Specifically-expressed experiments

Gene ID At5g51830
Gene name pfkB-type carbohydrate kinase family protein
Functional description F:kinase activity, ribokinase activity;P:response to cadmium ion;C:cellular_component unknown;BOPAMF

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
171.6100.0ArrayExpressE-MEXP-1443-raw-cel-1581869745---
160.699.9ArrayExpressE-MEXP-1443-raw-cel-1581869803---
74.399.9GSM134350St.Clair_1-11_333_Col-0_0.30mM-SA-in-0.02%-silwet_Rep2_ATH1GSE5752Expression Level Polymorphism Project (ELP) - Col-0Link to GEO
65.999.8GSM134386St.Clair_1-47_334_Est_0.30mM-SA-in-0.02%-silwet_Rep2_ATH1GSE5754Expression Level Polymorphism Project (ELP) - EstLink to GEO
44.699.8GSM134351St.Clair_1-12_407_Col-0_0.30mM-SA-in-0.02%-silwet_Rep3_ATH1GSE5752Expression Level Polymorphism Project (ELP) - Col-0Link to GEO
43.299.8GSM142829GM001_ATH1_A11-Torres-5N3GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
40.699.8GSM134405St.Clair_1-102_350_Tsu-1_0.30mM-SA-in-0.02%-silwet_Rep3_ATH1GSE5755Expression Level Polymorphism Project (ELP) - Tsu-1Link to GEO
39.299.8ArrayExpressE-MEXP-546-raw-cel-863289532---
37.699.7GSM134439St.Clair_1-64_270b_Kin-0_0.30mM-SA-in-0.02%-silwet_Rep1_ATH1GSE5757Expression Level Polymorphism Project (ELP) - Kin-0Link to GEO
35.599.7GSM134457St.Clair_1-82_294_Mt-0_0.30mM-SA-in-0.02%-silwet_Rep1_ATH1GSE5758Expression Level Polymorphism Project (ELP) - Mt-0Link to GEO
35.299.7GSM134459St.Clair_1-84_379_Mt-0_0.30mM-SA-in-0.02%-silwet_Rep3_ATH1GSE5758Expression Level Polymorphism Project (ELP) - Mt-0Link to GEO
33.999.7GSM134421St.Clair_1-118_348_Van-0_0.30mM-SA-in-0.02%-silwet_Rep1_ATH1GSE5756Expression Level Polymorphism Project (ELP) - Van-0Link to GEO
33.099.7GSM134404St.Clair_1-101_324_Tsu-1_0.30mM-SA-in-0.02%-silwet_Rep2_ATH1GSE5755Expression Level Polymorphism Project (ELP) - Tsu-1Link to GEO
32.899.7ArrayExpressE-MEXP-1797-raw-cel-1669768039---
32.599.7GSM134458St.Clair_1-83_323_Mt-0_0.30mM-SA-in-0.02%-silwet_Rep2_ATH1GSE5758Expression Level Polymorphism Project (ELP) - Mt-0Link to GEO
30.199.7GSM131282AtGen_6-1622_Cold(4°C)-Roots-24.0h_Rep2GSE5621AtGenExpress: Stress Treatments (Cold stress)Link to GEO
29.999.7ArrayExpressE-MEXP-1797-raw-cel-1669768084---
28.299.7GSM134441St.Clair_1-66_380_Kin-0_0.30mM-SA-in-0.02%-silwet_Rep3_ATH1GSE5757Expression Level Polymorphism Project (ELP) - Kin-0Link to GEO
28.199.7GSM131281AtGen_6-1621_Cold(4°C)-Roots-24.0h_Rep1GSE5621AtGenExpress: Stress Treatments (Cold stress)Link to GEO
27.299.7GSM142830GM001_ATH1_A14-Torres-4N3_repeat2GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
25.999.7GSM142839MG001_ATH1_A18-Torres-6N6GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
25.299.6GSM184503Pericycle root cells 2hr KCl control treated, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
24.399.6ArrayExpressE-MEXP-546-raw-cel-863289476---
23.799.6GSM142837MG001_ATH1_A16-Torres-6N1GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
23.499.6ArrayExpressE-MEXP-546-raw-cel-863289424---
22.699.6ArrayExpressE-MEXP-1797-raw-cel-1669768030---
22.499.6GSM184912Arabidopsis, root cells, columella root cap, 140 mM NaCl, replicate 3GSE7641Expression analysis of root cell-types after treatment with saltLink to GEO
20.799.6GSM134403St.Clair_1-100_268b_Tsu-1_0.30mM-SA-in-0.02%-silwet_Rep1_ATH1GSE5755Expression Level Polymorphism Project (ELP) - Tsu-1Link to GEO
20.499.6GSM204069protoplast_hypoxia_rep1GSE8248Identification of hypoxia-inducible genes in Arabidopsis mesophyll cellsLink to GEO
20.399.6GSM128676Underwood_1-29_DC3000-10e8-7h_Rep2_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
19.999.6GSM133304RIKEN-NAKABAYASHI1BGSE5700AtGenExpress: Effect of ABA during seed imbibitionLink to GEO
19.699.6ArrayExpressE-MEXP-1094-raw-cel-1379507273---
19.199.6GSM134369St.Clair_1-30_433_Cvi-1_0.30mM-SA-in-0.02%-silwet_Rep3_ATH1GSE5753Expression Level Polymorphism Project (ELP) - Cvi-1Link to GEO
18.899.5GSM184530Stele root cells 2hr continuous KNO3 treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
18.899.5GSM128677Underwood_1-30_DC3000-10e8-7h_Rep3_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
