Specifically-expressed experiments

Gene ID	At5g45110
Gene name	NPR3 (NPR1-LIKE PROTEIN 3)
Functional description	Encodes a paralog of NPR1. Involved in negative regulation of defense responses against bacterial and oomycete pathogens. npr3 mutants has elevated level of PR1 expression. Interacts with TGA2, TGA3, TGA5 and TGA6 in yeast two hybrid assays.

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
71.6	99.9	GSM184520	Pericycle root cells 2hr continuous KNO3 and MSX treated, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
71.1	99.9	GSM184912	Arabidopsis, root cells, columella root cap, 140 mM NaCl, replicate 3	GSE7641	Expression analysis of root cell-types after treatment with salt
48.9	99.8	GSM184516	Pericycle root cells 2hr continuous KCl and MSX control treated, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
48.5	99.8	GSM128662	Underwood_1-15_Cor-5x10e7-10h_Rep3_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
47.4	99.8	GSM184922	Arabidopsis, root cells, protophloem, 140 mM NaCl, replicate 1	GSE7641	Expression analysis of root cell-types after treatment with salt
44.8	99.8	GSM184910	Arabidopsis, root cells, columella root cap, 140 mM NaCl, replicate 1	GSE7641	Expression analysis of root cell-types after treatment with salt
41.0	99.8	GSM128676	Underwood_1-29_DC3000-10e8-7h_Rep2_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
39.8	99.8	GSM184521	Pericycle root cells 2hr continuous KNO3 and MSX treated, biological rep3	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
37.4	99.7	GSM184918	Arabidopsis, root cells, endodermis and quiescent center, 140 mM NaCl, replicate 3	GSE7641	Expression analysis of root cell-types after treatment with salt
37.2	99.7	GSM218594	Whole roots 3.5hr KNO3 treated then frozen, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
36.5	99.7	GSM184499	Endodermis&Pericycle root cells 2hr transitory KNO3 treated, biological rep3	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
34.6	99.7	GSM128677	Underwood_1-30_DC3000-10e8-7h_Rep3_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
30.6	99.7	GSM184559	Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes with KNO3, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
29.2	99.7	GSM266676	Arabidopsis, root cells, stele, -Fe, replicate 2	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
28.7	99.7	GSM184519	Pericycle root cells 2hr continuous KNO3 and MSX treated, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
28.1	99.7	GSM131342	AtGen_6-4222_Droughtstress-Roots-1.0h_Rep2	GSE5624	AtGenExpress: Stress Treatments (Drought stress)
28.0	99.7	GSM184921	Arabidopsis, root cells, stele, 140 mM NaCls, replicate 3	GSE7641	Expression analysis of root cell-types after treatment with salt
27.9	99.7	GSM184899	Arabidopsis, root cells, endodermis and quiescent center, standard conditions, replicate 2	GSE7641	Expression analysis of root cell-types after treatment with salt
27.8	99.7	GSM218587	Pericycle root cells 2hr continuous KNO3 and MSX and Gln treated, biological rep3	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
27.7	99.7	GSM184530	Stele root cells 2hr continuous KNO3 treated, biological rep3	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
27.6	99.7	GSM131338	AtGen_6-4122_Droughtstress-Roots-0.5h_Rep2	GSE5624	AtGenExpress: Stress Treatments (Drought stress)
