Specifically-expressed experiments

Gene ID	At5g48380
Gene name	leucine-rich repeat family protein / protein kinase family protein
Functional description	F:protein binding, protein kinase activity, ATP binding;P:protein amino acid phosphorylation;C:plasma membrane;PMOBFVA

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
24.1	99.6	GSM142852	MG001_ATH1_A5-Torres-2N3	GSE6176	Impact of Type III effectors on plant defense responses
23.3	99.6	GSM128662	Underwood_1-15_Cor-5x10e7-10h_Rep3_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
19.9	99.6	ArrayExpress	E-MEXP-546-raw-cel-863289586	-	-	-
19.9	99.6	GSM128671	Underwood_1-24_hrpAfliC-10e8-7h_Rep3_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
19.7	99.6	GSM128683	Underwood_1-36_E.coli-0157-H7-10e8-7h_Rep2_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
19.2	99.6	GSM133037	2508	GSE5685	AtGenExpress: Pathogen Series: Pseudomonas half leaf injection
18.9	99.5	GSM134369	St.Clair_1-30_433_Cvi-1_0.30mM-SA-in-0.02%-silwet_Rep3_ATH1	GSE5753	Expression Level Polymorphism Project (ELP) - Cvi-1
18.7	99.5	GSM128685	Underwood_1-38_E.coli-TUV86-2-fliC-10e8-7h_Rep1_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
18.3	99.5	GSM244448	Arabidopsis wild-type_6 h_ Xanthomonas inoculated_biological rep1_exp1	GSE9674	Expression data from Arabidopsis plants misexpressing AtMYB30 after Xanthomonas inoculation at early timepoints
18.2	99.5	GSM142853	MG001_ATH1_A6-Torres-2N6	GSE6176	Impact of Type III effectors on plant defense responses
16.9	99.5	GSM244455	Arabidopsis AtMYB30-ox_6 h_ Xanthomonas inoculated_biological rep1_exp1	GSE9674	Expression data from Arabidopsis plants misexpressing AtMYB30 after Xanthomonas inoculation at early timepoints
16.8	99.5	GSM128673	Underwood_1-25_hrpA-10e8-7h_Rep1_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
16.7	99.5	GSM134459	St.Clair_1-84_379_Mt-0_0.30mM-SA-in-0.02%-silwet_Rep3_ATH1	GSE5758	Expression Level Polymorphism Project (ELP) - Mt-0
16.6	99.5	GSM133048	2790	GSE5685	AtGenExpress: Pathogen Series: Pseudomonas half leaf injection
16.6	99.5	GSM133046	2788	GSE5685	AtGenExpress: Pathogen Series: Pseudomonas half leaf injection
16.5	99.5	ArrayExpress	E-MEXP-546-raw-cel-863289424	-	-	-
15.5	99.5	GSM134367	St.Clair_1-28_339_Cvi-1_0.30mM-SA-in-0.02%-silwet_Rep1_ATH1	GSE5753	Expression Level Polymorphism Project (ELP) - Cvi-1
14.9	99.4	GSM142850	MG001_ATH1_A3-Torres-1N6	GSE6176	Impact of Type III effectors on plant defense responses
14.7	99.4	ArrayExpress	E-NASC-76-raw-cel-1359878951	-	-	-
14.6	99.4	GSM133050	2791	GSE5685	AtGenExpress: Pathogen Series: Pseudomonas half leaf injection
14.4	99.4	GSM134457	St.Clair_1-82_294_Mt-0_0.30mM-SA-in-0.02%-silwet_Rep1_ATH1	GSE5758	Expression Level Polymorphism Project (ELP) - Mt-0
14.4	99.4	GSM133051	2793	GSE5685	AtGenExpress: Pathogen Series: Pseudomonas half leaf injection
14.3	99.4	GSM133063	2526	GSE5685	AtGenExpress: Pathogen Series: Pseudomonas half leaf injection
14.1	99.4	GSM134423	St.Clair_1-120_434_Van-0_0.30mM-SA-in-0.02%-silwet_Rep3_ATH1	GSE5756	Expression Level Polymorphism Project (ELP) - Van-0
14.0	99.4	GSM133045	2787	GSE5685	AtGenExpress: Pathogen Series: Pseudomonas half leaf injection
13.9	99.4	GSM142849	MG001_ATH1_A2-Torres-1N3	GSE6176	Impact of Type III effectors on plant defense responses
13.9	99.4	GSM134458	St.Clair_1-83_323_Mt-0_0.30mM-SA-in-0.02%-silwet_Rep2_ATH1	GSE5758	Expression Level Polymorphism Project (ELP) - Mt-0
13.8	99.4	ArrayExpress	E-NASC-76-raw-cel-1359879106	-	-	-
13.7	99.4	GSM128674	Underwood_1-26_hrpA-10e8-7h_Rep2_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
