Specifically-expressed experiments

Gene ID At5g44910
Gene name Toll-Interleukin-Resistance (TIR) domain-containing protein
Functional description F:transmembrane receptor activity;P:signal transduction, defense response, innate immune response;C:intrinsic to membrane;P

Click GSM ID or Assay name to show a list of genes that are specifically expressed in the GSM.

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
168.5100.0GSM226530LCOLUMELLASBGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular functionLink to GEO
135.899.9GSM142852MG001_ATH1_A5-Torres-2N3GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
119.599.9ArrayExpressE-MEXP-1094-raw-cel-1379507313---
109.199.9ArrayExpressE-MEXP-807-raw-cel-1173272948---
103.599.9GSM142851MG001_ATH1_A4-Torres-2N1GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
100.899.9GSM13784Cycloheximide - replicateGSE911Identification of LEAFY targets during reproductive transitionLink to GEO
99.399.9ArrayExpressE-MEXP-807-raw-cel-1173273116---
80.899.9ArrayExpressE-MEXP-1094-raw-cel-1379507273---
77.399.9GSM142853MG001_ATH1_A6-Torres-2N6GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
74.399.9ArrayExpressE-MEXP-807-raw-cel-1173273060---
70.799.9GSM205430met1-3_leaf_fourth-selfed generation_rep02GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG MethylationLink to GEO
66.299.8ArrayExpressE-MEXP-1094-raw-cel-1379507233---
65.099.8GSM128686Underwood_1-39_E.coli-TUV86-2-fliC-10e8-7h_Rep2_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
61.799.8ArrayExpressE-MEXP-1094-raw-cel-1379507553---
60.399.8GSM13783Dexamethasone plus cycloheximide - replicateGSE911Identification of LEAFY targets during reproductive transitionLink to GEO
57.799.8ArrayExpressE-MEXP-807-raw-cel-1173273223---
57.099.8GSM131318AtGen_6-3322_Saltstress-Roots-3.0h_Rep2GSE5623AtGenExpress: Stress Treatments (Salt stress)Link to GEO
57.099.8ArrayExpressE-MEXP-1094-raw-cel-1379507513---
49.499.8GSM131321AtGen_6-3421_Saltstress-Roots-6.0h_Rep1GSE5623AtGenExpress: Stress Treatments (Salt stress)Link to GEO
46.299.8GSM13779Dexamethasone plus cycloheximideGSE911Identification of LEAFY targets during reproductive transitionLink to GEO
44.399.8GSM131322AtGen_6-3422_Saltstress-Roots-6.0h_Rep2GSE5623AtGenExpress: Stress Treatments (Salt stress)Link to GEO
41.799.8ArrayExpressE-MEXP-1094-raw-cel-1379507193---
39.199.8ArrayExpressE-NASC-76-raw-cel-1359879132---
38.299.8GSM205428met1-3_leaf_fourth-selfed generation_rep01GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG MethylationLink to GEO
37.999.8ArrayExpressE-NASC-76-raw-cel-1359879158---
37.999.8GSM13780CycloheximideGSE911Identification of LEAFY targets during reproductive transitionLink to GEO
37.099.7GSM205364met1-3_leaf_second-selfed generation_rep01GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG MethylationLink to GEO
33.099.7GSM131325AtGen_6-3521_Saltstress-Roots-12.0h_Rep1GSE5623AtGenExpress: Stress Treatments (Salt stress)Link to GEO
32.099.7GSM205426met1-3_leaf_second-selfed generation_rep02GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG MethylationLink to GEO
29.999.7GSM142849MG001_ATH1_A2-Torres-1N3GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
29.999.7GSM131317AtGen_6-3321_Saltstress-Roots-3.0h_Rep1GSE5623AtGenExpress: Stress Treatments (Salt stress)Link to GEO
29.699.7ArrayExpressE-NASC-76-raw-cel-1359879106---
29.599.7GSM131113AtGen_B-41_3-6-4_REP3_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
28.699.7ArrayExpressE-MEXP-807-raw-cel-1173273088---
28.099.7ArrayExpressE-NASC-76-raw-cel-1359878900---
27.499.7GSM142833MG001_ATH1_A10-Torres-5N1GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
27.399.7ArrayExpressE-MEXP-547-raw-cel-863346457---
26.899.7GSM253646Low_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
26.599.7GSM48125Col_CSC1GSE2538Chitin Oligomer ExperimentLink to GEO
25.599.7ArrayExpressE-NASC-76-raw-cel-1359878976---
25.299.6ArrayExpressE-ATMX-28-raw-cel-1441104826---
24.399.6GSM142850MG001_ATH1_A3-Torres-1N6GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
23.999.6GSM143308Tsu_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
22.999.6GSM143309Tsu_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
22.999.6GSM128674Underwood_1-26_hrpA-10e8-7h_Rep2_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
22.399.6GSM157358Ulker_2-1_WT-Col-0-L-MgCl2_Rep1_ATH1GSE6829Group II-A WRKY transcription factors and early leaf senescenceLink to GEO
22.399.6GSM142829GM001_ATH1_A11-Torres-5N3GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
21.799.6GSM143300Ts_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
20.699.6GSM48126Col_CSC2GSE2538Chitin Oligomer ExperimentLink to GEO
20.499.6GSM142835MG001_ATH1_A13-Torres-4N1GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
20.399.6ArrayExpressE-ATMX-28-raw-cel-1441104835---
19.799.6GSM143310Tsu_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
19.699.6GSM143301Ts_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
19.699.6GSM39212RRE2_Chitin2GSE2169rre1 and rre2 mutantsLink to GEO