26.4	99.7	GSM266668	Arabidopsis, root cells, columella root cap, -Fe, replicate 3	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
24.0	99.6	GSM131337	AtGen_6-4121_Droughtstress-Roots-0.5h_Rep1	GSE5624	AtGenExpress: Stress Treatments (Drought stress)
23.8	99.6	GSM184897	Arabidopsis, root cells, cortex, standard conditions, replicate 3	GSE7641	Expression analysis of root cell-types after treatment with salt
23.8	99.6	ArrayExpress	E-MEXP-1443-raw-cel-1581869745	-	-	-
23.3	99.6	GSM184896	Arabidopsis, root cells, cortex, standard conditions, replicate 2	GSE7641	Expression analysis of root cell-types after treatment with salt
21.9	99.6	GSM184494	Endodermis&Pericycle root cells 2hr KCl control treated, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
21.6	99.6	GSM142846	MG001_ATH1_A27-Torres-9N1	GSE6176	Impact of Type III effectors on plant defense responses
21.5	99.6	GSM134369	St.Clair_1-30_433_Cvi-1_0.30mM-SA-in-0.02%-silwet_Rep3_ATH1	GSE5753	Expression Level Polymorphism Project (ELP) - Cvi-1
21.3	99.6	ArrayExpress	E-MEXP-1443-raw-cel-1581869803	-	-	-
21.1	99.6	GSM184911	Arabidopsis, root cells, columella root cap, 140 mM NaCl, replicate 2	GSE7641	Expression analysis of root cell-types after treatment with salt
21.0	99.6	GSM142653	MC002_ATH1_A11.1-dubos-mxh	GSE6151	The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
20.1	99.6	GSM218586	Pericycle root cells 2hr continuous KNO3 and MSX and Gln treated, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
20.1	99.6	GSM184900	Arabidopsis, root cells, endodermis and quiescent center, standard conditions, replicate 3	GSE7641	Expression analysis of root cell-types after treatment with salt
19.9	99.6	GSM131318	AtGen_6-3322_Saltstress-Roots-3.0h_Rep2	GSE5623	AtGenExpress: Stress Treatments (Salt stress)
19.8	99.6	GSM142655	MC002_ATH1_A11.3-dubos-mxh	GSE6151	The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
19.8	99.6	GSM184539	Whole roots 2hr KCl control treated then frozen, biological rep3	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
19.8	99.6	GSM133988	Birnbaum_1-18_wol-3_Rep3_ATH1	GSE5749	A gene expression map of the Arabidopsis root
19.6	99.6	GSM128713	Thorlby_1-2_3h-post-freeze_REP3_ATH1	GSE5524	Gene Expression During Recovery from Freezing
19.3	99.6	GSM184894	Arabidopsis, root cells, columella root cap, standard conditions, replicate 3	GSE7641	Expression analysis of root cell-types after treatment with salt
18.5	99.5	GSM266667	Arabidopsis, root cells, columella root cap, -Fe, replicate 2	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
18.2	99.5	GSM184898	Arabidopsis, root cells, endodermis and quiescent center, standard conditions, replicate 1	GSE7641	Expression analysis of root cell-types after treatment with salt
17.8	99.5	GSM134359	St.Clair_1-20_361_Cvi-1_0.02%-silwet_Rep2_ATH1	GSE5753	Expression Level Polymorphism Project (ELP) - Cvi-1
17.8	99.5	GSM131341	AtGen_6-4221_Droughtstress-Roots-1.0h_Rep1	GSE5624	AtGenExpress: Stress Treatments (Drought stress)
17.6	99.5	GSM184557	Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep3	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
17.5	99.5	GSM25868	A treated - 3	GSE1491	Identification of Inhibitors of Auxin Transcriptional Activation via Chemical Genetics in Arabidopsis
