Specifically-expressed experiments

Gene ID	At5g50570
Gene name	squamosa promoter-binding protein, putative
Functional description	F:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PM

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
117.9	99.9	GSM128676	Underwood_1-29_DC3000-10e8-7h_Rep2_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
94.6	99.9	GSM272991	flu over-tAPX 14-2, biological rep1	GSE10812	Expression data from thylakoidal ascorbate peroxidase overexpressor Arabidopsis thaliana (Col) rosette leaves
79.6	99.9	GSM152141	siz1-3 drought 1	GSE6583	Genome-wide transcriptome analysis of Arabidopsis and siz1-3 response to drought stress
73.4	99.9	GSM272992	flu over-tAPX 14-2, biological rep2	GSE10812	Expression data from thylakoidal ascorbate peroxidase overexpressor Arabidopsis thaliana (Col) rosette leaves
70.3	99.9	GSM152143	siz1-3 drought 2	GSE6583	Genome-wide transcriptome analysis of Arabidopsis and siz1-3 response to drought stress
64.0	99.8	GSM272987	flu, biological rep1	GSE10812	Expression data from thylakoidal ascorbate peroxidase overexpressor Arabidopsis thaliana (Col) rosette leaves
62.3	99.8	GSM152145	siz1-3 drought 3	GSE6583	Genome-wide transcriptome analysis of Arabidopsis and siz1-3 response to drought stress
49.6	99.8	GSM152135	Col-0 drought 1	GSE6583	Genome-wide transcriptome analysis of Arabidopsis and siz1-3 response to drought stress
48.3	99.8	GSM272988	flu, biological rep2	GSE10812	Expression data from thylakoidal ascorbate peroxidase overexpressor Arabidopsis thaliana (Col) rosette leaves
45.2	99.8	GSM152139	Col-0 drought 3	GSE6583	Genome-wide transcriptome analysis of Arabidopsis and siz1-3 response to drought stress
36.5	99.7	GSM128677	Underwood_1-30_DC3000-10e8-7h_Rep3_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
35.4	99.7	GSM152137	Col-0 drought 2	GSE6583	Genome-wide transcriptome analysis of Arabidopsis and siz1-3 response to drought stress
35.0	99.7	GSM322555	genotype: ataf1-1 mutant, ecotype Col-0 - treated or untreated: Bgh inoculated - rep2	GSE12856	Penetration resistance: Wildtype and ataf1-1 mutant response to Bgh 12 h after inoculation, 2*2 factorial design
33.5	99.7	GSM128654	Underwood_1-7_DC3000-10e6-24h_Rep1_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
28.0	99.7	GSM322556	genotype: ataf1-1 mutant, ecotype Col-0 - treated or untreated: Bgh inoculated - rep3	GSE12856	Penetration resistance: Wildtype and ataf1-1 mutant response to Bgh 12 h after inoculation, 2*2 factorial design
27.2	99.7	GSM128675	Underwood_1-28_DC3000-10e8-7h_Rep1_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
25.5	99.7	GSM142844	MG001_ATH1_A25-Torres-8N1	GSE6176	Impact of Type III effectors on plant defense responses
25.1	99.6	GSM142837	MG001_ATH1_A16-Torres-6N1	GSE6176	Impact of Type III effectors on plant defense responses
24.1	99.6	GSM339541	Environmental regulation of leaf colour in red 35S:PAP1 Arabidopsis -3	GSE13469	Environmental regulation of leaf colour in red 35S:PAP1 Arabidopsis
22.2	99.6	GSM322549	genotype: Wild-type Arabidopsis, ecotype Col-0 - treated or untreated: Bgh inoculated - rep2	GSE12856	Penetration resistance: Wildtype and ataf1-1 mutant response to Bgh 12 h after inoculation, 2*2 factorial design
20.3	99.6	GSM142855	MG001_ATH1_A8-Torres-3N3	GSE6176	Impact of Type III effectors on plant defense responses
20.3	99.6	ArrayExpress	E-MEXP-449-raw-cel-676423253	-	-	-
19.6	99.6	ArrayExpress	E-MEXP-1329-raw-cel-1556125263	-	-	-
18.7	99.5	GSM157375	Truman_1-3_Pst-DC3000(avrRpm1)-4hpi_Rep1_ATH1	GSE6831	Systemic response to avirulent bacterial infection
18.5	99.5	GSM142839	MG001_ATH1_A18-Torres-6N6	GSE6176	Impact of Type III effectors on plant defense responses
18.4	99.5	ArrayExpress	E-MEXP-807-raw-cel-1173273252	-	-	-
18.2	99.5	GSM205432	Col_ leaf_ wildtype_rep01	GSE8279	Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
18.0	99.5	GSM339543	Environmental regulation of leaf colour in red 35S:PAP1 Arabidopsis -5	GSE13469	Environmental regulation of leaf colour in red 35S:PAP1 Arabidopsis
17.7	99.5	GSM322550	genotype: Wild-type Arabidopsis, ecotype Col-0 - treated or untreated: Bgh inoculated - rep3	GSE12856	Penetration resistance: Wildtype and ataf1-1 mutant response to Bgh 12 h after inoculation, 2*2 factorial design
17.6	99.5	ArrayExpress	E-MEXP-1329-raw-cel-1556125298	-	-	-
17.4	99.5	GSM131608	ATGE_42_D	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
17.3	99.5	GSM205435	Col_ leaf_ wildtype_rep02	GSE8279	Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
16.9	99.5	GSM184516	Pericycle root cells 2hr continuous KCl and MSX control treated, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
