Specifically-expressed experiments

Gene ID At5g50570
Gene name squamosa promoter-binding protein, putative
Functional description F:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PM

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
117.999.9GSM128676Underwood_1-29_DC3000-10e8-7h_Rep2_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
94.699.9GSM272991flu over-tAPX 14-2, biological rep1GSE10812Expression data from thylakoidal ascorbate peroxidase overexpressor Arabidopsis thaliana (Col) rosette leavesLink to GEO
79.699.9GSM152141siz1-3 drought 1GSE6583Genome-wide transcriptome analysis of Arabidopsis and siz1-3 response to drought stressLink to GEO
73.499.9GSM272992flu over-tAPX 14-2, biological rep2GSE10812Expression data from thylakoidal ascorbate peroxidase overexpressor Arabidopsis thaliana (Col) rosette leavesLink to GEO
70.399.9GSM152143siz1-3 drought 2GSE6583Genome-wide transcriptome analysis of Arabidopsis and siz1-3 response to drought stressLink to GEO
64.099.8GSM272987flu, biological rep1GSE10812Expression data from thylakoidal ascorbate peroxidase overexpressor Arabidopsis thaliana (Col) rosette leavesLink to GEO
62.399.8GSM152145siz1-3 drought 3GSE6583Genome-wide transcriptome analysis of Arabidopsis and siz1-3 response to drought stressLink to GEO
49.699.8GSM152135Col-0 drought 1GSE6583Genome-wide transcriptome analysis of Arabidopsis and siz1-3 response to drought stressLink to GEO
48.399.8GSM272988flu, biological rep2GSE10812Expression data from thylakoidal ascorbate peroxidase overexpressor Arabidopsis thaliana (Col) rosette leavesLink to GEO
45.299.8GSM152139Col-0 drought 3GSE6583Genome-wide transcriptome analysis of Arabidopsis and siz1-3 response to drought stressLink to GEO
36.599.7GSM128677Underwood_1-30_DC3000-10e8-7h_Rep3_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
35.499.7GSM152137Col-0 drought 2GSE6583Genome-wide transcriptome analysis of Arabidopsis and siz1-3 response to drought stressLink to GEO
35.099.7GSM322555genotype: ataf1-1 mutant, ecotype Col-0 - treated or untreated: Bgh inoculated - rep2GSE12856Penetration resistance: Wildtype and ataf1-1 mutant response to Bgh 12 h after inoculation, 2*2 factorial designLink to GEO
33.599.7GSM128654Underwood_1-7_DC3000-10e6-24h_Rep1_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
28.099.7GSM322556genotype: ataf1-1 mutant, ecotype Col-0 - treated or untreated: Bgh inoculated - rep3GSE12856Penetration resistance: Wildtype and ataf1-1 mutant response to Bgh 12 h after inoculation, 2*2 factorial designLink to GEO
27.299.7GSM128675Underwood_1-28_DC3000-10e8-7h_Rep1_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
25.599.7GSM142844MG001_ATH1_A25-Torres-8N1GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
25.199.6GSM142837MG001_ATH1_A16-Torres-6N1GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
24.199.6GSM339541Environmental regulation of leaf colour in red 35S:PAP1 Arabidopsis -3GSE13469Environmental regulation of leaf colour in red 35S:PAP1 ArabidopsisLink to GEO
22.299.6GSM322549genotype: Wild-type Arabidopsis, ecotype Col-0 - treated or untreated: Bgh inoculated - rep2GSE12856Penetration resistance: Wildtype and ataf1-1 mutant response to Bgh 12 h after inoculation, 2*2 factorial designLink to GEO
20.399.6GSM142855MG001_ATH1_A8-Torres-3N3GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
20.399.6ArrayExpressE-MEXP-449-raw-cel-676423253---
19.699.6ArrayExpressE-MEXP-1329-raw-cel-1556125263---
18.799.5GSM157375Truman_1-3_Pst-DC3000(avrRpm1)-4hpi_Rep1_ATH1GSE6831Systemic response to avirulent bacterial infectionLink to GEO
18.599.5GSM142839MG001_ATH1_A18-Torres-6N6GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
18.499.5ArrayExpressE-MEXP-807-raw-cel-1173273252---
18.299.5GSM205432Col_ leaf_ wildtype_rep01GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG MethylationLink to GEO
18.099.5GSM339543Environmental regulation of leaf colour in red 35S:PAP1 Arabidopsis -5GSE13469Environmental regulation of leaf colour in red 35S:PAP1 ArabidopsisLink to GEO
17.799.5GSM322550genotype: Wild-type Arabidopsis, ecotype Col-0 - treated or untreated: Bgh inoculated - rep3GSE12856Penetration resistance: Wildtype and ataf1-1 mutant response to Bgh 12 h after inoculation, 2*2 factorial designLink to GEO
17.699.5ArrayExpressE-MEXP-1329-raw-cel-1556125298---
17.499.5GSM131608ATGE_42_DGSE5632AtGenExpress: Developmental series (flowers and pollen)Link to GEO
17.399.5GSM205435Col_ leaf_ wildtype_rep02GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG MethylationLink to GEO
16.999.5GSM184516Pericycle root cells 2hr continuous KCl and MSX control treated, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