13.4	99.4	GSM128682	Underwood_1-35_E.coli-0157-H7-10e8-7h_Rep1_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
12.8	99.3	GSM128672	Underwood_1-27_hrpA-10e8-7h_Rep3_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
12.8	99.3	ArrayExpress	E-MEXP-739-raw-cel-1099467276	-	-	-
12.6	99.3	GSM133064	2528	GSE5685	AtGenExpress: Pathogen Series: Pseudomonas half leaf injection
12.5	99.3	GSM128670	Underwood_1-23_hrpAfliC-10e8-7h_Rep2_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
12.4	99.3	ArrayExpress	E-MEXP-739-raw-cel-1099467303	-	-	-
12.3	99.3	GSM133053	2794	GSE5685	AtGenExpress: Pathogen Series: Pseudomonas half leaf injection
12.3	99.3	ArrayExpress	E-MEXP-739-raw-cel-1099467285	-	-	-
12.3	99.3	GSM133041	2525	GSE5685	AtGenExpress: Pathogen Series: Pseudomonas half leaf injection
12.2	99.3	GSM128684	Underwood_1-37_E.coli-0157-H7-10e8-7h_Rep3_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
11.9	99.3	ArrayExpress	E-MEXP-739-raw-cel-1099467258	-	-	-
11.8	99.3	GSM128687	Underwood_1-40_E.coli-TUV86-2-fliC-10e8-7h_Rep3_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
11.8	99.3	ArrayExpress	E-MEXP-546-raw-cel-863289450	-	-	-
11.7	99.3	ArrayExpress	E-MEXP-739-raw-cel-1099467267	-	-	-
11.6	99.3	GSM142800	SS001_ATH1_A3-Smith-23	GSE6174	Gene expression and carbohydrate metabolism through the diurnal cycle
11.5	99.3	ArrayExpress	E-NASC-76-raw-cel-1359879132	-	-	-
11.5	99.3	ArrayExpress	E-MEXP-546-raw-cel-863289404	-	-	-
11.4	99.3	GSM134359	St.Clair_1-20_361_Cvi-1_0.02%-silwet_Rep2_ATH1	GSE5753	Expression Level Polymorphism Project (ELP) - Cvi-1
11.4	99.3	GSM128686	Underwood_1-39_E.coli-TUV86-2-fliC-10e8-7h_Rep2_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
11.3	99.3	GSM128660	Underwood_1-13_Cor-5x10e7-10h_Rep1_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
11.1	99.2	GSM131139	AtGen_B-25_2-4-4_REP2_ATH1	GSE5615	AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
11.1	99.2	GSM264765	paraquat 20mM 2h	GSE10464	Expression data from Arabidopsis thaliana (Ler) rosette leaves treated with paraquat (methyl viologen)
11.0	99.2	ArrayExpress	E-MEXP-739-raw-cel-1099467330	-	-	-
10.9	99.2	GSM133821	Yang_1-6_old-pod_Rep3_ATH1	GSE5736	To identify changes in gene expression during silique senescence in Arabidopsis thaliana
10.9	99.2	ArrayExpress	E-MEXP-739-raw-cel-1099467240	-	-	-
10.8	99.2	GSM142830	GM001_ATH1_A14-Torres-4N3_repeat2	GSE6176	Impact of Type III effectors on plant defense responses
10.8	99.2	ArrayExpress	E-MEXP-739-raw-cel-1099467312	-	-	-
10.8	99.2	GSM134350	St.Clair_1-11_333_Col-0_0.30mM-SA-in-0.02%-silwet_Rep2_ATH1	GSE5752	Expression Level Polymorphism Project (ELP) - Col-0
10.7	99.2	GSM142829	GM001_ATH1_A11-Torres-5N3	GSE6176	Impact of Type III effectors on plant defense responses
10.7	99.2	GSM128664	Underwood_1-18_Cor-hrpS-5x10e7-10h_Rep3_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
10.6	99.2	GSM134349	St.Clair_1-10_292b_Col-0_0.30mM-SA-in-0.02%-silwet_Rep1_ATH1	GSE5752	Expression Level Polymorphism Project (ELP) - Col-0
10.5	99.2	GSM131125	AtGen_B-11_1-4-4_REP1_ATH1	GSE5615	AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
10.5	99.2	GSM264764	paraquat 20mM 1h	GSE10464	Expression data from Arabidopsis thaliana (Ler) rosette leaves treated with paraquat (methyl viologen)
10.4	99.2	GSM142854	MG001_ATH1_A7-Torres-3N1	GSE6176	Impact of Type III effectors on plant defense responses
10.4	99.2	GSM134387	St.Clair_1-48_397_Est_0.30mM-SA-in-0.02%-silwet_Rep3_ATH1	GSE5754	Expression Level Polymorphism Project (ELP) - Est
10.4	99.2	ArrayExpress	E-MEXP-546-raw-cel-863289476	-	-	-