17.4	99.5	GSM131273	AtGen_6-1421_Cold(4°C)-Roots-6.0h_Rep1	GSE5621	AtGenExpress: Stress Treatments (Cold stress)
17.3	99.5	GSM142879	GW001_ATH1_A24-Warre-03f	GSE6177	The effects of the sfr2, sfr3 and sfr6 mutations on lyotropic stress responses
17.1	99.5	GSM184924	Arabidopsis, root cells, protophloem, 140 mM NaCl, replicate 3	GSE7641	Expression analysis of root cell-types after treatment with salt
17.1	99.5	GSM184501	Endodermis&Pericycle root cells 2hr continuous KNO3 treated, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
17.1	99.5	GSM184508	Pericycle root cells 2hr transitory KNO3 treated, biological rep3	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
17.0	99.5	GSM134367	St.Clair_1-28_339_Cvi-1_0.30mM-SA-in-0.02%-silwet_Rep1_ATH1	GSE5753	Expression Level Polymorphism Project (ELP) - Cvi-1
16.5	99.5	GSM131314	AtGen_6-3222_Saltstress-Roots-1.0h_Rep2	GSE5623	AtGenExpress: Stress Treatments (Salt stress)
16.4	99.5	GSM184496	Endodermis&Pericycle root cells 2hr KCl control treated, biological rep3	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
16.4	99.5	GSM184892	Arabidopsis, root cells, columella root cap, standard conditions, replicate 1	GSE7641	Expression analysis of root cell-types after treatment with salt
16.3	99.5	GSM142654	MC002_ATH1_A11.2-dubos-mxh	GSE6151	The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
16.2	99.5	GSM128661	Underwood_1-14_Cor-5x10e7-10h_Rep2_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
15.9	99.5	GSM133974	Birnbaum_1-4_StageI-1_Rep1_ATH1	GSE5749	A gene expression map of the Arabidopsis root
15.7	99.5	GSM184635	Arabidopsis, root cells, 140 mM NaCl, replicate 2	GSE7636	Expression analysis of the effect of protoplasting and FACS sorting in roots
14.7	99.4	GSM266666	Arabidopsis, root cells, columella root cap, -Fe, replicate 1	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
14.7	99.4	GSM184893	Arabidopsis, root cells, columella root cap, standard conditions, replicate 2	GSE7641	Expression analysis of root cell-types after treatment with salt
14.5	99.4	GSM134351	St.Clair_1-12_407_Col-0_0.30mM-SA-in-0.02%-silwet_Rep3_ATH1	GSE5752	Expression Level Polymorphism Project (ELP) - Col-0
14.5	99.4	GSM133987	Birnbaum_1-17_wol-2_Rep2_ATH1	GSE5749	A gene expression map of the Arabidopsis root
14.5	99.4	GSM142845	MG001_ATH1_A26-Torres-8N3	GSE6176	Impact of Type III effectors on plant defense responses
14.4	99.4	GSM184517	Pericycle root cells 2hr continuous KCl and MSX control treated, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
14.3	99.4	GSM142878	GW001_ATH1_A23-Warre-03f	GSE6177	The effects of the sfr2, sfr3 and sfr6 mutations on lyotropic stress responses
14.2	99.4	GSM184500	Endodermis&Pericycle root cells 2hr continuous KNO3 treated, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
14.0	99.4	GSM131213	AtGen_D-47_3-US_REP3_ATH1	GSE5617	AtGenExpress: Light treatments
13.9	99.4	GSM184518	Pericycle root cells 2hr continuous KCl and MSX control treated, biological rep3	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
13.8	99.4	GSM142837	MG001_ATH1_A16-Torres-6N1	GSE6176	Impact of Type III effectors on plant defense responses
13.6	99.4	GSM142836	MG001_ATH1_A15-Torres-4N6	GSE6176	Impact of Type III effectors on plant defense responses
13.5	99.4	GSM142838	MG001_ATH1_A17-Torres-6N3	GSE6176	Impact of Type III effectors on plant defense responses
