Specifically-expressed experiments

Gene ID	At5g49700
Gene name	DNA-binding protein-related
Functional description	F:unknown;P:biological_process unknown;C:unknown;PMBF

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
87.6	99.9	GSM133309	RIKEN-NAKABAYASHI4B	GSE5700	AtGenExpress: Effect of ABA during seed imbibition
85.0	99.9	GSM133306	RIKEN-NAKABAYASHI2B	GSE5700	AtGenExpress: Effect of ABA during seed imbibition
61.3	99.8	GSM184556	Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
60.7	99.8	GSM205185	protoplast_KIN10_rep2	GSE8257	Identification of KIN10-target genes in Arabidopsis mesophyll cells
59.9	99.8	GSM133308	RIKEN-NAKABAYASHI4A	GSE5700	AtGenExpress: Effect of ABA during seed imbibition
59.9	99.8	GSM133304	RIKEN-NAKABAYASHI1B	GSE5700	AtGenExpress: Effect of ABA during seed imbibition
56.4	99.8	GSM13780	Cycloheximide	GSE911	Identification of LEAFY targets during reproductive transition
55.4	99.8	GSM133307	RIKEN-NAKABAYASHI3A	GSE5700	AtGenExpress: Effect of ABA during seed imbibition
54.5	99.8	GSM133310	RIKEN-NAKABAYASHI5B	GSE5700	AtGenExpress: Effect of ABA during seed imbibition
53.6	99.8	ArrayExpress	E-MEXP-807-raw-cel-1173272948	-	-	-
50.8	99.8	GSM13783	Dexamethasone plus cycloheximide - replicate	GSE911	Identification of LEAFY targets during reproductive transition
50.2	99.8	GSM13779	Dexamethasone plus cycloheximide	GSE911	Identification of LEAFY targets during reproductive transition
43.8	99.8	GSM133120	RIKEN-YAMAUCHI2B	GSE5687	AtGenExpress: Different temperature treatment of seeds
41.5	99.8	GSM205159	protoplast_KIN10_rep1	GSE8257	Identification of KIN10-target genes in Arabidopsis mesophyll cells
38.9	99.8	GSM128661	Underwood_1-14_Cor-5x10e7-10h_Rep2_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
37.1	99.7	GSM13784	Cycloheximide - replicate	GSE911	Identification of LEAFY targets during reproductive transition
36.5	99.7	GSM133305	RIKEN-NAKABAYASHI2A	GSE5700	AtGenExpress: Effect of ABA during seed imbibition
34.5	99.7	ArrayExpress	E-MEXP-1299-raw-cel-1519903848	-	-	-
34.2	99.7	GSM142664	NE001_ATH1_A2-Evans-w30	GSE6154	Molecular basis of respiratory burst-mediated thermotolerance in Arabidopsis
29.0	99.7	GSM142667	NE001_ATH1_A5-Evans-m30	GSE6154	Molecular basis of respiratory burst-mediated thermotolerance in Arabidopsis
28.9	99.7	GSM133313	RIKEN-LI2A	GSE5701	AtGenExpress: Basic hormone treatment of seeds
28.6	99.7	GSM204069	protoplast_hypoxia_rep1	GSE8248	Identification of hypoxia-inducible genes in Arabidopsis mesophyll cells
27.6	99.7	GSM133303	RIKEN-NAKABAYASHI1A	GSE5700	AtGenExpress: Effect of ABA during seed imbibition
27.3	99.7	GSM133117	RIKEN-YAMAUCHI1A	GSE5687	AtGenExpress: Different temperature treatment of seeds
25.0	99.6	ArrayExpress	E-MEXP-1468-raw-cel-1591138787	-	-	-
24.8	99.6	GSM133119	RIKEN-YAMAUCHI2A	GSE5687	AtGenExpress: Different temperature treatment of seeds
22.4	99.6	ArrayExpress	E-MEXP-1299-raw-cel-1519902420	-	-	-
22.3	99.6	GSM133319	RIKEN-LI5A	GSE5701	AtGenExpress: Basic hormone treatment of seeds
21.6	99.6	ArrayExpress	E-MEXP-807-raw-cel-1173273032	-	-	-
21.2	99.6	ArrayExpress	E-MEXP-807-raw-cel-1173272832	-	-	-
20.9	99.6	ArrayExpress	E-MEXP-1299-raw-cel-1519902336	-	-	-
20.6	99.6	GSM142777	AM002_ATH1_A2-MCCOR-WDA	GSE6169	Seedling transcriptome affected by a far-red light preconditioning treatment to block chloroplast development.