16.3	99.5	ArrayExpress	E-MEXP-1329-raw-cel-1556125333	-	-	-
15.3	99.4	GSM131492	ATGE_101_A	GSE5629	AtGenExpress: Developmental series (seedlings and whole plants)
15.2	99.4	ArrayExpress	E-MEXP-1329-raw-cel-1556125228	-	-	-
14.4	99.4	GSM131493	ATGE_101_B	GSE5629	AtGenExpress: Developmental series (seedlings and whole plants)
14.2	99.4	GSM128720	Pieterse_1-6_avrPstDC3000-24h_Rep1_ATH1	GSE5525	Transcriptome changes of Arabidopsis during pathogen and insect attack
14.2	99.4	GSM322554	genotype: ataf1-1 mutant, ecotype Col-0 - treated or untreated: Bgh inoculated - rep1	GSE12856	Penetration resistance: Wildtype and ataf1-1 mutant response to Bgh 12 h after inoculation, 2*2 factorial design
13.8	99.4	ArrayExpress	E-MEXP-807-raw-cel-1173273144	-	-	-
13.3	99.4	ArrayExpress	E-MEXP-1329-raw-cel-1556125403	-	-	-
13.3	99.4	GSM142846	MG001_ATH1_A27-Torres-9N1	GSE6176	Impact of Type III effectors on plant defense responses
13.1	99.4	GSM131603	ATGE_41_A	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
12.7	99.3	GSM128719	Pieterse_1-5_avrPstDC3000-12h_Rep1_ATH1	GSE5525	Transcriptome changes of Arabidopsis during pathogen and insect attack
12.2	99.3	GSM253647	Col-0 3	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
12.2	99.3	GSM142838	MG001_ATH1_A17-Torres-6N3	GSE6176	Impact of Type III effectors on plant defense responses
11.8	99.3	GSM157363	Ulker_2-6_WRKY-KO-13-Pst-DC3000_Rep1_ATH1	GSE6829	Group II-A WRKY transcription factors and early leaf senescence
11.7	99.3	GSM131606	ATGE_42_B	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
11.6	99.3	GSM131489	ATGE_100_A	GSE5629	AtGenExpress: Developmental series (seedlings and whole plants)
11.4	99.3	GSM253649	Col-0-2	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
11.3	99.3	GSM253648	Col-0-1	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
11.1	99.2	GSM322548	genotype: Wild-type Arabidopsis, ecotype Col-0 - treated or untreated: Bgh inoculated - rep1	GSE12856	Penetration resistance: Wildtype and ataf1-1 mutant response to Bgh 12 h after inoculation, 2*2 factorial design
11.0	99.2	GSM131605	ATGE_41_C	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
10.8	99.2	GSM226530	LCOLUMELLASB	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
10.7	99.2	GSM131494	ATGE_101_C	GSE5629	AtGenExpress: Developmental series (seedlings and whole plants)
10.6	99.2	GSM142832	GM001_ATH1_A9-Torres-3N6_repeat2	GSE6176	Impact of Type III effectors on plant defense responses
10.6	99.2	ArrayExpress	E-MEXP-1329-raw-cel-1556125438	-	-	-
10.4	99.2	GSM131474	ATGE_22_A	GSE5629	AtGenExpress: Developmental series (seedlings and whole plants)
10.2	99.2	GSM131607	ATGE_42_C	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
10.1	99.2	GSM184556	Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
10.0	99.2	GSM131475	ATGE_22_B	GSE5629	AtGenExpress: Developmental series (seedlings and whole plants)
9.9	99.1	GSM131604	ATGE_41_B	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
9.9	99.1	GSM184530	Stele root cells 2hr continuous KNO3 treated, biological rep3	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
9.8	99.1	ArrayExpress	E-MEXP-1329-raw-cel-1556125368	-	-	-
9.8	99.1	ArrayExpress	E-MEXP-449-raw-cel-676423187	-	-	-
9.4	99.1	GSM131595	ATGE_37_B	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
9.4	99.1	GSM131594	ATGE_37_A	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
9.4	99.1	ArrayExpress	E-MEXP-1443-raw-cel-1581869921	-	-	-
9.3	99.1	GSM157369	Ulker_1-5_WRKY-KO-40_Rep1_ATH1	GSE6830	Group II-A WRKY transcription factors and early leaf senescence (2)
9.3	99.1	GSM131512	ATGE_13_C	GSE5630	AtGenExpress: Developmental series (leaves)
9.1	99.1	GSM184524	Stele root cells 2hr KCl control treated, biological rep3	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
8.9	99.0	GSM184523	Stele root cells 2hr KCl control treated, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
8.9	99.0	GSM157378	Truman_1-6_Pst-DC3000(avrRpm1)-4hpi_Rep2_ATH1	GSE6831	Systemic response to avirulent bacterial infection
8.8	99.0	GSM131513	ATGE_14_A	GSE5630	AtGenExpress: Developmental series (leaves)
8.8	99.0	ArrayExpress	E-MEXP-1329-raw-cel-1556125193	-	-	-
8.8	99.0	GSM131491	ATGE_100_C	GSE5629	AtGenExpress: Developmental series (seedlings and whole plants)
8.8	99.0	GSM131515	ATGE_14_C	GSE5630	AtGenExpress: Developmental series (leaves)
8.8	99.0	ArrayExpress	E-MEXP-807-raw-cel-1173273170	-	-	-
8.6	99.0	GSM184496	Endodermis&Pericycle root cells 2hr KCl control treated, biological rep3	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root

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