10.4	99.2	ArrayExpress	E-MEXP-739-raw-cel-1099467249	-	-	-
10.3	99.2	GSM134208	Murray_3-4_D7-GROWTH_Rep1_ATH1	GSE5750	Growth of suspension-cultured cells
10.2	99.2	GSM134404	St.Clair_1-101_324_Tsu-1_0.30mM-SA-in-0.02%-silwet_Rep2_ATH1	GSE5755	Expression Level Polymorphism Project (ELP) - Tsu-1
10.2	99.2	GSM133054	2796	GSE5685	AtGenExpress: Pathogen Series: Pseudomonas half leaf injection
10.2	99.2	GSM244454	Arabidopsis AtMYB30-ox_2-4 h_ Xanthomonas inoculated_biological rep2_exp2	GSE9674	Expression data from Arabidopsis plants misexpressing AtMYB30 after Xanthomonas inoculation at early timepoints
10.1	99.2	ArrayExpress	E-MEXP-739-raw-cel-1099467321	-	-	-
10.1	99.2	GSM134405	St.Clair_1-102_350_Tsu-1_0.30mM-SA-in-0.02%-silwet_Rep3_ATH1	GSE5755	Expression Level Polymorphism Project (ELP) - Tsu-1
10.1	99.2	GSM142839	MG001_ATH1_A18-Torres-6N6	GSE6176	Impact of Type III effectors on plant defense responses
10.1	99.2	GSM142851	MG001_ATH1_A4-Torres-2N1	GSE6176	Impact of Type III effectors on plant defense responses
10.0	99.2	ArrayExpress	E-MEXP-546-raw-cel-863289506	-	-	-
10.0	99.2	ArrayExpress	E-NASC-76-raw-cel-1359879028	-	-	-
10.0	99.2	GSM133708	Short_1-5_ozone_Rep3_ATH1	GSE5722	Functional Genomics of Ozone Stress in Arabidopsis.
10.0	99.2	GSM264762	Tween 0.1% 2h	GSE10464	Expression data from Arabidopsis thaliana (Ler) rosette leaves treated with paraquat (methyl viologen)
9.9	99.1	GSM128680	Underwood_1-33_Mock-Inoculum-7h_Rep3_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
9.9	99.1	GSM142902	WW001_ATH1_A1-WILLA-CON	GSE6181	Assembly of the cell wall pectic matrix.
9.8	99.1	GSM128719	Pieterse_1-5_avrPstDC3000-12h_Rep1_ATH1	GSE5525	Transcriptome changes of Arabidopsis during pathogen and insect attack
9.8	99.1	ArrayExpress	E-MEXP-739-raw-cel-1099467294	-	-	-
9.7	99.1	GSM322556	genotype: ataf1-1 mutant, ecotype Col-0 - treated or untreated: Bgh inoculated - rep3	GSE12856	Penetration resistance: Wildtype and ataf1-1 mutant response to Bgh 12 h after inoculation, 2*2 factorial design
9.7	99.1	GSM142835	MG001_ATH1_A13-Torres-4N1	GSE6176	Impact of Type III effectors on plant defense responses
9.6	99.1	GSM128663	Underwood_1-16_Cor-hrpS-5x10e7-10h_Rep1_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
9.5	99.1	GSM264761	Tween 0.1% 1h	GSE10464	Expression data from Arabidopsis thaliana (Ler) rosette leaves treated with paraquat (methyl viologen)
9.4	99.1	GSM131111	AtGen_B-39_3-4-4_REP3_ATH1	GSE5615	AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
9.4	99.1	GSM134414	St.Clair_1-111_430_Van-0_0.02%-silwet_Rep3_ATH1	GSE5756	Expression Level Polymorphism Project (ELP) - Van-0
9.3	99.1	GSM142834	MG001_ATH1_A12-Torres-5N6	GSE6176	Impact of Type III effectors on plant defense responses
9.3	99.1	GSM142855	MG001_ATH1_A8-Torres-3N3	GSE6176	Impact of Type III effectors on plant defense responses
9.1	99.1	GSM128669	Underwood_1-22_hrpAfliC-10e8-7h_Rep1_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
9.1	99.1	GSM133058	2506	GSE5685	AtGenExpress: Pathogen Series: Pseudomonas half leaf injection
9.0	99.1	GSM142836	MG001_ATH1_A15-Torres-4N6	GSE6176	Impact of Type III effectors on plant defense responses
9.0	99.1	GSM142831	GM001_ATH1_A30-Torres-9N6_repeat1	GSE6176	Impact of Type III effectors on plant defense responses
9.0	99.1	ArrayExpress	E-NASC-76-raw-cel-1359879210	-	-	-
8.8	99.0	GSM133049	2792	GSE5685	AtGenExpress: Pathogen Series: Pseudomonas half leaf injection
8.8	99.0	ArrayExpress	E-TABM-52-raw-cel-1583682862	-	-	-
8.7	99.0	GSM133065	2529	GSE5685	AtGenExpress: Pathogen Series: Pseudomonas half leaf injection

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