19.699.6ArrayExpressE-NASC-76-raw-cel-1359878951---
19.599.6ArrayExpressE-MEXP-807-raw-cel-1173273170---
19.399.6ArrayExpressE-MEXP-807-raw-cel-1173273252---
19.299.6GSM143307Low_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
19.299.6GSM143298Low_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
19.099.5GSM253645High_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
18.599.5GSM131127AtGen_B-13_1-6-4_REP1_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
18.399.5GSM128683Underwood_1-36_E.coli-0157-H7-10e8-7h_Rep2_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
17.799.5GSM133762Lindsey_1-14_torpedo-root_Rep1_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissuesLink to GEO
17.699.5GSM128672Underwood_1-27_hrpA-10e8-7h_Rep3_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
17.199.5GSM39206Col_Chitin4GSE2169rre1 and rre2 mutantsLink to GEO
17.199.5GSM258793pvip1 pvip2 seedling biological replicate 2GSE10248Gene expression analysis of Arabidopsis pvip1 pvip2 seedlingsLink to GEO
17.199.5GSM179969Arabidopsis aux1 mutant roots, ethylene treatment, replica 1GSE7432Ethylene and auxin interactions in the roots of Arabidopsis seedlingsLink to GEO
17.199.5GSM39211RRE2_Chitin1GSE2169rre1 and rre2 mutantsLink to GEO
16.699.5GSM128682Underwood_1-35_E.coli-0157-H7-10e8-7h_Rep1_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
16.599.5GSM143302Ts_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
16.599.5GSM39205Col_Chitin3GSE2169rre1 and rre2 mutantsLink to GEO
16.399.5ArrayExpressE-MEXP-1094-raw-cel-1379507473---
16.099.5GSM142840MG001_ATH1_A1-Torres-1N1GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
15.899.5GSM39196RRE1_Chitin2GSE2169rre1 and rre2 mutantsLink to GEO
15.499.5GSM143299High_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
15.199.4GSM131141AtGen_B-27_2-6-4_REP2_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
15.199.4GSM142830GM001_ATH1_A14-Torres-4N3_repeat2GSE6176Impact of Type III effectors on plant defense responsesLink to GEO
14.199.4GSM39204Col_Chitin2GSE2169rre1 and rre2 mutantsLink to GEO
14.099.4GSM131139AtGen_B-25_2-4-4_REP2_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
14.099.4GSM143306High_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
13.799.4ArrayExpressE-MEXP-547-raw-cel-863346430---
13.399.4GSM39197RRE1_Chitin3GSE2169rre1 and rre2 mutantsLink to GEO
13.299.4GSM253648Col-0-1GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
13.199.4GSM128685Underwood_1-38_E.coli-TUV86-2-fliC-10e8-7h_Rep1_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interactionLink to GEO
12.399.3GSM131111AtGen_B-39_3-4-4_REP3_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
12.099.3GSM179960Arabidopsis roots, ethylene treatment, replica 1GSE7432Ethylene and auxin interactions in the roots of Arabidopsis seedlingsLink to GEO
12.099.3GSM258794pvip1 pvip2 seedling biological replicate 3GSE10248Gene expression analysis of Arabidopsis pvip1 pvip2 seedlingsLink to GEO
11.999.3ArrayExpressE-MEXP-807-raw-cel-1173273196---
11.799.3GSM39213RRE2_Chitin3GSE2169rre1 and rre2 mutantsLink to GEO
11.799.3GSM39203Col_Chitin1GSE2169rre1 and rre2 mutantsLink to GEO
11.699.3ArrayExpressE-MEXP-807-raw-cel-1173273144---
11.299.2GSM131329AtGen_6-3621_Saltstress-Roots-24.0h_Rep1GSE5623AtGenExpress: Stress Treatments (Salt stress)Link to GEO
11.199.2GSM179961Arabidopsis roots, ethylene treatment, replica 2GSE7432Ethylene and auxin interactions in the roots of Arabidopsis seedlingsLink to GEO
11.199.2GSM157362Ulker_2-5_WRKY-KO-40-Pst-DC3000_Rep1_ATH1GSE6829Group II-A WRKY transcription factors and early leaf senescenceLink to GEO
11.099.2ArrayExpressE-MEXP-1094-raw-cel-1379507433---
10.799.2GSM39198RRE1_Chitin4GSE2169rre1 and rre2 mutantsLink to GEO
10.399.2GSM253652Ler 2GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
10.299.2GSM48123Col_8mer2GSE2538Chitin Oligomer ExperimentLink to GEO
10.099.2ArrayExpressE-MEXP-1256-raw-cel-1502196354---
10.099.2GSM253650Ler 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
9.899.1GSM253649Col-0-2GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
9.699.1GSM184551Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
9.699.1ArrayExpressE-MEXP-1256-raw-cel-1502196418---
9.499.1GSM253651Ler 1GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
9.499.1GSM131112AtGen_B-40_3-5-4_REP3_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
9.399.1GSM131140AtGen_B-26_2-5-4_REP2_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitorsLink to GEO
9.199.1GSM131484ATGE_96_BGSE5629AtGenExpress: Developmental series (seedlings and whole plants)Link to GEO
9.099.1GSM48124Col_8mer3GSE2538Chitin Oligomer ExperimentLink to GEO
9.099.1GSM131483ATGE_96_AGSE5629AtGenExpress: Developmental series (seedlings and whole plants)Link to GEO
8.899.0GSM131485ATGE_96_CGSE5629AtGenExpress: Developmental series (seedlings and whole plants)Link to GEO
8.799.0GSM39195RRE1_Chitin1GSE2169rre1 and rre2 mutantsLink to GEO



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