16.399.5ArrayExpressE-MEXP-1329-raw-cel-1556125333---
15.399.4GSM131492ATGE_101_AGSE5629AtGenExpress: Developmental series (seedlings and whole plants)Link to GEO
15.299.4ArrayExpressE-MEXP-1329-raw-cel-1556125228---
14.499.4GSM131493ATGE_101_BGSE5629AtGenExpress: Developmental series (seedlings and whole plants)Link to GEO
14.299.4GSM128720Pieterse_1-6_avrPstDC3000-24h_Rep1_ATH1GSE5525Transcriptome changes of Arabidopsis during pathogen and insect attackLink to GEO
14.299.4GSM322554genotype: ataf1-1 mutant, ecotype Col-0 - treated or untreated: Bgh inoculated - rep1GSE12856Penetration resistance: Wildtype and ataf1-1 mutant response to Bgh 12 h after inoculation, 2*2 factorial designLink to GEO
13.899.4ArrayExpressE-MEXP-807-raw-cel-1173273144---
13.399.4ArrayExpressE-MEXP-1329-raw-cel-1556125403---
13.399.4GSM142846MG001_ATH1_A27-Torres-9N1GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
13.199.4GSM131603ATGE_41_AGSE5632AtGenExpress: Developmental series (flowers and pollen)Link to GEO
12.799.3GSM128719Pieterse_1-5_avrPstDC3000-12h_Rep1_ATH1GSE5525Transcriptome changes of Arabidopsis during pathogen and insect attackLink to GEO
12.299.3GSM253647Col-0 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
12.299.3GSM142838MG001_ATH1_A17-Torres-6N3GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
11.899.3GSM157363Ulker_2-6_WRKY-KO-13-Pst-DC3000_Rep1_ATH1GSE6829Group II-A WRKY transcription factors and early leaf senescenceLink to GEO
11.799.3GSM131606ATGE_42_BGSE5632AtGenExpress: Developmental series (flowers and pollen)Link to GEO
11.699.3GSM131489ATGE_100_AGSE5629AtGenExpress: Developmental series (seedlings and whole plants)Link to GEO
11.499.3GSM253649Col-0-2GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
11.399.3GSM253648Col-0-1GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
11.199.2GSM322548genotype: Wild-type Arabidopsis, ecotype Col-0 - treated or untreated: Bgh inoculated - rep1GSE12856Penetration resistance: Wildtype and ataf1-1 mutant response to Bgh 12 h after inoculation, 2*2 factorial designLink to GEO
11.099.2GSM131605ATGE_41_CGSE5632AtGenExpress: Developmental series (flowers and pollen)Link to GEO
10.899.2GSM226530LCOLUMELLASBGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular functionLink to GEO
10.799.2GSM131494ATGE_101_CGSE5629AtGenExpress: Developmental series (seedlings and whole plants)Link to GEO
10.699.2GSM142832GM001_ATH1_A9-Torres-3N6_repeat2GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
10.699.2ArrayExpressE-MEXP-1329-raw-cel-1556125438---
10.499.2GSM131474ATGE_22_AGSE5629AtGenExpress: Developmental series (seedlings and whole plants)Link to GEO
10.299.2GSM131607ATGE_42_CGSE5632AtGenExpress: Developmental series (flowers and pollen)Link to GEO
10.199.2GSM184556Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
10.099.2GSM131475ATGE_22_BGSE5629AtGenExpress: Developmental series (seedlings and whole plants)Link to GEO
9.999.1GSM131604ATGE_41_BGSE5632AtGenExpress: Developmental series (flowers and pollen)Link to GEO
9.999.1GSM184530Stele root cells 2hr continuous KNO3 treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
9.899.1ArrayExpressE-MEXP-1329-raw-cel-1556125368---
9.899.1ArrayExpressE-MEXP-449-raw-cel-676423187---
9.499.1GSM131595ATGE_37_BGSE5632AtGenExpress: Developmental series (flowers and pollen)Link to GEO
9.499.1GSM131594ATGE_37_AGSE5632AtGenExpress: Developmental series (flowers and pollen)Link to GEO
9.499.1ArrayExpressE-MEXP-1443-raw-cel-1581869921---
9.399.1GSM157369Ulker_1-5_WRKY-KO-40_Rep1_ATH1GSE6830Group II-A WRKY transcription factors and early leaf senescence (2)Link to GEO
9.399.1GSM131512ATGE_13_CGSE5630AtGenExpress: Developmental series (leaves)Link to GEO
9.199.1GSM184524Stele root cells 2hr KCl control treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
8.999.0GSM184523Stele root cells 2hr KCl control treated, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
8.999.0GSM157378Truman_1-6_Pst-DC3000(avrRpm1)-4hpi_Rep2_ATH1GSE6831Systemic response to avirulent bacterial infectionLink to GEO
8.899.0GSM131513ATGE_14_AGSE5630AtGenExpress: Developmental series (leaves)Link to GEO
8.899.0ArrayExpressE-MEXP-1329-raw-cel-1556125193---
8.899.0GSM131491ATGE_100_CGSE5629AtGenExpress: Developmental series (seedlings and whole plants)Link to GEO
8.899.0GSM131515ATGE_14_CGSE5630AtGenExpress: Developmental series (leaves)Link to GEO
8.899.0ArrayExpressE-MEXP-807-raw-cel-1173273170---
8.699.0GSM184496Endodermis&Pericycle root cells 2hr KCl control treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO



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