13.1	99.4	GSM39197	RRE1_Chitin3	GSE2169	rre1 and rre2 mutants
13.1	99.4	GSM184545	Whole roots 2hr KNO3 treated then frozen, biological rep3	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
13.0	99.4	GSM266677	Arabidopsis, root cells, stele, -Fe, replicate 3	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
13.0	99.4	GSM131277	AtGen_6-1521_Cold(4°C)-Roots-12.0h_Rep1	GSE5621	AtGenExpress: Stress Treatments (Cold stress)
13.0	99.4	GSM131309	AtGen_6-3121_Saltstress-Roots-0.5h_Rep1	GSE5623	AtGenExpress: Stress Treatments (Salt stress)
12.5	99.3	GSM134349	St.Clair_1-10_292b_Col-0_0.30mM-SA-in-0.02%-silwet_Rep1_ATH1	GSE5752	Expression Level Polymorphism Project (ELP) - Col-0
12.5	99.3	GSM131321	AtGen_6-3421_Saltstress-Roots-6.0h_Rep1	GSE5623	AtGenExpress: Stress Treatments (Salt stress)
12.4	99.3	GSM128660	Underwood_1-13_Cor-5x10e7-10h_Rep1_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
12.4	99.3	GSM184919	Arabidopsis, root cells, stele, 140 mM NaCls, replicate 1	GSE7641	Expression analysis of root cell-types after treatment with salt
12.4	99.3	GSM184917	Arabidopsis, root cells, endodermis and quiescent center, 140 mM NaCl, replicate 2	GSE7641	Expression analysis of root cell-types after treatment with salt
11.9	99.3	GSM131269	AtGen_6-1321_Cold(4°C)-Roots-3.0h_Rep1	GSE5621	AtGenExpress: Stress Treatments (Cold stress)
11.9	99.3	GSM184909	Arabidopsis, root cells, epidermis and lateral root cap, 140 mM NaCl, replicate 3	GSE7641	Expression analysis of root cell-types after treatment with salt
11.9	99.3	GSM25866	A Treated - 1	GSE1491	Identification of Inhibitors of Auxin Transcriptional Activation via Chemical Genetics in Arabidopsis
11.7	99.3	GSM142902	WW001_ATH1_A1-WILLA-CON	GSE6181	Assembly of the cell wall pectic matrix.
11.6	99.3	GSM131317	AtGen_6-3321_Saltstress-Roots-3.0h_Rep1	GSE5623	AtGenExpress: Stress Treatments (Salt stress)
11.5	99.3	GSM184927	Arabidopsis, whole roots, 140 mM NaCl, 30 minutes, replicate 1	GSE7642	Time course expression analysis of the salt stress response in Arabidopsis roots
11.5	99.3	GSM131285	AtGen_6-2121_Osmoticstress-Roots-0.5h_Rep1	GSE5622	AtGenExpress: Stress Treatments (Osmotic stress)
11.5	99.3	GSM131313	AtGen_6-3221_Saltstress-Roots-1.0h_Rep1	GSE5623	AtGenExpress: Stress Treatments (Salt stress)
11.4	99.3	GSM184923	Arabidopsis, root cells, protophloem, 140 mM NaCl, replicate 2	GSE7641	Expression analysis of root cell-types after treatment with salt
11.2	99.2	GSM128719	Pieterse_1-5_avrPstDC3000-12h_Rep1_ATH1	GSE5525	Transcriptome changes of Arabidopsis during pathogen and insect attack
11.2	99.2	GSM39196	RRE1_Chitin2	GSE2169	rre1 and rre2 mutants
11.1	99.2	GSM142844	MG001_ATH1_A25-Torres-8N1	GSE6176	Impact of Type III effectors on plant defense responses
11.0	99.2	ArrayExpress	E-MEXP-1443-raw-cel-1581869921	-	-	-
10.9	99.2	GSM339543	Environmental regulation of leaf colour in red 35S:PAP1 Arabidopsis -5	GSE13469	Environmental regulation of leaf colour in red 35S:PAP1 Arabidopsis
10.9	99.2	GSM184502	Endodermis&Pericycle root cells 2hr continuous KNO3 treated, biological rep3	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
10.6	99.2	GSM128664	Underwood_1-18_Cor-hrpS-5x10e7-10h_Rep3_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
10.5	99.2	GSM142839	MG001_ATH1_A18-Torres-6N6	GSE6176	Impact of Type III effectors on plant defense responses