20.2	99.6	ArrayExpress	E-MEXP-1468-raw-cel-1591138853	-	-	-
20.1	99.6	GSM131706	ATGE_84_A	GSE5634	AtGenExpress: Developmental series (siliques and seeds)
19.7	99.6	GSM142779	AM002_ATH1_A4-MCCOR-GDA	GSE6169	Seedling transcriptome affected by a far-red light preconditioning treatment to block chloroplast development.
19.0	99.5	GSM133317	RIKEN-LI4A	GSE5701	AtGenExpress: Basic hormone treatment of seeds
18.2	99.5	ArrayExpress	E-MEXP-807-raw-cel-1173272921	-	-	-
17.4	99.5	GSM133118	RIKEN-YAMAUCHI1B	GSE5687	AtGenExpress: Different temperature treatment of seeds
17.4	99.5	ArrayExpress	E-MEXP-1725-raw-cel-1669614613	-	-	-
17.3	99.5	ArrayExpress	Capper_1-10_E6_water	-	-	-
16.7	99.5	GSM133311	RIKEN-LI1A	GSE5701	AtGenExpress: Basic hormone treatment of seeds
16.5	99.5	ArrayExpress	E-MEXP-1725-raw-cel-1669614603	-	-	-
16.5	99.5	ArrayExpress	E-MEXP-1468-raw-cel-1591138952	-	-	-
16.3	99.5	ArrayExpress	E-MEXP-1468-raw-cel-1591138886	-	-	-
16.3	99.5	GSM13785	Mock - replicate	GSE911	Identification of LEAFY targets during reproductive transition
15.9	99.5	GSM142773	AM002_ATH1_A8-MCCOR-GDB	GSE6169	Seedling transcriptome affected by a far-red light preconditioning treatment to block chloroplast development.
15.2	99.4	ArrayExpress	E-MEXP-513-raw-cel-829814366	-	-	-
14.9	99.4	ArrayExpress	E-MEXP-1299-raw-cel-1519902871	-	-	-
14.7	99.4	ArrayExpress	E-MEXP-1468-raw-cel-1591138985	-	-	-
14.7	99.4	GSM319208	Dark-grown WT control (vector#1)	GSE12729	Microarray analysis of MINI ZINC FINGER 1 (MIF1) overexpression transgenic Arabidopsis seedlings
14.5	99.4	GSM131705	ATGE_83_C	GSE5634	AtGenExpress: Developmental series (siliques and seeds)
14.5	99.4	ArrayExpress	E-MEXP-513-raw-cel-829814414	-	-	-
14.5	99.4	ArrayExpress	E-MEXP-1299-raw-cel-1519903746	-	-	-
14.4	99.4	GSM142781	AM002_ATH1_A6-MCCOR-WDB	GSE6169	Seedling transcriptome affected by a far-red light preconditioning treatment to block chloroplast development.
14.4	99.4	GSM131179	AtGen_D-11_1-PS_REP1_ATH1	GSE5617	AtGenExpress: Light treatments
14.2	99.4	GSM131702	ATGE_82_C	GSE5634	AtGenExpress: Developmental series (siliques and seeds)
14.2	99.4	GSM133963	Fukuda_1-8_6B_Rep2_ATH1	GSE5748	In vitro tracheary element transdifferentiation of Col-0 suspension cells.
14.1	99.4	GSM131183	AtGen_D-15_1-US_REP1_ATH1	GSE5617	AtGenExpress: Light treatments
13.6	99.4	GSM133947	Murray_2-3_T4-APH_Rep1_ATH1	GSE5747	Genome-wide cell cycle studies
13.5	99.4	GSM133962	Fukuda_1-7_6A_Rep1_ATH1	GSE5748	In vitro tracheary element transdifferentiation of Col-0 suspension cells.
