	99.3	GSM133823	Walters_A-02-Kruger-WL2_REP2	GSE5737	Carbohydrate- and redox-regulation of gene expression in a TPT mutant
12.1	99.3	GSM131443	AtGen_6-9111_Heatstress-Shoots-0.5h_Rep1	GSE5628	AtGenExpress: Stress Treatments (Heat stress)
12.1	99.3	ArrayExpress	E-MEXP-449-raw-cel-676423253	-	-	-
12.0	99.3	GSM131420	AtGen_6-8214_Woundingstress-Shoots-1.0h_Rep2	GSE5627	AtGenExpress: Stress Treatments (Wounding stress)
11.9	99.3	GSM142781	AM002_ATH1_A6-MCCOR-WDB	GSE6169	Seedling transcriptome affected by a far-red light preconditioning treatment to block chloroplast development.
11.8	99.3	GSM297387	At.StarchSD.WTSS3.SS3R2L1	GSE11708	Global gene expression in Atss3 mutant and WT over short day diurnal cycle
11.7	99.3	GSM142864	GW001_ATH1_A9-Warre-Wca	GSE6177	The effects of the sfr2, sfr3 and sfr6 mutations on lyotropic stress responses
11.6	99.3	GSM142664	NE001_ATH1_A2-Evans-w30	GSE6154	Molecular basis of respiratory burst-mediated thermotolerance in Arabidopsis
11.5	99.3	GSM131288	AtGen_6-2212_Osmoticstress-Shoots-1.0h_Rep2	GSE5622	AtGenExpress: Stress Treatments (Osmotic stress)
11.4	99.3	GSM133822	Walters_A-01-Kruger-WL1_REP1	GSE5737	Carbohydrate- and redox-regulation of gene expression in a TPT mutant
11.4	99.3	GSM131129	AtGen_B-15_2-1-1_REP2_ATH1	GSE5615	AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
11.4	99.3	GSM131218	Scrase-Field_1-2_camta1-2-Col-0_Rep1_ATH1	GSE5618	Comparative transcriptome analysis of wild type and two knockout alleles of At-CAMTA
11.3	99.3	GSM131231	AtGen_6-0111_Control-Shoots-0.5h_Rep1	GSE5620	AtGenExpress: Stress Treatments (Control plants)
11.0	99.2	GSM131272	AtGen_6-1412_Cold(4°C)-Shoots-6.0h_Rep2	GSE5621	AtGenExpress: Stress Treatments (Cold stress)
11.0	99.2	GSM133405	Bramke_A5-warre-S2C	GSE5711	Cold induced changes: differences between the Arabidopsis thaliana wild type and freezing sensitive mutants.
11.0	99.2	ArrayExpress	E-MEXP-185-raw-cel-358912054	-	-	-
11.0	99.2	ArrayExpress	E-MEXP-1443-raw-cel-1581869573	-	-	-
10.9	99.2	GSM297397	At.StarchSD.WTSS3.WTR2L1	GSE11708	Global gene expression in Atss3 mutant and WT over short day diurnal cycle
10.7	99.2	GSM131780	Quick_A23_2-96hr_Rep1_ATH1	GSE5637	Systemic signalling of irradiance and CO2 concentration in Arabidopsis (Treatment 2: Elevated CO2 and Ambient Light)
10.6	99.2	GSM131220	Scrase-Field_1-4_camta1-2-Col-0_Rep2_ATH1	GSE5618	Comparative transcriptome analysis of wild type and two knockout alleles of At-CAMTA
10.5	99.2	GSM142667	NE001_ATH1_A5-Evans-m30	GSE6154	Molecular basis of respiratory burst-mediated thermotolerance in Arabidopsis
10.4	99.2	GSM142805	SS001_ATH1_A8-Smith-11	GSE6174	Gene expression and carbohydrate metabolism through the diurnal cycle