10.5	99.2	GSM131322	AtGen_6-3422_Saltstress-Roots-6.0h_Rep2	GSE5623	AtGenExpress: Stress Treatments (Salt stress)
10.5	99.2	GSM184903	Arabidopsis, root cells, stele, standard conditions, replicate 3	GSE7641	Expression analysis of root cell-types after treatment with salt
10.5	99.2	GSM131229	AtGen_6-0721_Control-Roots-0.25h_Rep1	GSE5620	AtGenExpress: Stress Treatments (Control plants)
10.4	99.2	GSM184495	Endodermis&Pericycle root cells 2hr KCl control treated, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
10.3	99.2	GSM39204	Col_Chitin2	GSE2169	rre1 and rre2 mutants
10.2	99.2	GSM25869	A Treated - 4	GSE1491	Identification of Inhibitors of Auxin Transcriptional Activation via Chemical Genetics in Arabidopsis
10.0	99.2	GSM131334	AtGen_6-4722_Droughtstress-Roots-0.25h_Rep2	GSE5624	AtGenExpress: Stress Treatments (Drought stress)
10.0	99.2	ArrayExpress	E-MEXP-546-raw-cel-863289586	-	-	-
9.8	99.1	GSM134350	St.Clair_1-11_333_Col-0_0.30mM-SA-in-0.02%-silwet_Rep2_ATH1	GSE5752	Expression Level Polymorphism Project (ELP) - Col-0
9.8	99.1	GSM133986	Birnbaum_1-16_wol-1_Rep1_ATH1	GSE5749	A gene expression map of the Arabidopsis root
9.6	99.1	GSM39212	RRE2_Chitin2	GSE2169	rre1 and rre2 mutants
9.6	99.1	GSM184493	Epidermis&Cortex root cells 2hr continuous KNO3 treated, biological rep3	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
9.6	99.1	ArrayExpress	E-MEXP-1443-raw-cel-1581869863	-	-	-
9.6	99.1	GSM131333	AtGen_6-4721_Droughtstress-Roots-0.25h_Rep1	GSE5624	AtGenExpress: Stress Treatments (Drought stress)
9.6	99.1	GSM184505	Pericycle root cells 2hr KCl control treated, biological rep3	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
9.5	99.1	GSM25870	B Treated - 1	GSE1491	Identification of Inhibitors of Auxin Transcriptional Activation via Chemical Genetics in Arabidopsis
9.5	99.1	GSM184533	Protoplasted root cells 2hr KCl control treated, biological rep3	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
9.3	99.1	GSM266672	Arabidopsis, root cells, endodermis and quiescent center, -Fe, replicate 1	GSE10501	Expression analysis of root cell-types after iron deficiency (-Fe) treatment
9.1	99.1	GSM142832	GM001_ATH1_A9-Torres-3N6_repeat2	GSE6176	Impact of Type III effectors on plant defense responses
8.9	99.0	GSM131183	AtGen_D-15_1-US_REP1_ATH1	GSE5617	AtGenExpress: Light treatments
8.9	99.0	GSM131274	AtGen_6-1422_Cold(4°C)-Roots-6.0h_Rep2	GSE5621	AtGenExpress: Stress Treatments (Cold stress)
8.9	99.0	GSM184929	Arabidopsis, whole roots, 140 mM NaCl, 1 hour, replicate 1	GSE7642	Time course expression analysis of the salt stress response in Arabidopsis roots
8.9	99.0	ArrayExpress	E-MEXP-546-raw-cel-863289424	-	-	-
8.8	99.0	GSM131366	AtGen_6-5222_Genotoxicstress-Roots-1.0h_Rep2	GSE5625	AtGenExpress: Stress Treatments (Genotoxic stress)
8.8	99.0	GSM25873	IAA/A Treated - 1	GSE1491	Identification of Inhibitors of Auxin Transcriptional Activation via Chemical Genetics in Arabidopsis
8.8	99.0	GSM131361	AtGen_6-5121_Genotoxicstress-Roots-0.5h_Rep1	GSE5625	AtGenExpress: Stress Treatments (Genotoxic stress)
8.7	99.0	GSM128648	Underwood_1-1_Cor-10e6-24h_Rep1_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
8.7	99.0	GSM205159	protoplast_KIN10_rep1	GSE8257	Identification of KIN10-target genes in Arabidopsis mesophyll cells

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