13.4	99.4	GSM131703	ATGE_83_A	GSE5634	AtGenExpress: Developmental series (siliques and seeds)
13.3	99.4	GSM131190	AtGen_D-23_2-UL_REP2_ATH1	GSE5617	AtGenExpress: Light treatments
13.2	99.4	GSM319209	Dark-grown WT control (vector#4)	GSE12729	Microarray analysis of MINI ZINC FINGER 1 (MIF1) overexpression transgenic Arabidopsis seedlings
12.9	99.3	ArrayExpress	Rente_1-1_WS2-HO_Rep1_ATH1	-	-	-
12.8	99.3	ArrayExpress	E-MEXP-513-raw-cel-829814382	-	-	-
12.7	99.3	ArrayExpress	E-MEXP-475-raw-cel-680982485	-	-	-
12.7	99.3	ArrayExpress	E-MEXP-1468-raw-cel-1591139018	-	-	-
12.4	99.3	ArrayExpress	E-MEXP-807-raw-cel-1173273005	-	-	-
12.3	99.3	ArrayExpress	E-MEXP-1299-raw-cel-1519902780	-	-	-
12.1	99.3	GSM204026	protoplast_control_rep1	GSE8248	Identification of hypoxia-inducible genes in Arabidopsis mesophyll cells
12.0	99.3	GSM142772	AM002_ATH1_A7-MCCOR-GFB	GSE6169	Seedling transcriptome affected by a far-red light preconditioning treatment to block chloroplast development.
12.0	99.3	GSM40554	Polysomal mRNA, non-stress	GSE2218	Changes in transcript abundance and association with large polysomes in response to hypoxia stress
11.9	99.3	GSM133321	RIKEN-LI6A	GSE5701	AtGenExpress: Basic hormone treatment of seeds
11.8	99.3	ArrayExpress	E-MEXP-1468-raw-cel-1591138655	-	-	-
11.8	99.3	GSM131182	AtGen_D-14_1-AS_REP1_ATH1	GSE5617	AtGenExpress: Light treatments
11.6	99.3	GSM131707	ATGE_84_B	GSE5634	AtGenExpress: Developmental series (siliques and seeds)
11.5	99.3	ArrayExpress	E-MEXP-1299-raw-cel-1519901992	-	-	-
11.4	99.3	ArrayExpress	E-MEXP-1299-raw-cel-1519903415	-	-	-
11.4	99.3	GSM131196	AtGen_D-30_2-AS_REP2_ATH1	GSE5617	AtGenExpress: Light treatments
11.3	99.3	GSM131708	ATGE_84_D	GSE5634	AtGenExpress: Developmental series (siliques and seeds)
11.2	99.2	ArrayExpress	E-MEXP-475-raw-cel-680982467	-	-	-
11.1	99.2	GSM226272	phyAphyB_Dark_replicate3	GSE8951	A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networks
11.0	99.2	ArrayExpress	Capper_1-9_E6_estradiol	-	-	-
10.9	99.2	GSM142778	AM002_ATH1_A3-MCCOR-GFA	GSE6169	Seedling transcriptome affected by a far-red light preconditioning treatment to block chloroplast development.
