Specifically-expressed experiments

Gene ID At5g48540
Gene name 33 kDa secretory protein-related
Functional description F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
95.799.9ArrayExpressE-MEXP-807-raw-cel-1173273170---
88.099.9ArrayExpressE-MEXP-807-raw-cel-1173273196---
77.599.9ArrayExpressE-MEXP-807-raw-cel-1173272948---
73.599.9GSM131140AtGen_B-26_2-5-4_REP2_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
65.299.8GSM131112AtGen_B-40_3-5-4_REP3_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
62.099.8ArrayExpressE-MEXP-807-raw-cel-1173273116---
61.299.8ArrayExpressE-MEXP-807-raw-cel-1173273223---
59.199.8GSM131111AtGen_B-39_3-4-4_REP3_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
58.999.8GSM131139AtGen_B-25_2-4-4_REP2_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
50.199.8ArrayExpressE-MEXP-807-raw-cel-1173273252---
49.299.8GSM131126AtGen_B-12_1-5-4_REP1_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
41.999.8GSM142833MG001_ATH1_A10-Torres-5N1GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
41.799.8ArrayExpressE-MEXP-807-raw-cel-1173273060---
41.299.8GSM142852MG001_ATH1_A5-Torres-2N3GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
38.799.8GSM13783Dexamethasone plus cycloheximide - replicateGSE911Identification of LEAFY targets during reproductive transitionLink to GEO
38.499.8GSM142835MG001_ATH1_A13-Torres-4N1GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
37.399.7GSM131141AtGen_B-27_2-6-4_REP2_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
36.399.7GSM13784Cycloheximide - replicateGSE911Identification of LEAFY targets during reproductive transitionLink to GEO
36.099.7ArrayExpressE-MEXP-807-raw-cel-1173273088---
35.899.7GSM142853MG001_ATH1_A6-Torres-2N6GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
35.099.7GSM142851MG001_ATH1_A4-Torres-2N1GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
34.499.7GSM131113AtGen_B-41_3-6-4_REP3_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
33.999.7GSM13780CycloheximideGSE911Identification of LEAFY targets during reproductive transitionLink to GEO
31.899.7GSM13779Dexamethasone plus cycloheximideGSE911Identification of LEAFY targets during reproductive transitionLink to GEO
30.999.7ArrayExpressE-NASC-76-raw-cel-1359879106---
29.999.7GSM131134AtGen_B-20_2-6-1_REP2_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
28.899.7GSM142847MG001_ATH1_A28-Torres-9N1GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
27.999.7GSM133969Birnbaum_1-20_LRC-2_Rep2_ATH1GSE5749A gene expression map of the Arabidopsis rootLink to GEO
26.799.7GSM128672Underwood_1-27_hrpA-10e8-7h_Rep3_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
26.599.7GSM128673Underwood_1-25_hrpA-10e8-7h_Rep1_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
26.599.7ArrayExpressE-MEXP-1094-raw-cel-1379507273---
26.499.7GSM133968Birnbaum_1-19_LRC-1_Rep1_ATH1GSE5749A gene expression map of the Arabidopsis rootLink to GEO
25.799.7GSM131148AtGen_B-34_3-6-1_REP3_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
25.199.6GSM131125AtGen_B-11_1-4-4_REP1_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
24.799.6ArrayExpressE-MEXP-546-raw-cel-863289450---
24.699.6GSM226540L10SBGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular functionLink to GEO
23.599.6GSM134413St.Clair_1-110_375_Van-0_0.02%-silwet_Rep2_ATH1GSE5756Expression Level Polymorphism Project (ELP) - Van-0Link to GEO
22.999.6GSM142849MG001_ATH1_A2-Torres-1N3GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
22.999.6ArrayExpressE-NASC-76-raw-cel-1359878951---
21.699.6GSM184917Arabidopsis, root cells, endodermis and quiescent center, 140 mM NaCl, replicate 2GSE7641Expression analysis of root cell-types after treatment with saltLink to GEO
21.599.6ArrayExpressE-MEXP-807-raw-cel-1173273144---
21.399.6GSM142848MG001_ATH1_A29-Torres-9N3GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
20.999.6GSM131146AtGen_B-32_3-4-1_REP3_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