10.4	99.2	GSM131467	AtGen_6-9611_Heatstress(3h)+21hrecovery-Shoots-24.0h_Rep1	GSE5628	AtGenExpress: Stress Treatments (Heat stress)
10.3	99.2	GSM131268	AtGen_6-1312_Cold(4°C)-Shoots-3.0h_Rep2	GSE5621	AtGenExpress: Stress Treatments (Cold stress)
10.2	99.2	GSM131131	AtGen_B-17_2-3-1_REP2_ATH1	GSE5615	AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
10.2	99.2	GSM128655	Underwood_1-8_DC3000-10e6-24h_Rep2_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
10.2	99.2	GSM131331	AtGen_6-4711_Droughtstress-Shoots-0.25h_Rep1	GSE5624	AtGenExpress: Stress Treatments (Drought stress)
10.1	99.2	GSM131364	AtGen_6-5212_Genotoxicstress-Shoots-1.0h_Rep2	GSE5625	AtGenExpress: Stress Treatments (Genotoxic stress)
9.9	99.1	GSM134768	abi4-102_5day_-lincomycin_rep2	GSE5770	col0,gun1,abi4-102, w/wo lincomycin
9.9	99.1	GSM152135	Col-0 drought 1	GSE6583	Genome-wide transcriptome analysis of Arabidopsis and siz1-3 response to drought stress
9.8	99.1	GSM142816	SS002_ATH1_A8-smith-14h	GSE6174	Gene expression and carbohydrate metabolism through the diurnal cycle
9.8	99.1	GSM131387	AtGen_6-7111_UV-Bstress-Shoots-0.5h_Rep1	GSE5626	AtGenExpress: Stress Treatments (UV-B stress)
9.8	99.1	GSM131135	AtGen_B-21_2-7-1_REP2_ATH1	GSE5615	AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
9.7	99.1	GSM131255	AtGen_6-0611_Control-Shoots-24.0h_Rep1	GSE5620	AtGenExpress: Stress Treatments (Control plants)
9.7	99.1	GSM131332	AtGen_6-4712_Droughtstress-Shoots-0.25h_Rep2	GSE5624	AtGenExpress: Stress Treatments (Drought stress)
9.7	99.1	GSM131411	AtGen_6-8715_Woundingstress-Shoots-0.25h_Rep1	GSE5627	AtGenExpress: Stress Treatments (Wounding stress)
9.7	99.1	GSM152137	Col-0 drought 2	GSE6583	Genome-wide transcriptome analysis of Arabidopsis and siz1-3 response to drought stress
9.7	99.1	GSM131143	AtGen_B-29_3-1-1_REP3_ATH1	GSE5615	AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
9.7	99.1	ArrayExpress	E-ATMX-33-raw-cel-1562596310	-	-	-
9.6	99.1	GSM133825	Walters_A-04-Kruger-WH1_REP1	GSE5737	Carbohydrate- and redox-regulation of gene expression in a TPT mutant
9.6	99.1	GSM183515	ATR1_OE_rep1	GSE7570	ATR1_like_Clade_OE_and_miR
9.6	99.1	GSM183504	WT_for_MYB29/76_rep1	GSE7570	ATR1_like_Clade_OE_and_miR
9.5	99.1	GSM131447	AtGen_6-9211_Heatstress-Shoots-1.0h_Rep1	GSE5628	AtGenExpress: Stress Treatments (Heat stress)
9.4	99.1	GSM131754	Quick_A22_1-96hr_Rep1_ATH1	GSE5636	Systemic signalling of irradiance and CO2 concentration in Arabidopsis (Treatment 1: Ambient CO2 and Ambient Light)
9.3	99.1	GSM152145	siz1-3 drought 3	GSE6583	Genome-wide transcriptome analysis of Arabidopsis and siz1-3 response to drought stress
9.3	99.1	GSM142775	AM002_ATH1_A10-MCCOR-ADA	GSE6169	Seedling transcriptome affected by a far-red light preconditioning treatment to block chloroplast development.