10.8	99.2	GSM128755	De Veylder_1-7_E2Fa-Dpa_Rep3_ATH1	GSE5529	Arabidopsis E2F target genes
10.6	99.2	ArrayExpress	E-MEXP-1299-raw-cel-1519901917	-	-	-
10.6	99.2	GSM133948	Murray_2-4_T6-APH_Rep1_ATH1	GSE5747	Genome-wide cell cycle studies
10.5	99.2	GSM128662	Underwood_1-15_Cor-5x10e7-10h_Rep3_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
10.5	99.2	GSM282703	arf2_brz_2	GSE11216	Brassinazole treatment of arf2 and wild-type dark-grown seedlings
10.4	99.2	GSM282698	Col_BRZ_rep2	GSE11216	Brassinazole treatment of arf2 and wild-type dark-grown seedlings
10.4	99.2	GSM131178	AtGen_D-10_1-FS_REP1_ATH1	GSE5617	AtGenExpress: Light treatments
10.3	99.2	GSM131704	ATGE_83_B	GSE5634	AtGenExpress: Developmental series (siliques and seeds)
10.3	99.2	GSM318625	Apex_octa_18DAS_2	GSE12691	Knockdown and overexpression of CIN-TCP genes
10.2	99.2	GSM226275	YHB_Dark_replicate3	GSE8951	A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networks
10.1	99.2	GSM205160	protoplast_controlDNA_rep2	GSE8257	Identification of KIN10-target genes in Arabidopsis mesophyll cells
10.1	99.2	GSM131701	ATGE_82_B	GSE5634	AtGenExpress: Developmental series (siliques and seeds)
10.0	99.2	ArrayExpress	Cornah_1-14_msc_Rep2_ATH1	-	-	-
9.9	99.1	GSM131209	AtGen_D-43_3-PS_REP3_ATH1	GSE5617	AtGenExpress: Light treatments
9.9	99.1	GSM317526	Apex_5DAS_2	GSE12676	Arabidopsis thaliana Ler developmental series
9.8	99.1	GSM317519	Apex_5DAS_1	GSE12676	Arabidopsis thaliana Ler developmental series
9.8	99.1	ArrayExpress	E-ATMX-28-raw-cel-1441104835	-	-	-
9.8	99.1	ArrayExpress	E-MEXP-711-raw-cel-1563002902	-	-	-
9.8	99.1	ArrayExpress	E-MEXP-1468-raw-cel-1591138721	-	-	-
9.7	99.1	GSM131213	AtGen_D-47_3-US_REP3_ATH1	GSE5617	AtGenExpress: Light treatments
9.6	99.1	ArrayExpress	Capper_1-11_E10_estradiol	-	-	-
9.5	99.1	ArrayExpress	E-MEXP-1299-raw-cel-1519902698	-	-	-
9.2	99.1	GSM158703	WT-ESTRADIOL-REP1	GSE6954	Identification of AGL24 downstream genes by using XVE inducible system
9.2	99.1	ArrayExpress	E-MEXP-1468-raw-cel-1591138754	-	-	-
9.2	99.1	GSM131186	AtGen_D-19_2-PL_REP2_ATH1	GSE5617	AtGenExpress: Light treatments
9.2	99.1	GSM134208	Murray_3-4_D7-GROWTH_Rep1_ATH1	GSE5750	Growth of suspension-cultured cells
9.1	99.1	GSM131700	ATGE_82_A	GSE5634	AtGenExpress: Developmental series (siliques and seeds)
9.0	99.1	GSM133965	Fukuda_1-10_8B_Rep2_ATH1	GSE5748	In vitro tracheary element transdifferentiation of Col-0 suspension cells.
8.9	99.0	ArrayExpress	E-ATMX-28-raw-cel-1441104826	-	-	-
8.9	99.0	GSM128754	De Veylder_1-6_E2Fa-Dpa_Rep2_ATH1	GSE5529	Arabidopsis E2F target genes
8.8	99.0	GSM133315	RIKEN-LI3A	GSE5701	AtGenExpress: Basic hormone treatment of seeds
8.8	99.0	GSM142776	AM002_ATH1_A1-MCCOR-WFA	GSE6169	Seedling transcriptome affected by a far-red light preconditioning treatment to block chloroplast development.
8.8	99.0	GSM319210	Dark-grown WT control (vector#7)	GSE12729	Microarray analysis of MINI ZINC FINGER 1 (MIF1) overexpression transgenic Arabidopsis seedlings
8.7	99.0	GSM205156	protoplast_controlDNA_rep1	GSE8257	Identification of KIN10-target genes in Arabidopsis mesophyll cells
8.7	99.0	GSM142775	AM002_ATH1_A10-MCCOR-ADA	GSE6169	Seedling transcriptome affected by a far-red light preconditioning treatment to block chloroplast development.
8.7	99.0	ArrayExpress	E-MEXP-1304-raw-cel-1530618514	-	-	-
8.7	99.0	GSM133966	Fukuda_1-11_10A_Rep1_ATH1	GSE5748	In vitro tracheary element transdifferentiation of Col-0 suspension cells.
8.6	99.0	GSM133723	McCormac_1-1_wildtype-NFtreated_Rep1_ATH1	GSE5726	Seedling transcriptome affected by Norflurazon-induced photobleaching of chloroplasts
8.6	99.0	ArrayExpress	E-MEXP-174-raw-cel-357966600	-	-	-

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