Specifically-expressed experiments

Gene ID	At5g48250
Gene name	zinc finger (B-box type) family protein
Functional description	F:transcription factor activity, zinc ion binding;P:unknown;C:plasma membrane;POM

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
125.4	99.9	GSM131275	AtGen_6-1511_Cold(4°C)-Shoots-12.0h_Rep1	GSE5621	AtGenExpress: Stress Treatments (Cold stress)
115.1	99.9	GSM131276	AtGen_6-1512_Cold(4°C)-Shoots-12.0h_Rep2	GSE5621	AtGenExpress: Stress Treatments (Cold stress)
57.4	99.8	GSM74909	ice1_24H Cold_Rep2	GSE3326	ICE1 regulation of the Arabidopsis Cold-Responsive Transcriptome
56.8	99.8	GSM74900	Wildtype_24H Cold_Rep1	GSE3326	ICE1 regulation of the Arabidopsis Cold-Responsive Transcriptome
55.0	99.8	GSM265851	short 8A	GSE10522	Expression data of Arabidopsis thaliana rosettes during chilling
48.1	99.8	GSM74908	ice1_24H Cold_Rep1	GSE3326	ICE1 regulation of the Arabidopsis Cold-Responsive Transcriptome
47.5	99.8	GSM131278	AtGen_6-1522_Cold(4°C)-Roots-12.0h_Rep2	GSE5621	AtGenExpress: Stress Treatments (Cold stress)
46.9	99.8	GSM74901	Wildtype_24H Cold_Rep2	GSE3326	ICE1 regulation of the Arabidopsis Cold-Responsive Transcriptome
38.0	99.8	GSM265850	short 10A	GSE10522	Expression data of Arabidopsis thaliana rosettes during chilling
33.2	99.7	GSM131277	AtGen_6-1521_Cold(4°C)-Roots-12.0h_Rep1	GSE5621	AtGenExpress: Stress Treatments (Cold stress)
29.6	99.7	GSM131282	AtGen_6-1622_Cold(4°C)-Roots-24.0h_Rep2	GSE5621	AtGenExpress: Stress Treatments (Cold stress)
27.3	99.7	GSM131272	AtGen_6-1412_Cold(4°C)-Shoots-6.0h_Rep2	GSE5621	AtGenExpress: Stress Treatments (Cold stress)
25.8	99.7	GSM131281	AtGen_6-1621_Cold(4°C)-Roots-24.0h_Rep1	GSE5621	AtGenExpress: Stress Treatments (Cold stress)
24.5	99.6	GSM131271	AtGen_6-1411_Cold(4°C)-Shoots-6.0h_Rep1	GSE5621	AtGenExpress: Stress Treatments (Cold stress)
21.8	99.6	ArrayExpress	E-MEXP-67-raw-cel-323396336	-	-	-
21.8	99.6	GSM74899	Wildtype_6H Cold_Rep2	GSE3326	ICE1 regulation of the Arabidopsis Cold-Responsive Transcriptome
18.9	99.5	ArrayExpress	Evans_2-12_fab3-7-8-mut-aeq-cold_ATH1	-	-	-
18.7	99.5	GSM131279	AtGen_6-1611_Cold(4°C)-Shoots-24.0h_Rep1	GSE5621	AtGenExpress: Stress Treatments (Cold stress)
18.7	99.5	ArrayExpress	Evans_2-10_col-aeq-cold_ATH1	-	-	-
17.6	99.5	GSM184537	Whole roots 2hr KCl control treated then frozen, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
17.2	99.5	GSM131280	AtGen_6-1612_Cold(4°C)-Shoots-24.0h_Rep2	GSE5621	AtGenExpress: Stress Treatments (Cold stress)
17.0	99.5	GSM184556	Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
16.7	99.5	ArrayExpress	E-MEXP-67-raw-cel-323396457	-	-	-
16.4	99.5	ArrayExpress	Evans_2-6_fab2-mut-cold_ATH1	-	-	-
16.0	99.5	GSM265849	short 12A	GSE10522	Expression data of Arabidopsis thaliana rosettes during chilling
16.0	99.5	GSM265862	short 10B	GSE10522	Expression data of Arabidopsis thaliana rosettes during chilling
14.6	99.4	ArrayExpress	E-MEXP-1345-raw-cel-1559561289	-	-	-
13.3	99.4	ArrayExpress	E-TABM-52-raw-cel-1583683118	-	-	-
13.1	99.4	GSM184551	Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
12.7	99.3	GSM250987	pmr5 mutant without treatment, biological rep3	GSE9957	Expression profiling of the plant cell wall mutants: pmr5, pmr6 and pmr5 pmr6 double mutants