20.899.6GSM128671Underwood_1-24_hrpAfliC-10e8-7h_Rep3_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
20.799.6GSM131127AtGen_B-13_1-6-4_REP1_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
20.399.6ArrayExpressE-MEXP-546-raw-cel-863289506---
20.299.6GSM128685Underwood_1-38_E.coli-TUV86-2-fliC-10e8-7h_Rep1_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
19.999.6GSM142830GM001_ATH1_A14-Torres-4N3_repeat2GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
19.999.6ArrayExpressE-NASC-76-raw-cel-1359879132---
19.499.6GSM244454Arabidopsis AtMYB30-ox_2-4 h_ Xanthomonas inoculated_biological rep2_exp2GSE9674Expression data from Arabidopsis plants misexpressing AtMYB30 after Xanthomonas inoculation at early timepointsLink to GEO
19.499.6GSM142829GM001_ATH1_A11-Torres-5N3GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
18.499.5GSM142831GM001_ATH1_A30-Torres-9N6_repeat1GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
17.999.5GSM131132AtGen_B-18_2-4-1_REP2_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
17.999.5GSM128687Underwood_1-40_E.coli-TUV86-2-fliC-10e8-7h_Rep3_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
17.899.5ArrayExpressE-NASC-76-raw-cel-1359879184---
17.599.5GSM128686Underwood_1-39_E.coli-TUV86-2-fliC-10e8-7h_Rep2_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
17.599.5GSM134396St.Clair_1-93_349_Tsu-1_0.02%-silwet_Rep3_ATH1GSE5755Expression Level Polymorphism Project (ELP) - Tsu-1Link to GEO
17.099.5ArrayExpressE-MEXP-739-raw-cel-1099467240---
16.599.5ArrayExpressE-MEXP-546-raw-cel-863289404---
16.299.5GSM131133AtGen_B-19_2-5-1_REP2_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
15.999.5GSM128684Underwood_1-37_E.coli-0157-H7-10e8-7h_Rep3_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
15.199.4GSM128682Underwood_1-35_E.coli-0157-H7-10e8-7h_Rep1_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
14.999.4GSM142850MG001_ATH1_A3-Torres-1N6GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
14.499.4GSM128669Underwood_1-22_hrpAfliC-10e8-7h_Rep1_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
14.499.4GSM142840MG001_ATH1_A1-Torres-1N1GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
14.499.4ArrayExpressE-MEXP-1094-raw-cel-1379507313---
14.399.4GSM134359St.Clair_1-20_361_Cvi-1_0.02%-silwet_Rep2_ATH1GSE5753Expression Level Polymorphism Project (ELP) - Cvi-1Link to GEO
14.299.4ArrayExpressE-NASC-76-raw-cel-1359879210---
14.299.4GSM142836MG001_ATH1_A15-Torres-4N6GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
14.099.4ArrayExpressE-MEXP-739-raw-cel-1099467267---
13.899.4GSM142834MG001_ATH1_A12-Torres-5N6GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
13.899.4GSM134369St.Clair_1-30_433_Cvi-1_0.30mM-SA-in-0.02%-silwet_Rep3_ATH1GSE5753Expression Level Polymorphism Project (ELP) - Cvi-1Link to GEO
13.599.4GSM134414St.Clair_1-111_430_Van-0_0.02%-silwet_Rep3_ATH1GSE5756Expression Level Polymorphism Project (ELP) - Van-0Link to GEO
13.599.4GSM128674Underwood_1-26_hrpA-10e8-7h_Rep2_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
13.199.4GSM142837MG001_ATH1_A16-Torres-6N1GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
13.099.4GSM128683Underwood_1-36_E.coli-0157-H7-10e8-7h_Rep2_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
12.899.3ArrayExpressE-MEXP-475-raw-cel-680982458---
12.699.3ArrayExpressE-NASC-76-raw-cel-1359879158---
12.599.3GSM134422St.Clair_1-119_378_Van-0_0.30mM-SA-in-0.02%-silwet_Rep2_ATH1GSE5756Expression Level Polymorphism Project (ELP) - Van-0Link to GEO
12.399.3GSM142838MG001_ATH1_A17-Torres-6N3GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
12.199.3GSM184914Arabidopsis, root cells, cortex, 140 mM NaCl, replicate 2GSE7641Expression analysis of root cell-types after treatment with saltLink to GEO
12.099.3GSM131138AtGen_B-24_2-3-4_REP2_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
12.099.3ArrayExpressE-MEXP-739-raw-cel-1099467249---