9.2	99.1	GSM142867	GW001_ATH1_A12-Warre-6ca	GSE6177	The effects of the sfr2, sfr3 and sfr6 mutations on lyotropic stress responses
9.2	99.1	GSM197146	S82-2_2 with array type ATH1 from Affymetrix	GSE7961	affy_aba_ath1-Characterization of aba3-1 suppressor mutants
9.2	99.1	GSM128718	Pieterse_1-4_Control-72h_Rep1_ATH1	GSE5525	Transcriptome changes of Arabidopsis during pathogen and insect attack
9.2	99.1	GSM244457	Arabidopsis wild-type_90-105 min_ Xanthomonas inoculated_biological rep2_exp4	GSE9674	Expression data from Arabidopsis plants misexpressing AtMYB30 after Xanthomonas inoculation at early timepoints
9.2	99.1	ArrayExpress	E-ATMX-19-raw-cel-1375547462	-	-	-
9.2	99.1	GSM131130	AtGen_B-16_2-2-1_REP2_ATH1	GSE5615	AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
9.1	99.1	GSM131223	AtGen_6-0011_Control-Shoots-0h_Rep1	GSE5620	AtGenExpress: Stress Treatments (Control plants)
9.1	99.1	GSM131232	AtGen_6-0112_Control-Shoots-0.5h_Rep2	GSE5620	AtGenExpress: Stress Treatments (Control plants)
9.1	99.1	ArrayExpress	E-MEXP-1299-raw-cel-1519901564	-	-	-
9.0	99.1	GSM272991	flu over-tAPX 14-2, biological rep1	GSE10812	Expression data from thylakoidal ascorbate peroxidase overexpressor Arabidopsis thaliana (Col) rosette leaves
9.0	99.1	GSM183516	MYB51_OE_rep1	GSE7570	ATR1_like_Clade_OE_and_miR
9.0	99.1	ArrayExpress	Evans_2-1_col-WT-ambient_ATH1	-	-	-
8.9	99.0	GSM77177	04h low CO2 + dark replicate A	GSE3423	Carbon fixation (endogenous sugar) and light-dependent gene expression
8.9	99.0	GSM197141	wt_2 with array type ATH1 from Affymetrix	GSE7961	affy_aba_ath1-Characterization of aba3-1 suppressor mutants
8.9	99.0	ArrayExpress	E-MEXP-449-raw-cel-676423362	-	-	-
8.9	99.0	GSM27360	WT Rosette Leaf	GSE680	Transcript Profiling of Arabidopsis Plant Life Cycle
8.9	99.0	GSM77056	00h Col-0 replicate B	GSE3416	Diurnal gene expression in Arabidopsis thaliana Col-0 rosette leaves
8.8	99.0	GSM131307	AtGen_6-3111_Saltstress-Shoots-0.5h_Rep1	GSE5623	AtGenExpress: Stress Treatments (Salt stress)
8.8	99.0	GSM142863	GW001_ATH1_A8-Warre-2na	GSE6177	The effects of the sfr2, sfr3 and sfr6 mutations on lyotropic stress responses
8.8	99.0	GSM131440	AtGen_6-9712_Heatstress-Shoots-0.25h_Rep2	GSE5628	AtGenExpress: Stress Treatments (Heat stress)
8.7	99.0	GSM152141	siz1-3 drought 1	GSE6583	Genome-wide transcriptome analysis of Arabidopsis and siz1-3 response to drought stress
8.7	99.0	GSM133824	Walters_A-03-Kruger-WL3_REP3	GSE5737	Carbohydrate- and redox-regulation of gene expression in a TPT mutant
8.7	99.0	GSM131439	AtGen_6-9711_Heatstress-Shoots-0.25h_Rep1	GSE5628	AtGenExpress: Stress Treatments (Heat stress)
8.7	99.0	GSM131144	AtGen_B-30_3-2-1_REP3_ATH1	GSE5615	AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
8.7	99.0	ArrayExpress	Evans_2-6_fab2-mut-cold_ATH1	-	-	-
8.6	99.0	ArrayExpress	E-MEXP-449-raw-cel-676423306	-	-	-

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