12.4	99.3	GSM74898	Wildtype_6H Cold_Rep1	GSE3326	ICE1 regulation of the Arabidopsis Cold-Responsive Transcriptome
12.0	99.3	GSM134463	St.Clair_1-88_280_Mt-0_0.30mM-SA-in-0.02%-silwet_Rep1_ATH1	GSE5758	Expression Level Polymorphism Project (ELP) - Mt-0
11.9	99.3	GSM74907	ice1_6H Cold_Rep2	GSE3326	ICE1 regulation of the Arabidopsis Cold-Responsive Transcriptome
11.7	99.3	GSM134454	St.Clair_1-79_276_Mt-0_0.02%-silwet_Rep1_ATH1	GSE5758	Expression Level Polymorphism Project (ELP) - Mt-0
11.5	99.3	ArrayExpress	E-MEXP-1344-raw-cel-1559561623	-	-	-
11.4	99.3	GSM253650	Ler 3	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
11.3	99.3	ArrayExpress	E-MEXP-1345-raw-cel-1559561259	-	-	-
10.9	99.2	GSM253652	Ler 2	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
10.8	99.2	ArrayExpress	Evans_2-8_35s-FAD3-cold_ATH1	-	-	-
10.7	99.2	GSM250985	pmr5 mutant without treatment, biological rep1	GSE9957	Expression profiling of the plant cell wall mutants: pmr5, pmr6 and pmr5 pmr6 double mutants
10.6	99.2	GSM134346	St.Clair_1-7_273b_Col-0_0.02%-silwet_Rep1_ATH1	GSE5752	Expression Level Polymorphism Project (ELP) - Col-0
10.4	99.2	GSM265863	short 8B	GSE10522	Expression data of Arabidopsis thaliana rosettes during chilling
10.3	99.2	ArrayExpress	E-TABM-52-raw-cel-1583683326	-	-	-
10.2	99.2	GSM133407	Bramke_A1-warre-WTC	GSE5711	Cold induced changes: differences between the Arabidopsis thaliana wild type and freezing sensitive mutants.
10.0	99.2	GSM253648	Col-0-1	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
10.0	99.2	GSM134375	St.Clair_1-36_454b_Cvi-1_0.30mM-SA-in-0.02%-silwet_Rep3_ATH1	GSE5753	Expression Level Polymorphism Project (ELP) - Cvi-1
10.0	99.2	GSM134355	St.Clair_1-16_277b_Col-0_0.30mM-SA-in-0.02%-silwet_Rep1_ATH1	GSE5752	Expression Level Polymorphism Project (ELP) - Col-0
9.8	99.1	GSM133773	Lindsey_1-25_torpedo-meristem_Rep1_ATH1	GSE5730	Transcriptional profiling of laser-capture micro-dissected embryonic tissues
9.7	99.1	GSM134391	St.Clair_1-52_279b_Est_0.30mM-SA-in-0.02%-silwet_Rep1_ATH1	GSE5754	Expression Level Polymorphism Project (ELP) - Est
9.6	99.1	GSM253646	Low_Mo_seg_pool_Ler_col_F2	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
9.5	99.1	GSM134366	St.Clair_1-27_449_Cvi-1_0.02%-silwet_Rep3_ATH1	GSE5753	Expression Level Polymorphism Project (ELP) - Cvi-1
9.3	99.1	GSM250983	Col-0 without treatment, biological rep2	GSE9957	Expression profiling of the plant cell wall mutants: pmr5, pmr6 and pmr5 pmr6 double mutants
9.3	99.1	ArrayExpress	E-MEXP-1345-raw-cel-1559561229	-	-	-
9.2	99.1	GSM133737	Buchanan-Wollaston_A-9-bwoll-Co1_SLD	GSE5727	The effects of mutants in stress response pathways on gene expression during senescence
9.1	99.1	GSM134373	St.Clair_1-34_346_Cvi-1_0.30mM-SA-in-0.02%-silwet_Rep1_ATH1	GSE5753	Expression Level Polymorphism Project (ELP) - Cvi-1
9.1	99.1	GSM131222	Kadalayil_1-2_Pasta2M1.1_Rep1_ATH1	GSE5619	Functional studies of a new Arabidopsis SH2 domain-containing gene
8.9	99.0	GSM134379	St.Clair_1-40_285_Est_0.02%-silwet_Rep1_ATH1	GSE5754	Expression Level Polymorphism Project (ELP) - Est
8.9	99.0	ArrayExpress	E-TABM-52-raw-cel-1583683438	-	-	-
8.8	99.0	ArrayExpress	E-TABM-61-raw-cel-683343592	-	-	-

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