18.499.5GSM184493Epidermis&Cortex root cells 2hr continuous KNO3 treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
18.199.5GSM184520Pericycle root cells 2hr continuous KNO3 and MSX treated, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
18.199.5GSM134387St.Clair_1-48_397_Est_0.30mM-SA-in-0.02%-silwet_Rep3_ATH1GSE5754Expression Level Polymorphism Project (ELP) - EstLink to GEO
17.599.5GSM134385St.Clair_1-46_293_Est_0.30mM-SA-in-0.02%-silwet_Rep1_ATH1GSE5754Expression Level Polymorphism Project (ELP) - EstLink to GEO
17.499.5ArrayExpressE-ATMX-13-raw-cel-1556149759---
17.399.5ArrayExpressE-MEXP-1443-raw-cel-1581869921---
17.199.5GSM142838MG001_ATH1_A17-Torres-6N3GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
17.199.5GSM133707Short_1-3_ozone_Rep2_ATH1GSE5722Functional Genomics of Ozone Stress in Arabidopsis.Link to GEO
16.899.5ArrayExpressE-MEXP-1797-raw-cel-1669767967---
16.799.5ArrayExpressE-ATMX-28-raw-cel-1441104835---
16.399.5ArrayExpressE-ATMX-13-raw-cel-1556149871---
16.299.5GSM133708Short_1-5_ozone_Rep3_ATH1GSE5722Functional Genomics of Ozone Stress in Arabidopsis.Link to GEO
16.199.5ArrayExpressE-MEXP-711-raw-cel-1563002733---
16.199.5GSM184536Protoplasted root cells 2hr continuous KNO3 treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
15.799.5ArrayExpressE-MEXP-807-raw-cel-1173272921---
15.499.5GSM134349St.Clair_1-10_292b_Col-0_0.30mM-SA-in-0.02%-silwet_Rep1_ATH1GSE5752Expression Level Polymorphism Project (ELP) - Col-0Link to GEO
15.199.4GSM134423St.Clair_1-120_434_Van-0_0.30mM-SA-in-0.02%-silwet_Rep3_ATH1GSE5756Expression Level Polymorphism Project (ELP) - Van-0Link to GEO
15.199.4GSM184545Whole roots 2hr KNO3 treated then frozen, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
15.099.4GSM184519Pericycle root cells 2hr continuous KNO3 and MSX treated, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
14.799.4GSM218594Whole roots 3.5hr KNO3 treated then frozen, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
14.599.4GSM134412St.Clair_1-109_347_Van-0_0.02%-silwet_Rep1_ATH1GSE5756Expression Level Polymorphism Project (ELP) - Van-0Link to GEO
14.399.4GSM184911Arabidopsis, root cells, columella root cap, 140 mM NaCl, replicate 2GSE7641Expression analysis of root cell-types after treatment with saltLink to GEO
14.399.4ArrayExpressE-MEXP-1797-raw-cel-1669767940---
14.299.4ArrayExpressE-MEXP-739-raw-cel-1099467267---
14.299.4GSM128675Underwood_1-28_DC3000-10e8-7h_Rep1_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
14.199.4GSM134359St.Clair_1-20_361_Cvi-1_0.02%-silwet_Rep2_ATH1GSE5753Expression Level Polymorphism Project (ELP) - Cvi-1Link to GEO
14.099.4GSM134440St.Clair_1-65_322_Kin-0_0.30mM-SA-in-0.02%-silwet_Rep2_ATH1GSE5757Expression Level Polymorphism Project (ELP) - Kin-0Link to GEO
13.899.4GSM128662Underwood_1-15_Cor-5x10e7-10h_Rep3_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
13.799.4GSM322549genotype: Wild-type Arabidopsis, ecotype Col-0 - treated or untreated: Bgh inoculated - rep2GSE12856Penetration resistance: Wildtype and ataf1-1 mutant response to Bgh 12 h after inoculation, 2*2 factorial designLink to GEO
13.799.4GSM184529Stele root cells 2hr continuous KNO3 treated, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
13.499.4GSM322550genotype: Wild-type Arabidopsis, ecotype Col-0 - treated or untreated: Bgh inoculated - rep3GSE12856Penetration resistance: Wildtype and ataf1-1 mutant response to Bgh 12 h after inoculation, 2*2 factorial designLink to GEO
13.399.4GSM184507Pericycle root cells 2hr transitory KNO3 treated, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
13.199.4GSM25873IAA/A Treated - 1GSE1491Identification of Inhibitors of Auxin Transcriptional Activation via Chemical Genetics in ArabidopsisLink to GEO
12.899.3GSM184488Epidermis&Cortex root cells 2hr transitory KNO3 treated, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
12.799.3GSM134367St.Clair_1-28_339_Cvi-1_0.30mM-SA-in-0.02%-silwet_Rep1_ATH1GSE5753Expression Level Polymorphism Project (ELP) - Cvi-1Link to GEO
12.799.3GSM218588Protoplasted root cells 2hr transitory KNO3 treated, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
