Specifically-expressed experiments

Gene ID	At5g48780
Gene name	disease resistance protein (TIR-NBS class), putative
Functional description	F:transmembrane receptor activity, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane;PBOMFA

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
398.3	100.0	GSM184556	Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
254.8	100.0	GSM184551	Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
180.3	100.0	GSM184537	Whole roots 2hr KCl control treated then frozen, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
177.0	100.0	GSM253645	High_Mo_seg_pool_Ler_col_F2	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
167.8	100.0	GSM253646	Low_Mo_seg_pool_Ler_col_F2	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
124.2	99.9	GSM253649	Col-0-2	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
119.0	99.9	GSM133117	RIKEN-YAMAUCHI1A	GSE5687	AtGenExpress: Different temperature treatment of seeds
107.9	99.9	GSM253651	Ler 1	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
105.4	99.9	GSM253652	Ler 2	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
101.1	99.9	GSM226530	LCOLUMELLASB	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
99.3	99.9	GSM184497	Endodermis&Pericycle root cells 2hr transitory KNO3 treated, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
96.9	99.9	GSM133766	Lindsey_1-18_torpedo-root_Rep3_ATH1	GSE5730	Transcriptional profiling of laser-capture micro-dissected embryonic tissues
95.6	99.9	GSM253647	Col-0 3	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
74.5	99.9	GSM253650	Ler 3	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
70.5	99.9	GSM253648	Col-0-1	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
62.4	99.8	GSM133762	Lindsey_1-14_torpedo-root_Rep1_ATH1	GSE5730	Transcriptional profiling of laser-capture micro-dissected embryonic tissues
55.1	99.8	GSM143299	High_Na_seg_pool_ts_col_F2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
46.7	99.8	GSM143307	Low_Na_seg_pool_tsu_col_F2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
31.7	99.7	GSM133118	RIKEN-YAMAUCHI1B	GSE5687	AtGenExpress: Different temperature treatment of seeds
31.1	99.7	GSM143306	High_Na_seg_pool_tsu_col_F2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
29.8	99.7	GSM205435	Col_ leaf_ wildtype_rep02	GSE8279	Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
29.7	99.7	ArrayExpress	E-MEXP-1138-raw-cel-1432773322	-	-	-
27.7	99.7	GSM143298	Low_Na_seg_pool_ts_col_F2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
27.6	99.7	GSM184482	Lateral Root Cap root cells 2hr continuous KNO3 treated, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
25.6	99.7	ArrayExpress	E-MEXP-1138-raw-cel-1432773258	-	-	-
22.4	99.6	GSM131637	ATGE_73_B	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
21.3	99.6	ArrayExpress	E-MEXP-1138-raw-cel-1432773290	-	-	-
17.9	99.5	GSM131638	ATGE_73_C	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
17.4	99.5	GSM239251	Columbia glabrous (C24) wild type pollen	GSE9408	Identification of putative Arabidopsis DEMETER target genes by GeneChip Analysis
17.0	99.5	GSM131636	ATGE_73_A	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
16.3	99.5	GSM133764	Lindsey_1-16_torpedo-root_Rep2_ATH1	GSE5730	Transcriptional profiling of laser-capture micro-dissected embryonic tissues
16.0	99.5	ArrayExpress	E-ATMX-33-raw-cel-1562596241	-	-	-
15.1	99.4	GSM239253	CaMV::DME pollen	GSE9408	Identification of putative Arabidopsis DEMETER target genes by GeneChip Analysis
14.6	99.4	GSM226531	L1SB	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
12.5	99.3	GSM205364	met1-3_leaf_second-selfed generation_rep01	GSE8279	Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
12.1	99.3	GSM133303	RIKEN-NAKABAYASHI1A	GSE5700	AtGenExpress: Effect of ABA during seed imbibition
11.9	99.3	GSM133304	RIKEN-NAKABAYASHI1B	GSE5700	AtGenExpress: Effect of ABA during seed imbibition
11.2	99.2	ArrayExpress	E-MEXP-1138-raw-cel-1432772810	-	-	-
11.0	99.2	GSM184506	Pericycle root cells 2hr transitory KNO3 treated, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
10.7	99.2	ArrayExpress	E-ATMX-33-raw-cel-1562596197	-	-	-
10.6	99.2	ArrayExpress	E-MEXP-1138-raw-cel-1432772522	-	-	-
10.2	99.2	GSM131591	ATGE_36_A	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
10.1	99.2	ArrayExpress	E-MEXP-1138-raw-cel-1432772586	-	-	-
10.1	99.2	ArrayExpress	E-MEXP-1138-raw-cel-1432772682	-	-	-
10.1	99.2	ArrayExpress	E-MEXP-1138-raw-cel-1432772618	-	-	-
9.7	99.1	ArrayExpress	E-MEXP-1138-raw-cel-1432772778	-	-	-
9.6	99.1	ArrayExpress	E-MEXP-1138-raw-cel-1432773066	-	-	-
9.5	99.1	ArrayExpress	E-MEXP-1138-raw-cel-1432772938	-	-	-
8.9	99.0	ArrayExpress	E-MEXP-1138-raw-cel-1432773034	-	-	-
8.7	99.0	ArrayExpress	E-MEXP-828-raw-cel-1156922296	-	-	-
8.6	99.0	GSM184511	Pericycle root cells 2hr continuous KNO3 treated, biological rep3	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
8.6	99.0	ArrayExpress	E-MEXP-1138-raw-cel-1432772650	-	-	-

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