11.999.3ArrayExpressE-MEXP-739-raw-cel-1099467276---
11.899.3ArrayExpressE-MEXP-475-raw-cel-680982467---
11.699.3ArrayExpressE-MEXP-547-raw-cel-863346403---
11.599.3GSM134421St.Clair_1-118_348_Van-0_0.30mM-SA-in-0.02%-silwet_Rep1_ATH1GSE5756Expression Level Polymorphism Project (ELP) - Van-0Link to GEO
11.599.3GSM48124Col_8mer3GSE2538Chitin Oligomer ExperimentLink to GEO
11.399.3GSM131119AtGen_B-5_1-5-1_REP_1_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
11.299.2GSM128670Underwood_1-23_hrpAfliC-10e8-7h_Rep2_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
11.199.2ArrayExpressE-NASC-76-raw-cel-1359879028---
11.199.2GSM134403St.Clair_1-100_268b_Tsu-1_0.30mM-SA-in-0.02%-silwet_Rep1_ATH1GSE5755Expression Level Polymorphism Project (ELP) - Tsu-1Link to GEO
10.899.2GSM184913Arabidopsis, root cells, cortex, 140 mM NaCl, replicate 1GSE7641Expression analysis of root cell-types after treatment with saltLink to GEO
10.699.2GSM244458Arabidopsis AtMYB30-as_90-105 min_ Xanthomonas inoculated_biological rep1_exp3GSE9674Expression data from Arabidopsis plants misexpressing AtMYB30 after Xanthomonas inoculation at early timepointsLink to GEO
10.499.2GSM134367St.Clair_1-28_339_Cvi-1_0.30mM-SA-in-0.02%-silwet_Rep1_ATH1GSE5753Expression Level Polymorphism Project (ELP) - Cvi-1Link to GEO
10.399.2GSM134405St.Clair_1-102_350_Tsu-1_0.30mM-SA-in-0.02%-silwet_Rep3_ATH1GSE5755Expression Level Polymorphism Project (ELP) - Tsu-1Link to GEO
10.299.2GSM131147AtGen_B-33_3-5-1_REP3_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
10.199.2GSM244445Arabidopsis wild-type_90-105 min_ Xanthomonas inoculated_biological rep2_exp2GSE9674Expression data from Arabidopsis plants misexpressing AtMYB30 after Xanthomonas inoculation at early timepointsLink to GEO
10.199.2ArrayExpressE-MEXP-1443-raw-cel-1581869745---
10.099.2GSM48127Col_CSC3GSE2538Chitin Oligomer ExperimentLink to GEO
9.899.1GSM48122Col_8mer1GSE2538Chitin Oligomer ExperimentLink to GEO
9.899.1GSM244456Arabidopsis wild-type_90-105 min_ Xanthomonas inoculated_biological rep1_exp3GSE9674Expression data from Arabidopsis plants misexpressing AtMYB30 after Xanthomonas inoculation at early timepointsLink to GEO
9.799.1GSM184635Arabidopsis, root cells, 140 mM NaCl, replicate 2GSE7636Expression analysis of the effect of protoplasting and FACS sorting in rootsLink to GEO
9.699.1GSM134378St.Clair_1-39_394_Est_0.02%-silwet_Rep3_ATH1GSE5754Expression Level Polymorphism Project (ELP) - EstLink to GEO
9.599.1GSM131120AtGen_B-6_1-6-1_REP_1_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
9.599.1GSM244452Arabidopsis AtMYB30-ox_90-105 min_ Xanthomonas inoculated_biological rep2_exp2GSE9674Expression data from Arabidopsis plants misexpressing AtMYB30 after Xanthomonas inoculation at early timepointsLink to GEO
9.499.1GSM184845Arabidopsis, root, longitudinal zone 4, standard conditions, NaCl, replicate 1GSE7639Expression analysis of root developmental zones after treatment with saltLink to GEO
9.399.1GSM131118AtGen_B-4_1-4-1_REP_1_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
9.299.1GSM131282AtGen_6-1622_Cold(4°C)-Roots-24.0h_Rep2GSE5621AtGenExpress: Stress Treatments (Cold stress)Link to GEO
9.299.1GSM131131AtGen_B-17_2-3-1_REP2_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
9.299.1ArrayExpressE-MEXP-1400-raw-cel-1575804127---
9.299.1ArrayExpressE-MEXP-739-raw-cel-1099467258---
9.199.1GSM131318AtGen_6-3322_Saltstress-Roots-3.0h_Rep2GSE5623AtGenExpress: Stress Treatments (Salt stress)Link to GEO
9.099.1ArrayExpressE-MEXP-547-raw-cel-863346457---
8.999.0ArrayExpressE-MEXP-739-raw-cel-1099467285---
8.899.0ArrayExpressE-MEXP-547-raw-cel-863346376---
8.899.0GSM48125Col_CSC1GSE2538Chitin Oligomer ExperimentLink to GEO
8.799.0GSM131317AtGen_6-3321_Saltstress-Roots-3.0h_Rep1GSE5623AtGenExpress: Stress Treatments (Salt stress)Link to GEO
8.799.0ArrayExpressE-NASC-76-raw-cel-1359878900---
8.799.0ArrayExpressE-MEXP-1443-raw-cel-1581869803---



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