12.799.3GSM134396St.Clair_1-93_349_Tsu-1_0.02%-silwet_Rep3_ATH1GSE5755Expression Level Polymorphism Project (ELP) - Tsu-1Link to GEO
12.699.3GSM218591Whole roots 3.5hr KCl control treated then frozen, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
12.599.3GSM205160protoplast_controlDNA_rep2GSE8257Identification of KIN10-target genes in Arabidopsis mesophyll cellsLink to GEO
12.199.3GSM266667Arabidopsis, root cells, columella root cap, -Fe, replicate 2GSE10501Expression analysis of root cell-types after iron deficiency (-Fe) treatmentLink to GEO
11.999.3ArrayExpressE-MEXP-711-raw-cel-1563002768---
11.999.3GSM218592Whole roots 3.5hr KCl control treated then frozen, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
11.299.2GSM131112AtGen_B-40_3-5-4_REP3_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
11.199.2GSM25874IAA/A Treated - 2GSE1491Identification of Inhibitors of Auxin Transcriptional Activation via Chemical Genetics in ArabidopsisLink to GEO
11.099.2GSM184538Whole roots 2hr KCl control treated then frozen, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
11.099.2GSM25870B Treated - 1GSE1491Identification of Inhibitors of Auxin Transcriptional Activation via Chemical Genetics in ArabidopsisLink to GEO
10.699.2GSM157362Ulker_2-5_WRKY-KO-40-Pst-DC3000_Rep1_ATH1GSE6829Group II-A WRKY transcription factors and early leaf senescenceLink to GEO
10.699.2ArrayExpressE-TABM-52-raw-cel-1583682926---
10.699.2ArrayExpressE-TABM-60-raw-cel-680980342---
10.599.2GSM179973Arabidopsis roots, IAA treatment, replica 1GSE7432Ethylene and auxin interactions in the roots of Arabidopsis seedlingsLink to GEO
10.499.2ArrayExpressE-TABM-61-raw-cel-683343528---
10.499.2GSM133120RIKEN-YAMAUCHI2BGSE5687AtGenExpress: Different temperature treatment of seedsLink to GEO
10.499.2GSM218595Whole roots 3.5hr KNO3 treated then frozen, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
10.199.2GSM218590Protoplasted root cells 2hr transitory KNO3 treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
10.199.2GSM142855MG001_ATH1_A8-Torres-3N3GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
9.899.1ArrayExpressE-MEXP-739-raw-cel-1099467339---
9.899.1GSM134450St.Clair_1-75_376_Mt-0_0.02%-silwet_Rep3_ATH1GSE5758Expression Level Polymorphism Project (ELP) - Mt-0Link to GEO
9.699.1ArrayExpressE-TABM-60-raw-cel-680980278---
9.599.1ArrayExpressE-MEXP-739-raw-cel-1099467276---
9.599.1GSM184909Arabidopsis, root cells, epidermis and lateral root cap, 140 mM NaCl, replicate 3GSE7641Expression analysis of root cell-types after treatment with saltLink to GEO
9.499.1GSM184559Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes with KNO3, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
9.499.1GSM134449St.Clair_1-74_320_Mt-0_0.02%-silwet_Rep2_ATH1GSE5758Expression Level Polymorphism Project (ELP) - Mt-0Link to GEO
9.499.1GSM25867A Treated - 2GSE1491Identification of Inhibitors of Auxin Transcriptional Activation via Chemical Genetics in ArabidopsisLink to GEO
9.299.1GSM142834MG001_ATH1_A12-Torres-5N6GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
9.299.1GSM184510Pericycle root cells 2hr continuous KNO3 treated, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
9.299.1ArrayExpressE-MEXP-1094-raw-cel-1379507313---
9.299.1GSM131160AtGen_C-10_1-Pi-6_REP1_ATH1GSE5616AtGenExpress: Response to Phytophthora infestansLink to GEO
9.199.1ArrayExpressE-MEXP-807-raw-cel-1173273032---
9.099.1GSM184504Pericycle root cells 2hr KCl control treated, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
8.899.0GSM25871B Treated - 2GSE1491Identification of Inhibitors of Auxin Transcriptional Activation via Chemical Genetics in ArabidopsisLink to GEO
8.899.0GSM272991flu over-tAPX 14-2, biological rep1GSE10812Expression data from thylakoidal ascorbate peroxidase overexpressor Arabidopsis thaliana (Col) rosette leavesLink to GEO
8.799.0ArrayExpressE-MEXP-449-raw-cel-676423362---
8.799.0GSM142836MG001_ATH1_A15-Torres-4N6GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
8.799.0GSM184910Arabidopsis, root cells, columella root cap, 140 mM NaCl, replicate 1GSE7641Expression analysis of root cell-types after treatment with saltLink to GEO



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